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The map label for this gene is crtI [H]

Identifier: 119897410

GI number: 119897410

Start: 1207554

End: 1209134

Strand: Direct

Name: crtI [H]

Synonym: azo1119

Alternate gene names: 119897410

Gene position: 1207554-1209134 (Clockwise)

Preceding gene: 119897409

Following gene: 119897416

Centisome position: 27.59

GC content: 69.89

Gene sequence:

>1581_bases
ATGAGCGGCTACGACGCAATCATCGTCGGCAGCGGCATCAACTCGCTGGTGTGCGCCGGCGTCATGTCCAGGCGCGGCAA
GAAGGTGCTGGTGCTGGAACGCGAGGCGGTGCTCGGCGGCTGCATCCGCAGCGAGCAGCTCACCGCGCCCGGCTACCTGC
ACGACACGATGTCCACCGCCCATCCGCTGTTCGTCACCTCGCCCGGCTACGCCGAACTGAAGGACGCGCTGCACGCCAAC
GGCCTGGATTACGGCAACAACGCCACTCCCACCGGCGTGCTGCTGCCCGACGGCCGCTCGCTGATCCTTGGCCGCGACCG
TGCCGCCAACATCGCGATGATGAACGCGCTCGCCCCCGGCGACGGCGATGCCTACGGCGCCGGCATGGCCTTCGTCGAGC
AGAACGCGCAGCTGATCTTCGCGCTGCTCGGCAACGAGCTGTGGAGCGCCGGCGTCGCCAAGACCATGCTCGGCCGCTTG
TGGAAGCAGGGCACGCACGACACCGTCGGCTTCTTCGGCCCCGCGATGCAAAGCTGCCGCGCCTGGATGGAGACTCAGCT
CAAGTCCGACCTGGTGCGCGCGATGCTGGCGCCCTGGGTGCTGCACACCGGCCTCGGGCCGGAAAGCGCGATGTCGGCGC
TGATGGCGCAGGTGATCGCGTTCACGCTGGAGGCCGTCGGCCTGCCGCTGGTGAAGGGCGGCAACGCACGCACCGTGGAT
GCCTTCCGTGCGGTGGTCGAAGGCGCCGGGGGCCGCTTCGAAACCGGTGCCGACGTTGCCGAGATCCTGGTCGAAGGCGG
CAAGGCGCGCGGCGTGCGCACCGGCGACGGCCGCGTGTTCGAGGCGAAGCAGGTCATCTGCAACGTCACCCCCACCCAGC
TCTACGGCCGCCTGTTGCCCGCCGCCCACAGTCCGGAACCGCTGCGCAGCCAGGCCGCGCAGTACCGCTACGGCAAGGGC
AACATGCAGATCCACCTGGCGCTGTCCGAACCGCCGCAATGGGCCGACCCCAAGCTGCGTGAGGTGATCTACCTGCACCT
CACCAGCGGCCTGGACGGCGTGTCGCGCGCGGTGAACGAGGCCGAGCGCGGCCTGCTGCCGGCCGAAGGCACCATCTGCG
TGGCCCAGCCCTGCGCGGTCGATCCCTCACGCGCGCCGGCCGGCGGTTGGGTGATGTGGGTGCAGCTGCCGGAATGCCCG
CGCACCGTGCGCGGCGACGCGGCCGGCGAAATCGCCGCGCCGGCCGACGGCAGCTGGACGGAGGACGTGCGCGAGCGCTA
CGCCGACCGCGCGATCGAACGGATTGCCGCGCATGTGCCGAATCTGAAAGCCAGCATCATCGGCCGCAAGGTGATCTCGC
CGGCAGACCTGGAGCGGCTCAACATCAACCTGGTGGGTGGTGACCCGTACTCGGGCGAGTGCGCGATCGACCAGTATTTG
TTCTGGCGGCCGCTGCGCGGGGTGAAGAACCACGCGACCCCGGTGAAGGGGCTGTACCACATCGGCGCCTCCACGCACCC
GGGCCCGGGGTTGTCGGGGGCGTCGGGGTTTCACGTGGCGAATGCATTGGTGAAGGGGTAG

Upstream 100 bases:

>100_bases
CGCTGGGGCCATCCCTTACTGCTCCGGAGCCCGTCGCCATGACCGCGCACGCCATGCCCTGCCTAGCCTCCAACCCGCTG
CGCCAGCCGGGAGTCACGCG

Downstream 100 bases:

>100_bases
GTTTGATTTGCTCCCTCCCCTTCAAGGGGAGGGCTGGGGTGGGGATGGGGTATCGCCCGCGCGAATCCAACCCCATCCCC
CTCCTAAGTAGTCTCGGCTT

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSGYDAIIVGSGINSLVCAGVMSRRGKKVLVLEREAVLGGCIRSEQLTAPGYLHDTMSTAHPLFVTSPGYAELKDALHAN
GLDYGNNATPTGVLLPDGRSLILGRDRAANIAMMNALAPGDGDAYGAGMAFVEQNAQLIFALLGNELWSAGVAKTMLGRL
WKQGTHDTVGFFGPAMQSCRAWMETQLKSDLVRAMLAPWVLHTGLGPESAMSALMAQVIAFTLEAVGLPLVKGGNARTVD
AFRAVVEGAGGRFETGADVAEILVEGGKARGVRTGDGRVFEAKQVICNVTPTQLYGRLLPAAHSPEPLRSQAAQYRYGKG
NMQIHLALSEPPQWADPKLREVIYLHLTSGLDGVSRAVNEAERGLLPAEGTICVAQPCAVDPSRAPAGGWVMWVQLPECP
RTVRGDAAGEIAAPADGSWTEDVRERYADRAIERIAAHVPNLKASIIGRKVISPADLERLNINLVGGDPYSGECAIDQYL
FWRPLRGVKNHATPVKGLYHIGASTHPGPGLSGASGFHVANALVKG

Sequences:

>Translated_526_residues
MSGYDAIIVGSGINSLVCAGVMSRRGKKVLVLEREAVLGGCIRSEQLTAPGYLHDTMSTAHPLFVTSPGYAELKDALHAN
GLDYGNNATPTGVLLPDGRSLILGRDRAANIAMMNALAPGDGDAYGAGMAFVEQNAQLIFALLGNELWSAGVAKTMLGRL
WKQGTHDTVGFFGPAMQSCRAWMETQLKSDLVRAMLAPWVLHTGLGPESAMSALMAQVIAFTLEAVGLPLVKGGNARTVD
AFRAVVEGAGGRFETGADVAEILVEGGKARGVRTGDGRVFEAKQVICNVTPTQLYGRLLPAAHSPEPLRSQAAQYRYGKG
NMQIHLALSEPPQWADPKLREVIYLHLTSGLDGVSRAVNEAERGLLPAEGTICVAQPCAVDPSRAPAGGWVMWVQLPECP
RTVRGDAAGEIAAPADGSWTEDVRERYADRAIERIAAHVPNLKASIIGRKVISPADLERLNINLVGGDPYSGECAIDQYL
FWRPLRGVKNHATPVKGLYHIGASTHPGPGLSGASGFHVANALVKG
>Mature_525_residues
SGYDAIIVGSGINSLVCAGVMSRRGKKVLVLEREAVLGGCIRSEQLTAPGYLHDTMSTAHPLFVTSPGYAELKDALHANG
LDYGNNATPTGVLLPDGRSLILGRDRAANIAMMNALAPGDGDAYGAGMAFVEQNAQLIFALLGNELWSAGVAKTMLGRLW
KQGTHDTVGFFGPAMQSCRAWMETQLKSDLVRAMLAPWVLHTGLGPESAMSALMAQVIAFTLEAVGLPLVKGGNARTVDA
FRAVVEGAGGRFETGADVAEILVEGGKARGVRTGDGRVFEAKQVICNVTPTQLYGRLLPAAHSPEPLRSQAAQYRYGKGN
MQIHLALSEPPQWADPKLREVIYLHLTSGLDGVSRAVNEAERGLLPAEGTICVAQPCAVDPSRAPAGGWVMWVQLPECPR
TVRGDAAGEIAAPADGSWTEDVRERYADRAIERIAAHVPNLKASIIGRKVISPADLERLNINLVGGDPYSGECAIDQYLF
WRPLRGVKNHATPVKGLYHIGASTHPGPGLSGASGFHVANALVKG

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=566, Percent_Identity=26.678445229682, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17540238, Length=538, Percent_Identity=27.3234200743494, Blast_Score=164, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55729; Mature: 55598

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYDAIIVGSGINSLVCAGVMSRRGKKVLVLEREAVLGGCIRSEQLTAPGYLHDTMSTA
CCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHCC
HPLFVTSPGYAELKDALHANGLDYGNNATPTGVLLPDGRSLILGRDRAANIAMMNALAPG
CCEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEEEECCC
DGDAYGAGMAFVEQNAQLIFALLGNELWSAGVAKTMLGRLWKQGTHDTVGFFGPAMQSCR
CCCCCCCCHHEECCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AWMETQLKSDLVRAMLAPWVLHTGLGPESAMSALMAQVIAFTLEAVGLPLVKGGNARTVD
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHH
AFRAVVEGAGGRFETGADVAEILVEGGKARGVRTGDGRVFEAKQVICNVTPTQLYGRLLP
HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCEEEHHHHHCCCCHHHHHHHHCC
AAHSPEPLRSQAAQYRYGKGNMQIHLALSEPPQWADPKLREVIYLHLTSGLDGVSRAVNE
CCCCCCHHHHHHHHHEECCCCEEEEEEECCCCCCCCCHHHHEEEEEECCCCCHHHHHHHH
AERGLLPAEGTICVAQPCAVDPSRAPAGGWVMWVQLPECPRTVRGDAAGEIAAPADGSWT
HHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
EDVRERYADRAIERIAAHVPNLKASIIGRKVISPADLERLNINLVGGDPYSGECAIDQYL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHH
FWRPLRGVKNHATPVKGLYHIGASTHPGPGLSGASGFHVANALVKG
HHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SGYDAIIVGSGINSLVCAGVMSRRGKKVLVLEREAVLGGCIRSEQLTAPGYLHDTMSTA
CCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHCC
HPLFVTSPGYAELKDALHANGLDYGNNATPTGVLLPDGRSLILGRDRAANIAMMNALAPG
CCEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEEEECCC
DGDAYGAGMAFVEQNAQLIFALLGNELWSAGVAKTMLGRLWKQGTHDTVGFFGPAMQSCR
CCCCCCCCHHEECCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AWMETQLKSDLVRAMLAPWVLHTGLGPESAMSALMAQVIAFTLEAVGLPLVKGGNARTVD
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHH
AFRAVVEGAGGRFETGADVAEILVEGGKARGVRTGDGRVFEAKQVICNVTPTQLYGRLLP
HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCEEEHHHHHCCCCHHHHHHHHCC
AAHSPEPLRSQAAQYRYGKGNMQIHLALSEPPQWADPKLREVIYLHLTSGLDGVSRAVNE
CCCCCCHHHHHHHHHEECCCCEEEEEEECCCCCCCCCHHHHEEEEEECCCCCHHHHHHHH
AERGLLPAEGTICVAQPCAVDPSRAPAGGWVMWVQLPECPRTVRGDAAGEIAAPADGSWT
HHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
EDVRERYADRAIERIAAHVPNLKASIIGRKVISPADLERLNINLVGGDPYSGECAIDQYL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHH
FWRPLRGVKNHATPVKGLYHIGASTHPGPGLSGASGFHVANALVKG
HHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]