| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is nucH
Identifier: 119897775
GI number: 119897775
Start: 1619180
End: 1622011
Strand: Reverse
Name: nucH
Synonym: azo1484
Alternate gene names: NA
Gene position: 1622011-1619180 (Counterclockwise)
Preceding gene: 119897777
Following gene: 119897774
Centisome position: 37.07
GC content: 71.54
Gene sequence:
>2832_bases ATGCCCCTGCTGCCCCGCCCGATCGCACTCGCGGTACTGATTGCCGGCCTTGGCGCCGCGTCGCTCGCCACCGCCGCCCC CACCGAGCTGTTCTTCTCCGAATACATCGAGGGCAGCGCCAACAACAAGGCGCTCGAAATCCATAACGGCACCGGCGCGC CGATCGACCTCGCCGCCGGCGGCTATGTGGTGCAGATGTACTTCAACGGCAGCACCACGGCCGGCCTCAGCATTCCGCTG ACCGGCGTGATCGCGGCCGGCGATGTCTTCGTGCTGGCCCAGGCCGCGGCCGATTCCGCCGTGCTGGCGGTGGCCGACCA GATCAATGCCAGCGCCTGGTACAACGGCGACGACGCCGTGGTGCTGCGCAAGGGCGGCACCACCGGCGCGCTGATCGACG TCATCGGACAGATCGGCATGGACCCGGGCACCGAGTGGGGCAGCGGTCTCGCCAGCACCGCCGACAACACCCTGCGCCGC AAGGCCGGCGTGGCGCGCGGCGACACCGTCGCGGACGACGCCTTCGACCCCGCGGTGGAATGGGACGGCTACGCCACCAA CAGCTTCGACGGCCTCGGCAGCCACCTCGCCAGCGGTAGCGACGGCGGAGGCGACGGCGGCACCGGCGGCGGCAGCGACA GTGCGCAATGCGGTGGCGCGCAAACCCCGATCGGACAGATCCAGGGCCGCGGCAGCAATGCGGCGATCACCGGCGCCGTG GTGACCCGCGGCGTGGTCGTCGGCGACTACGAGCTGCCCGGCGGCAGCGGCCAGATGCGCGGCTTCTACATTCAGGACCC GGTCGGTGACGGTGACCCCGAGACCTCGGACGGCCTCTTCGTCTACAACGCCGGGCGCGACCACGTCGCCCTCGGCGACC TCGTACTGGTCAGCGGCACCGCCAGCGAATACCAGGGCCAGACCCAGCTCTCCGCCACCGCGATCACCCGCTGCGGCACC GGCACCGTCGCACCGACCGACATCTACCTGCCGCTCGCCGACGCGAACGCGCTGGAACGCTACGAAGGCATGCTGGTGCG CCTGCCGCAAACGCTCTACGTCACCGAGCACTACCAGCTTGGCCGCTTCGGCCAGATGGTGGTGTCGAGCGGCGAGCGTC TGCCGCAGCCCACCGCGGTGGCGGCCCCCGGCGCCGCGGCGCTGGGGGTCCAGGCGCAGAACGACCTCAACCGCATCATC ATCGACGACGCCGACAACGACCAGAACCCGGACCCGATCCGCTTCGCCCGTGACGACGCACCGCTGTCGGCCGCCAACAC GCTGCGCGGCGGCGACAGCGCCAGCGACATCGTCGGCGTGCTGACCTGGGGCTGGGCGGGGAACAGCGCCAGCGGCAACG CCTGGCGCGTGCGCCCGGCCAACGCGCTCGGCGGCAACGCCCGCTTCAGCGCCGCCAACCCCCGCCCCATCGCGGCGCCG GCAGTGGCCGGCACGCTGAAAGTCGCCAGCATCAACCTGCTCAACTACTTCAACACCTTCGACGGCCGCCCGGACACGGT GGACAACTGCCGATACGGCCTCGGCGGCGCGCCCACCGACTGCCGTGGCGCCGACGACGGCGCCGAATTCGAGCGCCAGG CGGCGAAAACGGTGGCGGCCATCCTCGCGCTCGACGCCGACGTGATCGGCCTGATGGAAGTGGAGAACGACGGCTACGGC GCCGACAGCGCACTCGCCGACCTCGTCGGCCGCCTCAACGCGGTCGCCGGCCCCGGCGCCTATGCCTACCTCGACGCCGA TGCCGCCGCCGGCAAGGCGAACGCGCTCGGCACCGACGCAATCAAGACCGGCCTGATCTACCGCCCGGCCAAGGTCACGC GGCTCGGCACCGCGGTGCTGGACCGGGGCGCCTTCGGCCTCTACACCACGGTCAGCGAAGGCACCCTCGGCCGCAACCGG CCGGCGCTCGCGCAGAGCTTCCGCGCGGCCGACGGCGCGCGCTTCACCGTGGCGGTAAACCACCTCAAGTCCAAGAGTTC GTCGTGCGCCGGCAACATCGCGCCGGTGCCGTCCGACCCCGACCTGGGCGACGGCCAGGGCGACTGCAACCGCACCCGCA GCACCGCCGCGCGCGAGCTGGCGGCCTGGCTGGCGACGGACCCGACCGCGGCGGGCGACGGCGACGTGCTGATCATCGGC GACCTCAACGCCTACGCGCAGGAAGACCCGGTGACCGCGCTGACCGACGCCGGCTACACCGACCTCGTCGGCCGCGACGT TGGCCGCGGCGCCTACAGCTACGTGTTCGACGGCCAGTGGGGCTACCTCGACCACGCGCTCGCCTCGCCGTCGCTAGCCC GCCAGGTGAGCGGCGTGGCCGAGTGGCACATCAATGCCGACGAACCCTCGGTGCTCGACTACAACACCGACTACAAGAGC GCCGCCCAGATCGCCGGCTACTACGCCGCCGATCTCTATCGCGCCTCCGACCACGATCCGGTGGTGATCGGCCTCGATCT CGATGGCCAGCCGCCGCTGCTGCAGTTGTCGGCGACGCCACCAGTACTATGGCCGGCCAACCACGGCTATGTGGACGTGA AGGTCAGCGCCACGGTCTCCGATAATCGCGACCCCGCCCCGCAGGTGAAGCTGCTGTCGGTCCGCTCCAGCGAGCCGGAC CAGGGCACGGGCGACGGCGACACCGCCAACGACATCGTGGTCCTCGACCCGTACCGCTTCCGCCTGCGCGCCGAACGCGC CGGCCATGGCAGCGGGCGCATCTACACGCTGACCTACGAGGCGCGCGACTACGCCGGCAACACGCGCACCGCCACCACCA CGGTGACGGTGCCGCACTCGGCGGCGCAGTAA
Upstream 100 bases:
>100_bases CCAGCGCCGGCGGCACCGCCGAACGGCCTAAGCACCGCTTCAAGAGGGCGCAACAGTGCATCTCTACGCTCGCGGACTTC ATTCCCGAGGAATATGCAAG
Downstream 100 bases:
>100_bases GCCGGGCCCCCTACCCGCCGCCCGTTCGCGGCGGCGGGCTTCCCGCTGTTCCCCATGGAGAGAACCATGCGTTTCCCGCT CAAGACCCTCGCGCTGCTGG
Product: putative extracellular nuclease
Products: NA
Alternate protein names: Extracellular Nuclease; Nuclease; Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease I; 5-Nucleotidase Domain Protein; 5-Nucleotidase Domain-Containing Protein; Endonuclease/Exonuclease/Phosphatase Family; Extracellular Ribonuclease/Nuclease Fusion Protein; Extracellular Nuclease-Like Protein; 5-Nucleotidase; PKD Domain-Containing Protein; Exported Nuclease; Endonuclease/Exonuclease/PhosphataseEndonuclease I; Outer Membrane Adhesin Like Proteiin; Extracellular Ribonuclease; LPXTG-Motif Cell Wall Anchor Domain Protein; Calcineurin-Like Phosphoesterase; Extracellular Nuclease-Like; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Xylanase A; DNA/RNA Non-Specific Endonuclease; Extracellular Nuclease/Phosphatase; 5-Nucleotidase Family Protein
Number of amino acids: Translated: 943; Mature: 942
Protein sequence:
>943_residues MPLLPRPIALAVLIAGLGAASLATAAPTELFFSEYIEGSANNKALEIHNGTGAPIDLAAGGYVVQMYFNGSTTAGLSIPL TGVIAAGDVFVLAQAAADSAVLAVADQINASAWYNGDDAVVLRKGGTTGALIDVIGQIGMDPGTEWGSGLASTADNTLRR KAGVARGDTVADDAFDPAVEWDGYATNSFDGLGSHLASGSDGGGDGGTGGGSDSAQCGGAQTPIGQIQGRGSNAAITGAV VTRGVVVGDYELPGGSGQMRGFYIQDPVGDGDPETSDGLFVYNAGRDHVALGDLVLVSGTASEYQGQTQLSATAITRCGT GTVAPTDIYLPLADANALERYEGMLVRLPQTLYVTEHYQLGRFGQMVVSSGERLPQPTAVAAPGAAALGVQAQNDLNRII IDDADNDQNPDPIRFARDDAPLSAANTLRGGDSASDIVGVLTWGWAGNSASGNAWRVRPANALGGNARFSAANPRPIAAP AVAGTLKVASINLLNYFNTFDGRPDTVDNCRYGLGGAPTDCRGADDGAEFERQAAKTVAAILALDADVIGLMEVENDGYG ADSALADLVGRLNAVAGPGAYAYLDADAAAGKANALGTDAIKTGLIYRPAKVTRLGTAVLDRGAFGLYTTVSEGTLGRNR PALAQSFRAADGARFTVAVNHLKSKSSSCAGNIAPVPSDPDLGDGQGDCNRTRSTAARELAAWLATDPTAAGDGDVLIIG DLNAYAQEDPVTALTDAGYTDLVGRDVGRGAYSYVFDGQWGYLDHALASPSLARQVSGVAEWHINADEPSVLDYNTDYKS AAQIAGYYAADLYRASDHDPVVIGLDLDGQPPLLQLSATPPVLWPANHGYVDVKVSATVSDNRDPAPQVKLLSVRSSEPD QGTGDGDTANDIVVLDPYRFRLRAERAGHGSGRIYTLTYEARDYAGNTRTATTTVTVPHSAAQ
Sequences:
>Translated_943_residues MPLLPRPIALAVLIAGLGAASLATAAPTELFFSEYIEGSANNKALEIHNGTGAPIDLAAGGYVVQMYFNGSTTAGLSIPL TGVIAAGDVFVLAQAAADSAVLAVADQINASAWYNGDDAVVLRKGGTTGALIDVIGQIGMDPGTEWGSGLASTADNTLRR KAGVARGDTVADDAFDPAVEWDGYATNSFDGLGSHLASGSDGGGDGGTGGGSDSAQCGGAQTPIGQIQGRGSNAAITGAV VTRGVVVGDYELPGGSGQMRGFYIQDPVGDGDPETSDGLFVYNAGRDHVALGDLVLVSGTASEYQGQTQLSATAITRCGT GTVAPTDIYLPLADANALERYEGMLVRLPQTLYVTEHYQLGRFGQMVVSSGERLPQPTAVAAPGAAALGVQAQNDLNRII IDDADNDQNPDPIRFARDDAPLSAANTLRGGDSASDIVGVLTWGWAGNSASGNAWRVRPANALGGNARFSAANPRPIAAP AVAGTLKVASINLLNYFNTFDGRPDTVDNCRYGLGGAPTDCRGADDGAEFERQAAKTVAAILALDADVIGLMEVENDGYG ADSALADLVGRLNAVAGPGAYAYLDADAAAGKANALGTDAIKTGLIYRPAKVTRLGTAVLDRGAFGLYTTVSEGTLGRNR PALAQSFRAADGARFTVAVNHLKSKSSSCAGNIAPVPSDPDLGDGQGDCNRTRSTAARELAAWLATDPTAAGDGDVLIIG DLNAYAQEDPVTALTDAGYTDLVGRDVGRGAYSYVFDGQWGYLDHALASPSLARQVSGVAEWHINADEPSVLDYNTDYKS AAQIAGYYAADLYRASDHDPVVIGLDLDGQPPLLQLSATPPVLWPANHGYVDVKVSATVSDNRDPAPQVKLLSVRSSEPD QGTGDGDTANDIVVLDPYRFRLRAERAGHGSGRIYTLTYEARDYAGNTRTATTTVTVPHSAAQ >Mature_942_residues PLLPRPIALAVLIAGLGAASLATAAPTELFFSEYIEGSANNKALEIHNGTGAPIDLAAGGYVVQMYFNGSTTAGLSIPLT GVIAAGDVFVLAQAAADSAVLAVADQINASAWYNGDDAVVLRKGGTTGALIDVIGQIGMDPGTEWGSGLASTADNTLRRK AGVARGDTVADDAFDPAVEWDGYATNSFDGLGSHLASGSDGGGDGGTGGGSDSAQCGGAQTPIGQIQGRGSNAAITGAVV TRGVVVGDYELPGGSGQMRGFYIQDPVGDGDPETSDGLFVYNAGRDHVALGDLVLVSGTASEYQGQTQLSATAITRCGTG TVAPTDIYLPLADANALERYEGMLVRLPQTLYVTEHYQLGRFGQMVVSSGERLPQPTAVAAPGAAALGVQAQNDLNRIII DDADNDQNPDPIRFARDDAPLSAANTLRGGDSASDIVGVLTWGWAGNSASGNAWRVRPANALGGNARFSAANPRPIAAPA VAGTLKVASINLLNYFNTFDGRPDTVDNCRYGLGGAPTDCRGADDGAEFERQAAKTVAAILALDADVIGLMEVENDGYGA DSALADLVGRLNAVAGPGAYAYLDADAAAGKANALGTDAIKTGLIYRPAKVTRLGTAVLDRGAFGLYTTVSEGTLGRNRP ALAQSFRAADGARFTVAVNHLKSKSSSCAGNIAPVPSDPDLGDGQGDCNRTRSTAARELAAWLATDPTAAGDGDVLIIGD LNAYAQEDPVTALTDAGYTDLVGRDVGRGAYSYVFDGQWGYLDHALASPSLARQVSGVAEWHINADEPSVLDYNTDYKSA AQIAGYYAADLYRASDHDPVVIGLDLDGQPPLLQLSATPPVLWPANHGYVDVKVSATVSDNRDPAPQVKLLSVRSSEPDQ GTGDGDTANDIVVLDPYRFRLRAERAGHGSGRIYTLTYEARDYAGNTRTATTTVTVPHSAAQ
Specific function: Unknown
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97093; Mature: 96962
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLPRPIALAVLIAGLGAASLATAAPTELFFSEYIEGSANNKALEIHNGTGAPIDLAAG CCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECC GYVVQMYFNGSTTAGLSIPLTGVIAAGDVFVLAQAAADSAVLAVADQINASAWYNGDDAV CEEEEEEECCCCCCCEEECEEEEEECCCEEEEEECCCCCEEEEEEHHCCCCEEECCCCEE VLRKGGTTGALIDVIGQIGMDPGTEWGSGLASTADNTLRRKAGVARGDTVADDAFDPAVE EEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WDGYATNSFDGLGSHLASGSDGGGDGGTGGGSDSAQCGGAQTPIGQIQGRGSNAAITGAV CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEE VTRGVVVGDYELPGGSGQMRGFYIQDPVGDGDPETSDGLFVYNAGRDHVALGDLVLVSGT HCCCEEEECEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCEEEEECC ASEYQGQTQLSATAITRCGTGTVAPTDIYLPLADANALERYEGMLVRLPQTLYVTEHYQL HHHHCCCCEEEHHHHHCCCCCCCCCCEEEEEECCCHHHHHHCCEEEECCCEEEEECCCCC GRFGQMVVSSGERLPQPTAVAAPGAAALGVQAQNDLNRIIIDDADNDQNPDPIRFARDDA CHHHHHHHHCCCCCCCCCEECCCCCCEEEEECCCCCCEEEEECCCCCCCCCCEEEECCCC PLSAANTLRGGDSASDIVGVLTWGWAGNSASGNAWRVRPANALGGNARFSAANPRPIAAP CCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCC AVAGTLKVASINLLNYFNTFDGRPDTVDNCRYGLGGAPTDCRGADDGAEFERQAAKTVAA HHHCEEEEEEEEEEHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ILALDADVIGLMEVENDGYGADSALADLVGRLNAVAGPGAYAYLDADAAAGKANALGTDA HHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHH IKTGLIYRPAKVTRLGTAVLDRGAFGLYTTVSEGTLGRNRPALAQSFRAADGARFTVAVN HHCCEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEEE HLKSKSSSCAGNIAPVPSDPDLGDGQGDCNRTRSTAARELAAWLATDPTAAGDGDVLIIG CHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE DLNAYAQEDPVTALTDAGYTDLVGRDVGRGAYSYVFDGQWGYLDHALASPSLARQVSGVA CCCCCCCCCCCEEEECCCCHHHHCCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHCCCE EWHINADEPSVLDYNTDYKSAAQIAGYYAADLYRASDHDPVVIGLDLDGQPPLLQLSATP EEEECCCCCCEEECCCCHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCEEEEECCC PVLWPANHGYVDVKVSATVSDNRDPAPQVKLLSVRSSEPDQGTGDGDTANDIVVLDPYRF CEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCEE RLRAERAGHGSGRIYTLTYEARDYAGNTRTATTTVTVPHSAAQ EEEECCCCCCCCEEEEEEEECHHCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure PLLPRPIALAVLIAGLGAASLATAAPTELFFSEYIEGSANNKALEIHNGTGAPIDLAAG CCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECC GYVVQMYFNGSTTAGLSIPLTGVIAAGDVFVLAQAAADSAVLAVADQINASAWYNGDDAV CEEEEEEECCCCCCCEEECEEEEEECCCEEEEEECCCCCEEEEEEHHCCCCEEECCCCEE VLRKGGTTGALIDVIGQIGMDPGTEWGSGLASTADNTLRRKAGVARGDTVADDAFDPAVE EEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WDGYATNSFDGLGSHLASGSDGGGDGGTGGGSDSAQCGGAQTPIGQIQGRGSNAAITGAV CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEE VTRGVVVGDYELPGGSGQMRGFYIQDPVGDGDPETSDGLFVYNAGRDHVALGDLVLVSGT HCCCEEEECEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCEEEEECC ASEYQGQTQLSATAITRCGTGTVAPTDIYLPLADANALERYEGMLVRLPQTLYVTEHYQL HHHHCCCCEEEHHHHHCCCCCCCCCCEEEEEECCCHHHHHHCCEEEECCCEEEEECCCCC GRFGQMVVSSGERLPQPTAVAAPGAAALGVQAQNDLNRIIIDDADNDQNPDPIRFARDDA CHHHHHHHHCCCCCCCCCEECCCCCCEEEEECCCCCCEEEEECCCCCCCCCCEEEECCCC PLSAANTLRGGDSASDIVGVLTWGWAGNSASGNAWRVRPANALGGNARFSAANPRPIAAP CCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCC AVAGTLKVASINLLNYFNTFDGRPDTVDNCRYGLGGAPTDCRGADDGAEFERQAAKTVAA HHHCEEEEEEEEEEHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ILALDADVIGLMEVENDGYGADSALADLVGRLNAVAGPGAYAYLDADAAAGKANALGTDA HHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHH IKTGLIYRPAKVTRLGTAVLDRGAFGLYTTVSEGTLGRNRPALAQSFRAADGARFTVAVN HHCCEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEEE HLKSKSSSCAGNIAPVPSDPDLGDGQGDCNRTRSTAARELAAWLATDPTAAGDGDVLIIG CHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE DLNAYAQEDPVTALTDAGYTDLVGRDVGRGAYSYVFDGQWGYLDHALASPSLARQVSGVA CCCCCCCCCCCEEEECCCCHHHHCCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHCCCE EWHINADEPSVLDYNTDYKSAAQIAGYYAADLYRASDHDPVVIGLDLDGQPPLLQLSATP EEEECCCCCCEEECCCCHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCEEEEECCC PVLWPANHGYVDVKVSATVSDNRDPAPQVKLLSVRSSEPDQGTGDGDTANDIVVLDPYRF CEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCEE RLRAERAGHGSGRIYTLTYEARDYAGNTRTATTTVTVPHSAAQ EEEECCCCCCCCEEEEEEEECHHCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA