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The map label for this gene is yeiE [H]

Identifier: 119897572

GI number: 119897572

Start: 1380741

End: 1381667

Strand: Direct

Name: yeiE [H]

Synonym: azo1281

Alternate gene names: 119897572

Gene position: 1380741-1381667 (Clockwise)

Preceding gene: 119897567

Following gene: 119897574

Centisome position: 31.55

GC content: 68.28

Gene sequence:

>927_bases
ATGCGATTCACTTTGCGCCAGCTCGAAATCTTCGTGTCCGTGGCTCGCGGCGAGAACGTTTCGCGCGCCGCCGAGATGAT
GAACCTGTCTCAGTCCGCCACCAGCGCGGCGCTCGCCGAGCTGGAGCACCAGTTCGAGCAGCAGTTGTTCGACCGCAGCG
GCCGGCGGCTGCGGCTCAATGAACGCGGCCGGCTGCTGTTGCCGCGCGCGGTGGAATTCCTCGATCGCGCGCAGGAGATC
GAGGCGCTGCTGCGCGGCGAGCGCGGGTTGGGCGATTTGCGCATCGGCGCCACGCTGACGATCGGCAACTACCTGCTGCC
GCTGATTGCGGCGGGGTTCCTGCAGCGCCACCCGGAGAGCCGCGTCCATCTTCTGGTGGAGAACACCGAGAGCGTGGTGG
CCAAGGTGGCGCGCTACGAGATCGACTTCGGGTTGGTCGAGGGGCGGGTGGACGACCCGGACGTGGAGGTGGCCGAATGG
GTGGGCGACGAGTTGTCGGTCTTTTGCGCGCCGACCCATCCGCTGGCGCAGCGCGGAAAGGCGCGCTGGGAGGAACTCGC
CGGGGAGCCGTGGATCCTGCGCGAACGCGGATCGGGCACGCGCCAGACGCTGGAGCAGGCGTTACGCCACCAGACCAAGG
CGATCGTCCCTCGGCTGGAACTCGAACATACCGAAGCGGTGAAGCGCGCGGTGGAGAGCGGGCTGGGCATCGGCTGCATC
TCGCGGCTGGCGCTGCGCGACGCCTTCCGGCGCGGCAGCCTCGTGCGGATCGAAACGCCGGACCTCGACCTGCGGCGCAA
ATTCCTCTTCGTGTGGCATCGCGGCAAGTACCACACCGCGGCGATCCGCACCTTTCTGGACGATTGCCGGGCGCTCACTG
GCGGGGCTGGCTTCAGTCACGAGATTCCGTTGCCGGCCGTGCCCTGA

Upstream 100 bases:

>100_bases
TGCCGGCTCCGGGGGCGGAAAAGGGATTGAGCGCGATTCTAATGAGTGTCTTTTAGCGATTAAGCGGATAATTCAGATAA
GAGTTATCTGGATAATCGAT

Downstream 100 bases:

>100_bases
AGCGATTGCCGCGGTTTCGTGCCGACCAGGCCGACGCGTCGCGGTGGGGCGTTTTCGCCGCGACGCCGCCTGTTCCAGTG
CGTGTGGCGGGCGCAGCCAG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MRFTLRQLEIFVSVARGENVSRAAEMMNLSQSATSAALAELEHQFEQQLFDRSGRRLRLNERGRLLLPRAVEFLDRAQEI
EALLRGERGLGDLRIGATLTIGNYLLPLIAAGFLQRHPESRVHLLVENTESVVAKVARYEIDFGLVEGRVDDPDVEVAEW
VGDELSVFCAPTHPLAQRGKARWEELAGEPWILRERGSGTRQTLEQALRHQTKAIVPRLELEHTEAVKRAVESGLGIGCI
SRLALRDAFRRGSLVRIETPDLDLRRKFLFVWHRGKYHTAAIRTFLDDCRALTGGAGFSHEIPLPAVP

Sequences:

>Translated_308_residues
MRFTLRQLEIFVSVARGENVSRAAEMMNLSQSATSAALAELEHQFEQQLFDRSGRRLRLNERGRLLLPRAVEFLDRAQEI
EALLRGERGLGDLRIGATLTIGNYLLPLIAAGFLQRHPESRVHLLVENTESVVAKVARYEIDFGLVEGRVDDPDVEVAEW
VGDELSVFCAPTHPLAQRGKARWEELAGEPWILRERGSGTRQTLEQALRHQTKAIVPRLELEHTEAVKRAVESGLGIGCI
SRLALRDAFRRGSLVRIETPDLDLRRKFLFVWHRGKYHTAAIRTFLDDCRALTGGAGFSHEIPLPAVP
>Mature_308_residues
MRFTLRQLEIFVSVARGENVSRAAEMMNLSQSATSAALAELEHQFEQQLFDRSGRRLRLNERGRLLLPRAVEFLDRAQEI
EALLRGERGLGDLRIGATLTIGNYLLPLIAAGFLQRHPESRVHLLVENTESVVAKVARYEIDFGLVEGRVDDPDVEVAEW
VGDELSVFCAPTHPLAQRGKARWEELAGEPWILRERGSGTRQTLEQALRHQTKAIVPRLELEHTEAVKRAVESGLGIGCI
SRLALRDAFRRGSLVRIETPDLDLRRKFLFVWHRGKYHTAAIRTFLDDCRALTGGAGFSHEIPLPAVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=289, Percent_Identity=44.2906574394464, Blast_Score=233, Evalue=9e-63,
Organism=Escherichia coli, GI145693105, Length=250, Percent_Identity=28, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1788748, Length=296, Percent_Identity=27.027027027027, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI1787530, Length=269, Percent_Identity=28.6245353159851, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI157672245, Length=309, Percent_Identity=27.5080906148867, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788296, Length=294, Percent_Identity=26.8707482993197, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI87082132, Length=284, Percent_Identity=26.056338028169, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI87081904, Length=268, Percent_Identity=28.3582089552239, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787601, Length=175, Percent_Identity=27.4285714285714, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786401, Length=292, Percent_Identity=26.7123287671233, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788887, Length=290, Percent_Identity=26.551724137931, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789204, Length=260, Percent_Identity=29.2307692307692, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790399, Length=281, Percent_Identity=25.2669039145907, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787879, Length=300, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787128, Length=291, Percent_Identity=24.3986254295533, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34679; Mature: 34679

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTLRQLEIFVSVARGENVSRAAEMMNLSQSATSAALAELEHQFEQQLFDRSGRRLRLN
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
ERGRLLLPRAVEFLDRAQEIEALLRGERGLGDLRIGATLTIGNYLLPLIAAGFLQRHPES
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCEEECEEEEHHHHHHHHHHHHHHHHCCCC
RVHLLVENTESVVAKVARYEIDFGLVEGRVDDPDVEVAEWVGDELSVFCAPTHPLAQRGK
CEEEEEECHHHHHHHHHHHHHCHHEEECCCCCCCHHHHHHCCCCCEEEECCCCHHHHHHH
ARWEELAGEPWILRERGSGTRQTLEQALRHQTKAIVPRLELEHTEAVKRAVESGLGIGCI
HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
SRLALRDAFRRGSLVRIETPDLDLRRKFLFVWHRGKYHTAAIRTFLDDCRALTGGAGFSH
HHHHHHHHHHCCCEEEEECCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC
EIPLPAVP
CCCCCCCC
>Mature Secondary Structure
MRFTLRQLEIFVSVARGENVSRAAEMMNLSQSATSAALAELEHQFEQQLFDRSGRRLRLN
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
ERGRLLLPRAVEFLDRAQEIEALLRGERGLGDLRIGATLTIGNYLLPLIAAGFLQRHPES
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCEEECEEEEHHHHHHHHHHHHHHHHCCCC
RVHLLVENTESVVAKVARYEIDFGLVEGRVDDPDVEVAEWVGDELSVFCAPTHPLAQRGK
CEEEEEECHHHHHHHHHHHHHCHHEEECCCCCCCHHHHHHCCCCCEEEECCCCHHHHHHH
ARWEELAGEPWILRERGSGTRQTLEQALRHQTKAIVPRLELEHTEAVKRAVESGLGIGCI
HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
SRLALRDAFRRGSLVRIETPDLDLRRKFLFVWHRGKYHTAAIRTFLDDCRALTGGAGFSH
HHHHHHHHHHCCCEEEEECCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC
EIPLPAVP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]