| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is livJ [C]
Identifier: 119897352
GI number: 119897352
Start: 1140857
End: 1142011
Strand: Reverse
Name: livJ [C]
Synonym: azo1061
Alternate gene names: 119897352
Gene position: 1142011-1140857 (Counterclockwise)
Preceding gene: 119897353
Following gene: 119897350
Centisome position: 26.1
GC content: 68.4
Gene sequence:
>1155_bases ATGACATCCCTGCGTCTGCCCGCGCTCTTTCGCCGCGGACTCGCGTCCCTGCTCGCCGTTGCGGCGACATGCGGTGCGCC TGCCGCCTTCGCCCAGCAGGGCGTAGACGCCGACGCCATCACGCTGGGTCACACGGGCGCCCTCAGCGGCCCGCTCGCCG AACTCAACAAGGAATACCTGGCCGGCGCGAACCTGTATTTCAACCAGACCAACGAGCGCGGCGGCATCAACGGACGGCGG ATCCGGCTGCTCACGCTCGACGATGCCTACGATCCCAACAAGGCGGCCGAGAACGCGCAGCGGCTGATCGAACAGCATCA GGTTTTCGCGCTCTTCGCCTGCTTCGGCACCGGCCCCAGCCTCAAGGTCGTGCCGCTGGCCGCGGCCGCCAAGGTCCCGT TCTTCGCCCCCTACACCGGCGCGGAAGCGCTGCGCGAGCCGCTCAACCCCTACGTATTCCACGTCCGCGCGTCGTACCGG CAGGAGGTCGAGAAGGCGGTGGACCACCTCACGAAGCTGGGGGTGAAGTCGATCGGGGTTGTCCACCACGCCGACCCCTT CGGCCAGGCCGGCCTCGACGCAGCGGTCGCATCGCTCGCCAAGCGCAATCTGACGCCGGCAGTGGTCGCGCCGATCGCTT CCAGCGGTGCGGACGCGGCGGACACGGTGAAGAAGGTCGCCGCGGCAAACCCGGCCGCGGTCATCATGATCACCGCCGGC AACAGTTCCGCCGCCCTGCTGCGCGCACTGCAGCAGTCAGGCAGCCAGCCGATGCTCTACGGGCTGTCGGTGATCAGCAG CACCCAGCTCATCCGCGAACTCGGCGAGAAGGCCCACGGCCTGGTGATCGCGCAGGTGATGCCCTCGCCTTTCCGGGTCG ACTATCCCTTCGTGCGCGATTACCGCCAGGCGGCCGAGAAAGCGGGCATCGCCTACTCGTACGCGTCGCTGGAGGGCTAT CTCGCGGCGCGCAGTTTCGGCGAAGCCGTGCGCCGCGCCGGACGCGATCTCACCCGCGAAAAGCTGATCAGCGCCCTGGA GAACATGGGCGACTGGGACGCCGGCGGCATGCGCATGGCGTTCTCGCCGCGGCGCCATGTGGGCATGGATTATGTGGACC TGACGGTGATCAGCCGCGGCAACTTCACCCGCTGA
Upstream 100 bases:
>100_bases TGAGGAGCGCAGCCGCTGCCGGCGGCACCGCCAGCGCGGCTGGCAGCAACAACAACGATCGCCGCTCCTCGCCACACGCT AAACCGGAGAGGAGAAAACG
Downstream 100 bases:
>100_bases CGGCGCACCGCGACTACACCACGCACCATGACAACGGCCCCGTCCAGCGGGGCCGTTGTCGTTTTCAGGCGCGGCGCCAG GTGGTGCCTCCCGCGCCGTC
Product: extracellular ligand binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTSLRLPALFRRGLASLLAVAATCGAPAAFAQQGVDADAITLGHTGALSGPLAELNKEYLAGANLYFNQTNERGGINGRR IRLLTLDDAYDPNKAAENAQRLIEQHQVFALFACFGTGPSLKVVPLAAAAKVPFFAPYTGAEALREPLNPYVFHVRASYR QEVEKAVDHLTKLGVKSIGVVHHADPFGQAGLDAAVASLAKRNLTPAVVAPIASSGADAADTVKKVAAANPAAVIMITAG NSSAALLRALQQSGSQPMLYGLSVISSTQLIRELGEKAHGLVIAQVMPSPFRVDYPFVRDYRQAAEKAGIAYSYASLEGY LAARSFGEAVRRAGRDLTREKLISALENMGDWDAGGMRMAFSPRRHVGMDYVDLTVISRGNFTR
Sequences:
>Translated_384_residues MTSLRLPALFRRGLASLLAVAATCGAPAAFAQQGVDADAITLGHTGALSGPLAELNKEYLAGANLYFNQTNERGGINGRR IRLLTLDDAYDPNKAAENAQRLIEQHQVFALFACFGTGPSLKVVPLAAAAKVPFFAPYTGAEALREPLNPYVFHVRASYR QEVEKAVDHLTKLGVKSIGVVHHADPFGQAGLDAAVASLAKRNLTPAVVAPIASSGADAADTVKKVAAANPAAVIMITAG NSSAALLRALQQSGSQPMLYGLSVISSTQLIRELGEKAHGLVIAQVMPSPFRVDYPFVRDYRQAAEKAGIAYSYASLEGY LAARSFGEAVRRAGRDLTREKLISALENMGDWDAGGMRMAFSPRRHVGMDYVDLTVISRGNFTR >Mature_383_residues TSLRLPALFRRGLASLLAVAATCGAPAAFAQQGVDADAITLGHTGALSGPLAELNKEYLAGANLYFNQTNERGGINGRRI RLLTLDDAYDPNKAAENAQRLIEQHQVFALFACFGTGPSLKVVPLAAAAKVPFFAPYTGAEALREPLNPYVFHVRASYRQ EVEKAVDHLTKLGVKSIGVVHHADPFGQAGLDAAVASLAKRNLTPAVVAPIASSGADAADTVKKVAAANPAAVIMITAGN SSAALLRALQQSGSQPMLYGLSVISSTQLIRELGEKAHGLVIAQVMPSPFRVDYPFVRDYRQAAEKAGIAYSYASLEGYL AARSFGEAVRRAGRDLTREKLISALENMGDWDAGGMRMAFSPRRHVGMDYVDLTVISRGNFTR
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40867; Mature: 40736
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLRLPALFRRGLASLLAVAATCGAPAAFAQQGVDADAITLGHTGALSGPLAELNKEYL CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHH AGANLYFNQTNERGGINGRRIRLLTLDDAYDPNKAAENAQRLIEQHQVFALFACFGTGPS CCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC LKVVPLAAAAKVPFFAPYTGAEALREPLNPYVFHVRASYRQEVEKAVDHLTKLGVKSIGV CEEEEEHHHCCCCCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCHHHHCE VHHADPFGQAGLDAAVASLAKRNLTPAVVAPIASSGADAADTVKKVAAANPAAVIMITAG EECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECC NSSAALLRALQQSGSQPMLYGLSVISSTQLIRELGEKAHGLVIAQVMPSPFRVDYPFVRD CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHH YRQAAEKAGIAYSYASLEGYLAARSFGEAVRRAGRDLTREKLISALENMGDWDAGGMRMA HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE FSPRRHVGMDYVDLTVISRGNFTR ECCCHHCCCCEEEEEEEECCCCCC >Mature Secondary Structure TSLRLPALFRRGLASLLAVAATCGAPAAFAQQGVDADAITLGHTGALSGPLAELNKEYL CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHH AGANLYFNQTNERGGINGRRIRLLTLDDAYDPNKAAENAQRLIEQHQVFALFACFGTGPS CCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC LKVVPLAAAAKVPFFAPYTGAEALREPLNPYVFHVRASYRQEVEKAVDHLTKLGVKSIGV CEEEEEHHHCCCCCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCHHHHCE VHHADPFGQAGLDAAVASLAKRNLTPAVVAPIASSGADAADTVKKVAAANPAAVIMITAG EECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECC NSSAALLRALQQSGSQPMLYGLSVISSTQLIRELGEKAHGLVIAQVMPSPFRVDYPFVRD CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHH YRQAAEKAGIAYSYASLEGYLAARSFGEAVRRAGRDLTREKLISALENMGDWDAGGMRMA HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE FSPRRHVGMDYVDLTVISRGNFTR ECCCHHCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]