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The map label for this gene is yciM [H]

Identifier: 119897366

GI number: 119897366

Start: 1157814

End: 1158989

Strand: Direct

Name: yciM [H]

Synonym: azo1075

Alternate gene names: 119897366

Gene position: 1157814-1158989 (Clockwise)

Preceding gene: 119897365

Following gene: 119897367

Centisome position: 26.46

GC content: 63.95

Gene sequence:

>1176_bases
ATGGAAATCGAGTTCTGGTGGCTGCTTGCGCTGCCGCTCTTCTTTGCGCTCGGATGGCTTGCCGCGCGGATCGACATCCG
TCAGGTCGTGCAGGAGTCCCGTGCCTTGCCGCGCTCCTATCTGGCCGGGCTCAATTTCCTGCTGAACGAGCAGCCTGACA
AGGCGATCGACGCGTTCATCGAGGCGGTGCGGATCGACCCGCAGACGGTCGAACTGCACTTCGCGCTCGGGAGCCTTTTT
CGCCGCCGCGGAGAAACCGATCGCGCCATTCGCCTCCACCAGTTGCTGGTCGACCGGGATGACCTGAACGAGGACCAGCG
CCTGCAGGCGCTGGGGGAGCTGGGGCAGGACTTTCTCAAGGCCGGCTTGCTCGATCGTGCCGAGACCGTGTTCCTCAAGT
TGCGAGACACGCGCGCCAACGATGTGGCCTTGCGCTACCTGCTCGAGATCTACCAGCAGGAAAAGGACTGGGCGAAGGCG
ATCGAGATCGCGCGCGCACTGCCGGACCACGAAGAGGCGATGTGGCGCAAGGAAGTGGCGAGCTTTCATTGCGAACTCGC
CACCACCGCGCTCGCGGATTCGCGCTTTCCGGATGTGCGCCGCCACATTGACGAGGCCTTGGCGATCAACCGCAGTTGCG
TCCGCGCCAGTCTGATCGAAGGTGATCTGTACGCCGCGCAGGGACGCGACGAAGATGCGCTGGAGGCATGGAAGCGGATC
GAAAGCCAGGACCCGGTCTACCTTTCGCTTGCCGCGGAGCGGGTGATGGATGCCTATGGACGCCTTGGTCGCGTCGAGCA
GGGGCATATGTTGCTGCGCTCGTGGCTGGACCGCCATGCCTCTCTTGACCTGCTGGACGAGTTGTTCCAGTGGGAAATCG
AGAAGCTCGGGCCAAAGGCGGCCTACGACCTGGTGCGAGAAGAATTACGCCGCAACCCGACCCTGCTCGGGCTGGACAAG
CTGCTGGAGGCGGCGTTGCTCGCCGCGCCCGCGGAGCAGCGCGGCGACATAGAACTGGTGAAACAGTTGATTCACGGACA
CACGCGAAAGGTTGCGCGATACCGCTGCGAGTCCTGCGGGTTCAAGGCGCGGCAGTTCCATTGGCATTGTCCAGCGTGCG
GTGGCTGGGAAACCTACCCGCCGCGGCGCACCGAGGAGTTCGACCTGGAGCCGTGA

Upstream 100 bases:

>100_bases
TCGCGGCTCCGCCGGCAACTCGTACGCGCGGAGCGCAGCCAGGGCAGCGCGTCGCCGCCGGCGACTGACGCACAGGCACC
GGAAACCCTTTAAGAACAAT

Downstream 100 bases:

>100_bases
CCCACGCTTCGCTCGCGGGGCAGGGGCACGGGTGAGTCTGTCATCGTCTCGCTTCAATATCGCAGGGCGGGCGCGGACGG
ACCGGGCCGGCGGAATCCAA

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MEIEFWWLLALPLFFALGWLAARIDIRQVVQESRALPRSYLAGLNFLLNEQPDKAIDAFIEAVRIDPQTVELHFALGSLF
RRRGETDRAIRLHQLLVDRDDLNEDQRLQALGELGQDFLKAGLLDRAETVFLKLRDTRANDVALRYLLEIYQQEKDWAKA
IEIARALPDHEEAMWRKEVASFHCELATTALADSRFPDVRRHIDEALAINRSCVRASLIEGDLYAAQGRDEDALEAWKRI
ESQDPVYLSLAAERVMDAYGRLGRVEQGHMLLRSWLDRHASLDLLDELFQWEIEKLGPKAAYDLVREELRRNPTLLGLDK
LLEAALLAAPAEQRGDIELVKQLIHGHTRKVARYRCESCGFKARQFHWHCPACGGWETYPPRRTEEFDLEP

Sequences:

>Translated_391_residues
MEIEFWWLLALPLFFALGWLAARIDIRQVVQESRALPRSYLAGLNFLLNEQPDKAIDAFIEAVRIDPQTVELHFALGSLF
RRRGETDRAIRLHQLLVDRDDLNEDQRLQALGELGQDFLKAGLLDRAETVFLKLRDTRANDVALRYLLEIYQQEKDWAKA
IEIARALPDHEEAMWRKEVASFHCELATTALADSRFPDVRRHIDEALAINRSCVRASLIEGDLYAAQGRDEDALEAWKRI
ESQDPVYLSLAAERVMDAYGRLGRVEQGHMLLRSWLDRHASLDLLDELFQWEIEKLGPKAAYDLVREELRRNPTLLGLDK
LLEAALLAAPAEQRGDIELVKQLIHGHTRKVARYRCESCGFKARQFHWHCPACGGWETYPPRRTEEFDLEP
>Mature_391_residues
MEIEFWWLLALPLFFALGWLAARIDIRQVVQESRALPRSYLAGLNFLLNEQPDKAIDAFIEAVRIDPQTVELHFALGSLF
RRRGETDRAIRLHQLLVDRDDLNEDQRLQALGELGQDFLKAGLLDRAETVFLKLRDTRANDVALRYLLEIYQQEKDWAKA
IEIARALPDHEEAMWRKEVASFHCELATTALADSRFPDVRRHIDEALAINRSCVRASLIEGDLYAAQGRDEDALEAWKRI
ESQDPVYLSLAAERVMDAYGRLGRVEQGHMLLRSWLDRHASLDLLDELFQWEIEKLGPKAAYDLVREELRRNPTLLGLDK
LLEAALLAAPAEQRGDIELVKQLIHGHTRKVARYRCESCGFKARQFHWHCPACGGWETYPPRRTEEFDLEP

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=377, Percent_Identity=36.0742705570292, Blast_Score=231, Evalue=9e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45171; Mature: 45171

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIEFWWLLALPLFFALGWLAARIDIRQVVQESRALPRSYLAGLNFLLNEQPDKAIDAFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
EAVRIDPQTVELHFALGSLFRRRGETDRAIRLHQLLVDRDDLNEDQRLQALGELGQDFLK
HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AGLLDRAETVFLKLRDTRANDVALRYLLEIYQQEKDWAKAIEIARALPDHEEAMWRKEVA
HHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SFHCELATTALADSRFPDVRRHIDEALAINRSCVRASLIEGDLYAAQGRDEDALEAWKRI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHH
ESQDPVYLSLAAERVMDAYGRLGRVEQGHMLLRSWLDRHASLDLLDELFQWEIEKLGPKA
CCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHH
AYDLVREELRRNPTLLGLDKLLEAALLAAPAEQRGDIELVKQLIHGHTRKVARYRCESCG
HHHHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
FKARQFHWHCPACGGWETYPPRRTEEFDLEP
CCHHHCEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEIEFWWLLALPLFFALGWLAARIDIRQVVQESRALPRSYLAGLNFLLNEQPDKAIDAFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
EAVRIDPQTVELHFALGSLFRRRGETDRAIRLHQLLVDRDDLNEDQRLQALGELGQDFLK
HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AGLLDRAETVFLKLRDTRANDVALRYLLEIYQQEKDWAKAIEIARALPDHEEAMWRKEVA
HHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SFHCELATTALADSRFPDVRRHIDEALAINRSCVRASLIEGDLYAAQGRDEDALEAWKRI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHH
ESQDPVYLSLAAERVMDAYGRLGRVEQGHMLLRSWLDRHASLDLLDELFQWEIEKLGPKA
CCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHH
AYDLVREELRRNPTLLGLDKLLEAALLAAPAEQRGDIELVKQLIHGHTRKVARYRCESCG
HHHHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
FKARQFHWHCPACGGWETYPPRRTEEFDLEP
CCHHHCEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]