| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
Click here to switch to the map view.
The map label for this gene is 119897772
Identifier: 119897772
GI number: 119897772
Start: 1614063
End: 1615001
Strand: Reverse
Name: 119897772
Synonym: azo1481
Alternate gene names: NA
Gene position: 1615001-1614063 (Counterclockwise)
Preceding gene: 119897773
Following gene: 119897771
Centisome position: 36.91
GC content: 69.33
Gene sequence:
>939_bases ATGGATGCCATCCCGTTCTTCTTCCTGCTCGGCTTCGTTGCCCGCCTCGCCCGCTCGGACCTGAAACTGCCCGGTCAACT GTACGAGGCCCTCTCCATCTACCTGCTGCTCGCCATCGGCCTCAAGGGCGGCATGGAACTCGCCAAGCAGGACCCGCTGC AGGTGCTGCCTCAGGCGCTGGCGGTGCTGGCGCTGGGTGCGGCGATTCCGCTGGTGGCCTTCCCCATCCTGCGCCGGCTG GGCCGCTTCGACCGCTACAACGCCGCGGCGATCGCCGGCCACTACGGCTCGGTCAGCGTGGTCACGTTCGCGGTCGGCGT GGATTACCTCACCGCGCGCAGCATCCCCTACGAAGCCTACCTGCCGCTGTTCCTGGTGCTGCTGGAGATGCCCGGCATCG TGGTCGGCATCCTGCTCGCCCGCCTCGGCGGCGAAGGCGGCAAGGTACGGTGGGGGCCGCTGCTGCACGAAATCTTCCTC GGCAAGAGCATGGTGCTGCTCGCCGGCGGCCTGATCATCGGCTGGGTGGCCGGGCCGAAGGGCCTGGTGCCGCTCGAACC CTTCTTCTTCACGCTGTTCAAGGGTGTGCTGTGCCTGTTCCTGCTGGAGATGGGCCTGGTCGCGGCCGGACAGGCCGGCG CGCTGCGCACCAGCGGCGCCTTCCTGGTCGGCTTCGCGCTGGCGATGCCGGTGATCGGCGCCACGCTCGGCAGCGTGCTC GGCGTGGCGATCGGCCTGTCGCTGGGCGGCACGCTGCTGCTCGCCACGCTGGCAGCCAGCGCCTCCTACATCGCGGCACC GGCGGCGATGCGGATCGCGGTGCCGGAGGCCAACCCGGGGCTGTCGATCACCGCGGCGCTGGTGATCACCTTCCCCTTCA ACATCCTGCTCGGGATTCCGCTCTACGAACGGATCGCGGGCTTCATCCACGGGAGCTGA
Upstream 100 bases:
>100_bases CTCGATCCCGCCCGCTTCCTGCTGCGCCCCGCACGAACGCTGCGCGGCGAGGACTGACGGCCGGCCACCACCCAGAATTC ATTACCGCTGCTGACACCTC
Downstream 100 bases:
>100_bases GCATGCCCAACACCCATCCCTGCAAACTCGTTGTGATCATCGCCGAAGAGGCGCTGGAAGGCCCGCTGGCGAAGGATGTG ATGGCGCTCGGCGCGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; SBT Type Permease Sodium-Bicarbonate; Conserved Domain Protein; Permease-Like Protein; Domain Transmembrane Protein
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MDAIPFFFLLGFVARLARSDLKLPGQLYEALSIYLLLAIGLKGGMELAKQDPLQVLPQALAVLALGAAIPLVAFPILRRL GRFDRYNAAAIAGHYGSVSVVTFAVGVDYLTARSIPYEAYLPLFLVLLEMPGIVVGILLARLGGEGGKVRWGPLLHEIFL GKSMVLLAGGLIIGWVAGPKGLVPLEPFFFTLFKGVLCLFLLEMGLVAAGQAGALRTSGAFLVGFALAMPVIGATLGSVL GVAIGLSLGGTLLLATLAASASYIAAPAAMRIAVPEANPGLSITAALVITFPFNILLGIPLYERIAGFIHGS
Sequences:
>Translated_312_residues MDAIPFFFLLGFVARLARSDLKLPGQLYEALSIYLLLAIGLKGGMELAKQDPLQVLPQALAVLALGAAIPLVAFPILRRL GRFDRYNAAAIAGHYGSVSVVTFAVGVDYLTARSIPYEAYLPLFLVLLEMPGIVVGILLARLGGEGGKVRWGPLLHEIFL GKSMVLLAGGLIIGWVAGPKGLVPLEPFFFTLFKGVLCLFLLEMGLVAAGQAGALRTSGAFLVGFALAMPVIGATLGSVL GVAIGLSLGGTLLLATLAASASYIAAPAAMRIAVPEANPGLSITAALVITFPFNILLGIPLYERIAGFIHGS >Mature_312_residues MDAIPFFFLLGFVARLARSDLKLPGQLYEALSIYLLLAIGLKGGMELAKQDPLQVLPQALAVLALGAAIPLVAFPILRRL GRFDRYNAAAIAGHYGSVSVVTFAVGVDYLTARSIPYEAYLPLFLVLLEMPGIVVGILLARLGGEGGKVRWGPLLHEIFL GKSMVLLAGGLIIGWVAGPKGLVPLEPFFFTLFKGVLCLFLLEMGLVAAGQAGALRTSGAFLVGFALAMPVIGATLGSVL GVAIGLSLGGTLLLATLAASASYIAAPAAMRIAVPEANPGLSITAALVITFPFNILLGIPLYERIAGFIHGS
Specific function: Unknown
COG id: COG3329
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32495; Mature: 32495
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAIPFFFLLGFVARLARSDLKLPGQLYEALSIYLLLAIGLKGGMELAKQDPLQVLPQAL CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH AVLALGAAIPLVAFPILRRLGRFDRYNAAAIAGHYGSVSVVTFAVGVDYLTARSIPYEAY HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECCCCCHHHHHHHHHHHHHHHCCCCHHHH LPLFLVLLEMPGIVVGILLARLGGEGGKVRWGPLLHEIFLGKSMVLLAGGLIIGWVAGPK HHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCHHHHHHCCHHEEEECCCC GLVPLEPFFFTLFKGVLCLFLLEMGLVAAGQAGALRTSGAFLVGFALAMPVIGATLGSVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GVAIGLSLGGTLLLATLAASASYIAAPAAMRIAVPEANPGLSITAALVITFPFNILLGIP HHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC LYERIAGFIHGS HHHHHHHHHCCC >Mature Secondary Structure MDAIPFFFLLGFVARLARSDLKLPGQLYEALSIYLLLAIGLKGGMELAKQDPLQVLPQAL CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH AVLALGAAIPLVAFPILRRLGRFDRYNAAAIAGHYGSVSVVTFAVGVDYLTARSIPYEAY HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECCCCCHHHHHHHHHHHHHHHCCCCHHHH LPLFLVLLEMPGIVVGILLARLGGEGGKVRWGPLLHEIFLGKSMVLLAGGLIIGWVAGPK HHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCHHHHHHCCHHEEEECCCC GLVPLEPFFFTLFKGVLCLFLLEMGLVAAGQAGALRTSGAFLVGFALAMPVIGATLGSVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GVAIGLSLGGTLLLATLAASASYIAAPAAMRIAVPEANPGLSITAALVITFPFNILLGIP HHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC LYERIAGFIHGS HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA