| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119897598
Identifier: 119897598
GI number: 119897598
Start: 1423911
End: 1426628
Strand: Direct
Name: 119897598
Synonym: azo1307
Alternate gene names: NA
Gene position: 1423911-1426628 (Clockwise)
Preceding gene: 119897597
Following gene: 119897599
Centisome position: 32.54
GC content: 69.57
Gene sequence:
>2718_bases GTGACCGACTCGCTTCGATCCGCTGCCGCCGACCTGTTGTCGGTGGCAGACGCTATTTCATTCCTGCCGGCGACGCGTCT GGTCGAACTGCGGTTCGCCGGTGGCGGCCCAGAAGGCAGCCCCTTGATCGCATTGAGTGCCTATGGCGAGGAGGGGCTCA ACATGTGCCACCGGATCACGGTGCGCTGCGTCGCCGTGGACGCACGGATCGAGCTGATAACCATGCTCGGCCTGCGCGCG GCGATCGGGATCCGCACCGCGGACGGACGGGAGCGGATTCGATGCGGGGTGGTGACCGCGGGGGTTGCACTCGGTGCCGA CGGCGGCTTTGCAGCTTACGAGATCACGGTGGAGCCGCCACTCGCGCTGTTGCGCCACCGGTGGGGCAGCAGGGTGTTTC AGGCGCTGACCGTGCCGGAGATCGTCCGGGCCCTGGTTGAGGAACACCGGGGTCGCAACCCCATCTTCAATGCCGGCCTG GGGCTACGCTTCGATCTCCAGCGCCGCTACGAGTGCCGCTCCTACTGCGTGCAGTATCACGAGTCCGACCTCGAGTTCAT CGAACGCCTGCTCGCGGAAGAGGGCATCGGCTGGCGCTTCGACCACGAAGAGGACGCAGCGGGGGCCGGGCCCTCGACCC TGTTGGTGCTGTTTGACGCCGCAGACAGTCTCCCGCCCGCGGAGCCCCCATCGGTCCGCTTCCACCGCGGCAACGCCAGC GAAACAGAGGACAGCCTCACCTCGTGGTCGGCCCAGCGCAGCGTCGGCGCCGGGCGCACGACGCTGACCAGTTTCGACTA CAAGCCCGCCGCTACTACCACCGCGCGTGCCGAGGGCGTGGAAGAAGATGGGGGCGACGCCACTTCGCTCGAGCAGGCGC TGGAGGATTTCCGGCCGCAGACCCTGCACTATGCGCCCACGGTCGATGGCCTCGCCGCATACGCGGCACTCCGCCAGCAG GCGCGGGATGCGGAGCGCAATACCTTCGAGGCGGACGGGGATGCGCGTGGGCTGACGGCAGGGGCGTGGTTCCAGCTGGA GGGGCACCCGCGCCACGAGCATGAACCGGGCGAAGAACGTCGCTTCGTGGTGACGCGCCTGACGTTCGTTGCGCGCAGCA ATCTTCCCGTCCATTCGTCGCTGATCGACGCGGCGGGCGAGGGCCGCGCCTGGGCAGGGGCCGGAAAGACGCCTTATCAG ATCCGGCTGACGGCGGTGCGTCGGGGGCAGGCGTCTGCCGGCATCTTTCCGCCGCGTCGCGACCTGCGCCCCACCGCCCG CGGGCCTCAGAGCGCAATCGTGGTCGGGCCGCATGACGAAGAGGTTCACACCGACGAGTACGGCCGCATTCGCATCCAGT TCCACTGGCAGCGGCAGGAAGATCACCCGGACGGCGGAGCCGCTTACGACGAGCGTTCCTCCTGCTGGGTGCGCGTCGCG CTGCCCAGCGCGGGCATCGCCTGGGGGCATCAGTTCATTCCGCGCGTCGGCCAGGAGGTCCTGGTGGATTTCCTTGACGG CGACATCGACCGGCCGGTGGTGACCGGCGTGCTGGGCAACGGGTGTCACCCTCCGGTCCGCTTTTCCGGGGTCGGCGCGC TGCCCGCCAACAAGGCTCTGTCCGGGATCAAGTCGCGGGAGCACGGCGGCGCGGGCTTCAACGAGCTGGTGTTCGACGAC ACGGCGGGGCAACTGCGGGCACGGCTGAGCACGGAACACGCAGCGACGCAGCTGAACCTCGGCTGCCTTGTCCATCCCCG CGAAAACGGGCAGGCGACGGTCCGGGGTGACGGGGCAGAGCTGCGTACCGACGGCGCTGCCGCGGTTCGGGGTGCCCGCG GCGTGCTGGTGAGTGCGCATGGACGGCCGCGCGCTGCCGGCAGCCAGCTGGCACGGGAAGAGTTGATGGAACTGCTGGAG CAGGCGCGCGAACTCGCGCGCACGCTGTCCGATTACGCGGGCAGCCACCAGGGCGTTCCTGCCGAGAGCAGTGGCGCCGA CGCGCTGCTGCAGGCAGTGCGTCAATGGGATGGGGATCGCGCCGAGGGTGCAGACCGGGAGCGCGGTGACGGACTCGTTT GCGCGGCCGCGCCCGAGGGGATCGTGATTGCGACCGGTGCGACGCTGATCAGTTGCGCGGCCGAGGATCACGAGGTCTGT GCCAGCCACCAGCTCCGGCTGACCGCAGGGGAAGGCTTGGTAGCGAATGCGGGCGCCGGCATCGGGCTCTTCGCCCAGTC GGGCGACCTGCGCTCGATCGCACATCAGGGCCTGCATCTGACCCAGGCCCAGCAGGGCGACGTGGTGACCGAAGCCGCCC GCAACGTCCGCGTTTCCGCGGCCGAAGGTGAAGTCCTGATCAGCGCGCCGGTAATCCGGCTCGTGGCCCAGGACGGCTCC TTCCTCCGGTTGGGAGGCGGCATCGCGCTGGGAACCGAAGGTGCGGTGCAGGTCAAGGCCGCGCGCCACAGCTTGGGCGG TCCCGCCACCGACAGCATTGATCTGCCGGTCTTCGACCGTGCCGGCGCCGACCAGCGCTTCGCGTTGCTCTACCCCGGCG CCGAGGGTGCGGAGCCGCAGCCTGCCGGCGGACGGCGATACGAGATCACGCTGAAGGATGGGCGCGTCGTGGCCGGCACT GCCGACGCCGAGGGCAGGACCGACATGCTGACGAGCGAGGCCATGCAGGTGGCCCACATCCGTGTCTTCGACCGCTGA
Upstream 100 bases:
>100_bases GCACCGAGGATGGCACCCACGCGGTGGTGCTGCGCGTGAACTAGGCCCCAGGGGCGGGTTGGCTCGCCCTTGTCTCCGTC TTTCCCAATCGGATTTCCAG
Downstream 100 bases:
>100_bases GCCCCCATGTTCGACGAACTGTTGCGCTACTACGAAACCGAACTCGGCTACCTGCGCGAACTCTCGGGCGAGTTCGCGCG CCGTTACCCGAAGATCGCCG
Product: Vgr related protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs Element Vgr Family; VGR-Like Protein; Rhs-Family Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Replication/Virulence Associated Protein; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Type VI Secretion System Effector Protein VgrS; Rhs Family Protein; VgrG Protein; Rhs Element Vgr-Related Protein; VgrG Family T6SS G
Number of amino acids: Translated: 905; Mature: 904
Protein sequence:
>905_residues MTDSLRSAAADLLSVADAISFLPATRLVELRFAGGGPEGSPLIALSAYGEEGLNMCHRITVRCVAVDARIELITMLGLRA AIGIRTADGRERIRCGVVTAGVALGADGGFAAYEITVEPPLALLRHRWGSRVFQALTVPEIVRALVEEHRGRNPIFNAGL GLRFDLQRRYECRSYCVQYHESDLEFIERLLAEEGIGWRFDHEEDAAGAGPSTLLVLFDAADSLPPAEPPSVRFHRGNAS ETEDSLTSWSAQRSVGAGRTTLTSFDYKPAATTTARAEGVEEDGGDATSLEQALEDFRPQTLHYAPTVDGLAAYAALRQQ ARDAERNTFEADGDARGLTAGAWFQLEGHPRHEHEPGEERRFVVTRLTFVARSNLPVHSSLIDAAGEGRAWAGAGKTPYQ IRLTAVRRGQASAGIFPPRRDLRPTARGPQSAIVVGPHDEEVHTDEYGRIRIQFHWQRQEDHPDGGAAYDERSSCWVRVA LPSAGIAWGHQFIPRVGQEVLVDFLDGDIDRPVVTGVLGNGCHPPVRFSGVGALPANKALSGIKSREHGGAGFNELVFDD TAGQLRARLSTEHAATQLNLGCLVHPRENGQATVRGDGAELRTDGAAAVRGARGVLVSAHGRPRAAGSQLAREELMELLE QARELARTLSDYAGSHQGVPAESSGADALLQAVRQWDGDRAEGADRERGDGLVCAAAPEGIVIATGATLISCAAEDHEVC ASHQLRLTAGEGLVANAGAGIGLFAQSGDLRSIAHQGLHLTQAQQGDVVTEAARNVRVSAAEGEVLISAPVIRLVAQDGS FLRLGGGIALGTEGAVQVKAARHSLGGPATDSIDLPVFDRAGADQRFALLYPGAEGAEPQPAGGRRYEITLKDGRVVAGT ADAEGRTDMLTSEAMQVAHIRVFDR
Sequences:
>Translated_905_residues MTDSLRSAAADLLSVADAISFLPATRLVELRFAGGGPEGSPLIALSAYGEEGLNMCHRITVRCVAVDARIELITMLGLRA AIGIRTADGRERIRCGVVTAGVALGADGGFAAYEITVEPPLALLRHRWGSRVFQALTVPEIVRALVEEHRGRNPIFNAGL GLRFDLQRRYECRSYCVQYHESDLEFIERLLAEEGIGWRFDHEEDAAGAGPSTLLVLFDAADSLPPAEPPSVRFHRGNAS ETEDSLTSWSAQRSVGAGRTTLTSFDYKPAATTTARAEGVEEDGGDATSLEQALEDFRPQTLHYAPTVDGLAAYAALRQQ ARDAERNTFEADGDARGLTAGAWFQLEGHPRHEHEPGEERRFVVTRLTFVARSNLPVHSSLIDAAGEGRAWAGAGKTPYQ IRLTAVRRGQASAGIFPPRRDLRPTARGPQSAIVVGPHDEEVHTDEYGRIRIQFHWQRQEDHPDGGAAYDERSSCWVRVA LPSAGIAWGHQFIPRVGQEVLVDFLDGDIDRPVVTGVLGNGCHPPVRFSGVGALPANKALSGIKSREHGGAGFNELVFDD TAGQLRARLSTEHAATQLNLGCLVHPRENGQATVRGDGAELRTDGAAAVRGARGVLVSAHGRPRAAGSQLAREELMELLE QARELARTLSDYAGSHQGVPAESSGADALLQAVRQWDGDRAEGADRERGDGLVCAAAPEGIVIATGATLISCAAEDHEVC ASHQLRLTAGEGLVANAGAGIGLFAQSGDLRSIAHQGLHLTQAQQGDVVTEAARNVRVSAAEGEVLISAPVIRLVAQDGS FLRLGGGIALGTEGAVQVKAARHSLGGPATDSIDLPVFDRAGADQRFALLYPGAEGAEPQPAGGRRYEITLKDGRVVAGT ADAEGRTDMLTSEAMQVAHIRVFDR >Mature_904_residues TDSLRSAAADLLSVADAISFLPATRLVELRFAGGGPEGSPLIALSAYGEEGLNMCHRITVRCVAVDARIELITMLGLRAA IGIRTADGRERIRCGVVTAGVALGADGGFAAYEITVEPPLALLRHRWGSRVFQALTVPEIVRALVEEHRGRNPIFNAGLG LRFDLQRRYECRSYCVQYHESDLEFIERLLAEEGIGWRFDHEEDAAGAGPSTLLVLFDAADSLPPAEPPSVRFHRGNASE TEDSLTSWSAQRSVGAGRTTLTSFDYKPAATTTARAEGVEEDGGDATSLEQALEDFRPQTLHYAPTVDGLAAYAALRQQA RDAERNTFEADGDARGLTAGAWFQLEGHPRHEHEPGEERRFVVTRLTFVARSNLPVHSSLIDAAGEGRAWAGAGKTPYQI RLTAVRRGQASAGIFPPRRDLRPTARGPQSAIVVGPHDEEVHTDEYGRIRIQFHWQRQEDHPDGGAAYDERSSCWVRVAL PSAGIAWGHQFIPRVGQEVLVDFLDGDIDRPVVTGVLGNGCHPPVRFSGVGALPANKALSGIKSREHGGAGFNELVFDDT AGQLRARLSTEHAATQLNLGCLVHPRENGQATVRGDGAELRTDGAAAVRGARGVLVSAHGRPRAAGSQLAREELMELLEQ ARELARTLSDYAGSHQGVPAESSGADALLQAVRQWDGDRAEGADRERGDGLVCAAAPEGIVIATGATLISCAAEDHEVCA SHQLRLTAGEGLVANAGAGIGLFAQSGDLRSIAHQGLHLTQAQQGDVVTEAARNVRVSAAEGEVLISAPVIRLVAQDGSF LRLGGGIALGTEGAVQVKAARHSLGGPATDSIDLPVFDRAGADQRFALLYPGAEGAEPQPAGGRRYEITLKDGRVVAGTA DAEGRTDMLTSEAMQVAHIRVFDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96408; Mature: 96277
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSLRSAAADLLSVADAISFLPATRLVELRFAGGGPEGSPLIALSAYGEEGLNMCHRIT CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHEEE VRCVAVDARIELITMLGLRAAIGIRTADGRERIRCGVVTAGVALGADGGFAAYEITVEPP EEEEEECCHHHHHHHHHHHHHHEEEECCCHHHEEEEEEEECEEECCCCCEEEEEEEECCH LALLRHRWGSRVFQALTVPEIVRALVEEHRGRNPIFNAGLGLRFDLQRRYECRSYCVQYH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEHHHHHHHHHHHHHHC ESDLEFIERLLAEEGIGWRFDHEEDAAGAGPSTLLVLFDAADSLPPAEPPSVRFHRGNAS CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCC ETEDSLTSWSAQRSVGAGRTTLTSFDYKPAATTTARAEGVEEDGGDATSLEQALEDFRPQ CCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCC TLHYAPTVDGLAAYAALRQQARDAERNTFEADGDARGLTAGAWFQLEGHPRHEHEPGEER EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECEEEEECCCCCCCCCCCCHH RFVVTRLTFVARSNLPVHSSLIDAAGEGRAWAGAGKTPYQIRLTAVRRGQASAGIFPPRR EEEEEEEEEHHCCCCCCHHHHHHCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCCCC DLRPTARGPQSAIVVGPHDEEVHTDEYGRIRIQFHWQRQEDHPDGGAAYDERSSCWVRVA CCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEE LPSAGIAWGHQFIPRVGQEVLVDFLDGDIDRPVVTGVLGNGCHPPVRFSGVGALPANKAL ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEECCCCCCCHHHHH SGIKSREHGGAGFNELVFDDTAGQLRARLSTEHAATQLNLGCLVHPRENGQATVRGDGAE HHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHEECCCEEEEECCCCCEEEECCCCE LRTDGAAAVRGARGVLVSAHGRPRAAGSQLAREELMELLEQARELARTLSDYAGSHQGVP ECCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AESSGADALLQAVRQWDGDRAEGADRERGDGLVCAAAPEGIVIATGATLISCAAEDHEVC CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCHHHH ASHQLRLTAGEGLVANAGAGIGLFAQSGDLRSIAHQGLHLTQAQQGDVVTEAARNVRVSA CCCEEEEEECCCEEEECCCCEEEEECCCCHHHHHHCCCEEECCCCCCHHHHHHHCEEEEE AEGEVLISAPVIRLVAQDGSFLRLGGGIALGTEGAVQVKAARHSLGGPATDSIDLPVFDR CCCCEEEECCEEEEEECCCCEEEECCCEEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCC AGADQRFALLYPGAEGAEPQPAGGRRYEITLKDGRVVAGTADAEGRTDMLTSEAMQVAHI CCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHEEEE RVFDR EEECC >Mature Secondary Structure TDSLRSAAADLLSVADAISFLPATRLVELRFAGGGPEGSPLIALSAYGEEGLNMCHRIT CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHEEE VRCVAVDARIELITMLGLRAAIGIRTADGRERIRCGVVTAGVALGADGGFAAYEITVEPP EEEEEECCHHHHHHHHHHHHHHEEEECCCHHHEEEEEEEECEEECCCCCEEEEEEEECCH LALLRHRWGSRVFQALTVPEIVRALVEEHRGRNPIFNAGLGLRFDLQRRYECRSYCVQYH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEHHHHHHHHHHHHHHC ESDLEFIERLLAEEGIGWRFDHEEDAAGAGPSTLLVLFDAADSLPPAEPPSVRFHRGNAS CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCC ETEDSLTSWSAQRSVGAGRTTLTSFDYKPAATTTARAEGVEEDGGDATSLEQALEDFRPQ CCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCC TLHYAPTVDGLAAYAALRQQARDAERNTFEADGDARGLTAGAWFQLEGHPRHEHEPGEER EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECEEEEECCCCCCCCCCCCHH RFVVTRLTFVARSNLPVHSSLIDAAGEGRAWAGAGKTPYQIRLTAVRRGQASAGIFPPRR EEEEEEEEEHHCCCCCCHHHHHHCCCCCCEECCCCCCCEEEEEEEEECCCCCCCCCCCCC DLRPTARGPQSAIVVGPHDEEVHTDEYGRIRIQFHWQRQEDHPDGGAAYDERSSCWVRVA CCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEE LPSAGIAWGHQFIPRVGQEVLVDFLDGDIDRPVVTGVLGNGCHPPVRFSGVGALPANKAL ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEECCCCCCCHHHHH SGIKSREHGGAGFNELVFDDTAGQLRARLSTEHAATQLNLGCLVHPRENGQATVRGDGAE HHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHEECCCEEEEECCCCCEEEECCCCE LRTDGAAAVRGARGVLVSAHGRPRAAGSQLAREELMELLEQARELARTLSDYAGSHQGVP ECCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AESSGADALLQAVRQWDGDRAEGADRERGDGLVCAAAPEGIVIATGATLISCAAEDHEVC CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCHHHH ASHQLRLTAGEGLVANAGAGIGLFAQSGDLRSIAHQGLHLTQAQQGDVVTEAARNVRVSA CCCEEEEEECCCEEEECCCCEEEEECCCCHHHHHHCCCEEECCCCCCHHHHHHHCEEEEE AEGEVLISAPVIRLVAQDGSFLRLGGGIALGTEGAVQVKAARHSLGGPATDSIDLPVFDR CCCCEEEECCEEEEEECCCCEEEECCCEEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCC AGADQRFALLYPGAEGAEPQPAGGRRYEITLKDGRVVAGTADAEGRTDMLTSEAMQVAHI CCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHEEEE RVFDR EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA