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The map label for this gene is nirD [H]

Identifier: 119897467

GI number: 119897467

Start: 1269149

End: 1269487

Strand: Direct

Name: nirD [H]

Synonym: azo1176

Alternate gene names: 119897467

Gene position: 1269149-1269487 (Clockwise)

Preceding gene: 119897466

Following gene: 119897468

Centisome position: 29.0

GC content: 67.85

Gene sequence:

>339_bases
ATGACTACCGAAACCCTCAACTGGACCGCCGTCTGCAAGGTCGGCGACATCCTCCCCGGCACCGGCGTGTGCGCGCTGGT
CGATGAGCGGCACGTGGCGGTGTTCCGCCTCGGCAAGGACAACTTCTACGCCATCGACAACATCGACCCGCGCTCCGGCG
TCAGCGTGCTGTCGCGCGGGCTGATCGGCAACCTCGGCGAGCACATCGTGGTGGCCTCGCCGATCTACAAGAACCACTTC
GACCTGCGCACCGGGGCATGCCTGGAAGCGCCGGAGCACTCGGTGCGCGCGCACCGCGTGCAGATCAGCGGCGACGACGT
GCTCGTCGCGCTCGGCTGA

Upstream 100 bases:

>100_bases
CGTCAAGGAGCGCGGCCAGATCCGTCCGGCCCGCGCCGAAGAACGCGACGCCGCCACCGCCGATCCGCTCGCCGTCTGAG
CCTGAACAGGAATAGCCAAC

Downstream 100 bases:

>100_bases
CCTCGTTCAACGCATTCAGGAAAACGACAACATGGCCTACCTGGCTCCTGCCGAATTCGTCACCAAGATGATCGATGCCG
GCGAATCCAAACTGCTGATG

Product: nitrite reductase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MTTETLNWTAVCKVGDILPGTGVCALVDERHVAVFRLGKDNFYAIDNIDPRSGVSVLSRGLIGNLGEHIVVASPIYKNHF
DLRTGACLEAPEHSVRAHRVQISGDDVLVALG

Sequences:

>Translated_112_residues
MTTETLNWTAVCKVGDILPGTGVCALVDERHVAVFRLGKDNFYAIDNIDPRSGVSVLSRGLIGNLGEHIVVASPIYKNHF
DLRTGACLEAPEHSVRAHRVQISGDDVLVALG
>Mature_111_residues
TTETLNWTAVCKVGDILPGTGVCALVDERHVAVFRLGKDNFYAIDNIDPRSGVSVLSRGLIGNLGEHIVVASPIYKNHFD
LRTGACLEAPEHSVRAHRVQISGDDVLVALG

Specific function: Required for activity of the reductase [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis nasE [H]

Homologues:

Organism=Escherichia coli, GI1789766, Length=98, Percent_Identity=44.8979591836735, Blast_Score=89, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012748
- InterPro:   IPR017881
- InterPro:   IPR017941 [H]

Pfam domain/function: NA

EC number: =1.7.1.4 [H]

Molecular weight: Translated: 12051; Mature: 11920

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTETLNWTAVCKVGDILPGTGVCALVDERHVAVFRLGKDNFYAIDNIDPRSGVSVLSRG
CCCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCEEEECCCCCCCCHHHHHHC
LIGNLGEHIVVASPIYKNHFDLRTGACLEAPEHSVRAHRVQISGDDVLVALG
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEC
>Mature Secondary Structure 
TTETLNWTAVCKVGDILPGTGVCALVDERHVAVFRLGKDNFYAIDNIDPRSGVSVLSRG
CCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCEEEECCCCCCCCHHHHHHC
LIGNLGEHIVVASPIYKNHFDLRTGACLEAPEHSVRAHRVQISGDDVLVALG
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]