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The map label for this gene is 119897594

Identifier: 119897594

GI number: 119897594

Start: 1420836

End: 1421360

Strand: Direct

Name: 119897594

Synonym: azo1303

Alternate gene names: NA

Gene position: 1420836-1421360 (Clockwise)

Preceding gene: 119897593

Following gene: 119897595

Centisome position: 32.47

GC content: 65.71

Gene sequence:

>525_bases
ATGGTCCGAGAAAGTACCCAGAAGAAGCTGTCGCGCGTGCGTCCGCCCCGCGTGCAAATCACGTATGACGTCGAGGTCGG
AGATGCCATCGAAACCAAGGAGCTGCCTTTCGTACTGGGGGTGCTGGGCGACTACACCGGGCATGCACGGGAGCAGCTAC
CCCGGCTCAAGGAAAGGAAGTTCGTCGCCATCGACCGCGACAACTTCGACGACGTCATGAAGGCGCTCGCCCCTCGGCTG
GGGCTGCGGGTGCCCAACCGGCTGTCCGCCGAAGGCGGCCTGCTCGGCGTAGAGCTGGGGTTCGCAGCGATGGAGGATTT
CGAGCCGCAGAACGTGGTGGCGCAGTTCACCCCGCTGCGGCGCTTGCTCGAGGCGCGGCAGCGTTTGGCCGAACTGCGCA
ACAAGCTGGTGGGCAGCGAACGCTTCGAAGCCCTGCTCAACGAAGCCGTCGCTGACCGCGACGCCCTGCAGGCACTGAAG
GGAGAACTGGACGCTCGCGGGGGGATGCATGACGGCGCGCGATGA

Upstream 100 bases:

>100_bases
GATCAGCCGTTGATGCCCGCTTCCCGCCCTATCCCCAACCGCGGCCGACGCCATTGCCCGCCGCTTCAGTCCATCCCGTT
GTCACGGAGTGAGTCCGTTC

Downstream 100 bases:

>100_bases
ACACCTGGTGCGCACGAGCGCTTCTCCCCAGGTCGAGGCAGAGGGTGCCGGACTGCTGGATTCGCTGATCGCGCGCAGTC
GGGTCGCGGTGGATGAGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss S; Protein ImpB; Conserved Protein; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MVRESTQKKLSRVRPPRVQITYDVEVGDAIETKELPFVLGVLGDYTGHAREQLPRLKERKFVAIDRDNFDDVMKALAPRL
GLRVPNRLSAEGGLLGVELGFAAMEDFEPQNVVAQFTPLRRLLEARQRLAELRNKLVGSERFEALLNEAVADRDALQALK
GELDARGGMHDGAR

Sequences:

>Translated_174_residues
MVRESTQKKLSRVRPPRVQITYDVEVGDAIETKELPFVLGVLGDYTGHAREQLPRLKERKFVAIDRDNFDDVMKALAPRL
GLRVPNRLSAEGGLLGVELGFAAMEDFEPQNVVAQFTPLRRLLEARQRLAELRNKLVGSERFEALLNEAVADRDALQALK
GELDARGGMHDGAR
>Mature_174_residues
MVRESTQKKLSRVRPPRVQITYDVEVGDAIETKELPFVLGVLGDYTGHAREQLPRLKERKFVAIDRDNFDDVMKALAPRL
GLRVPNRLSAEGGLLGVELGFAAMEDFEPQNVVAQFTPLRRLLEARQRLAELRNKLVGSERFEALLNEAVADRDALQALK
GELDARGGMHDGAR

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19489; Mature: 19489

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRESTQKKLSRVRPPRVQITYDVEVGDAIETKELPFVLGVLGDYTGHAREQLPRLKERK
CCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHCCHHHHHHHHCCCCHHHHHHHHHHHCC
FVAIDRDNFDDVMKALAPRLGLRVPNRLSAEGGLLGVELGFAAMEDFEPQNVVAQFTPLR
EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHH
RLLEARQRLAELRNKLVGSERFEALLNEAVADRDALQALKGELDARGGMHDGAR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVRESTQKKLSRVRPPRVQITYDVEVGDAIETKELPFVLGVLGDYTGHAREQLPRLKERK
CCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHCCHHHHHHHHCCCCHHHHHHHHHHHCC
FVAIDRDNFDDVMKALAPRLGLRVPNRLSAEGGLLGVELGFAAMEDFEPQNVVAQFTPLR
EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHH
RLLEARQRLAELRNKLVGSERFEALLNEAVADRDALQALKGELDARGGMHDGAR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA