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The map label for this gene is basR [H]

Identifier: 119897266

GI number: 119897266

Start: 1047710

End: 1048396

Strand: Direct

Name: basR [H]

Synonym: azo0975

Alternate gene names: 119897266

Gene position: 1047710-1048396 (Clockwise)

Preceding gene: 119897265

Following gene: 119897267

Centisome position: 23.94

GC content: 67.25

Gene sequence:

>687_bases
ATGCGCATTCTTCTGGCGGAAGACGACCCCGTCATTGCCGACGGCATCGTGCGGGCGCTCAAGCGCGGGGGGTACGCGGT
GGATCACGTGGGCAATGGCGCCGAAGCCGACACCGCGGTGGCGTCGCAGCCTTTCGATCTGCTGATCCTCGACCTCGGCC
TGCCGCGCCTGCCCGGCATCGAAGTGCTGAAACGGCTGCGGGCGCGCAAGTCCGCGCTGCCGGTGCTGATCCTCACTGCG
CAGGATGGCGTCGAGGACCGTGTCCGCGGGCTCGATGCGGGGGCCGACGACTACCTGACCAAGCCCTTTGCGCTGCCGGA
ACTCGAGGCGCGGGTGCGGGCACTGACGCGGCGCGGCACCGGGCAGCCGCGCTGCATCGAAGTGGGGAACCTGAGCTACG
ACCAGGCCGACCGGGTGGTAAAGATCTGCGGTCAGGTGGTGGAGTTGTCGGCGCGTGAGATCGGCCTGCTCGAGGTCTTC
ATCCTGCGTGTCGGGCGCCTGGTCAGCAAGGACCAACTCGTGGATCACCTGTGCGGCTGGGGCGAAGAGGTATCGAGCAA
CGCCATCGAGGTCTACGTTCATCGCCTGCGCAAGAAGCTGGAGGCAAGCGGGGTGCGCATCGTGACCGTGCGCGGGCTGG
GGTATTGCCTGGAAAACCCCGATGCGGCCCCGACGCAAAAAGTCTGA

Upstream 100 bases:

>100_bases
CAAACCGGACGGCGCGGCGTTCCCGAAGACCGAGTAAAAGGAGAACAGCGGAACGCACCTTAGGCGGATCCGCTTACACG
CAACTTACATCCAAAGCTCT

Downstream 100 bases:

>100_bases
CCGGAACAGCGCCGGCCGTCGCGTTCCCGGCCAGCCGAACTCGCTGTTCGGCGAGATCCTCGACTGGATGCTCGCGCCGC
TGCTGTTTCTGTGGCCGATC

Product: two-component response regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRILLAEDDPVIADGIVRALKRGGYAVDHVGNGAEADTAVASQPFDLLILDLGLPRLPGIEVLKRLRARKSALPVLILTA
QDGVEDRVRGLDAGADDYLTKPFALPELEARVRALTRRGTGQPRCIEVGNLSYDQADRVVKICGQVVELSAREIGLLEVF
ILRVGRLVSKDQLVDHLCGWGEEVSSNAIEVYVHRLRKKLEASGVRIVTVRGLGYCLENPDAAPTQKV

Sequences:

>Translated_228_residues
MRILLAEDDPVIADGIVRALKRGGYAVDHVGNGAEADTAVASQPFDLLILDLGLPRLPGIEVLKRLRARKSALPVLILTA
QDGVEDRVRGLDAGADDYLTKPFALPELEARVRALTRRGTGQPRCIEVGNLSYDQADRVVKICGQVVELSAREIGLLEVF
ILRVGRLVSKDQLVDHLCGWGEEVSSNAIEVYVHRLRKKLEASGVRIVTVRGLGYCLENPDAAPTQKV
>Mature_228_residues
MRILLAEDDPVIADGIVRALKRGGYAVDHVGNGAEADTAVASQPFDLLILDLGLPRLPGIEVLKRLRARKSALPVLILTA
QDGVEDRVRGLDAGADDYLTKPFALPELEARVRALTRRGTGQPRCIEVGNLSYDQADRVVKICGQVVELSAREIGLLEVF
ILRVGRLVSKDQLVDHLCGWGEEVSSNAIEVYVHRLRKKLEASGVRIVTVRGLGYCLENPDAAPTQKV

Specific function: Transcriptional activator of the tctI tricarboxylate transport system operon [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=44.954128440367, Blast_Score=179, Evalue=9e-47,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=43.1192660550459, Blast_Score=174, Evalue=4e-45,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=36.8888888888889, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=37.5565610859729, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=34.703196347032, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=37.6681614349776, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=35.1351351351351, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=34.703196347032, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=31.2775330396476, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=31.8385650224215, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=30.3571428571429, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=32.034632034632, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=26.8722466960352, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=27.7056277056277, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790299, Length=197, Percent_Identity=28.9340101522843, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788713, Length=115, Percent_Identity=35.6521739130435, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790437, Length=108, Percent_Identity=40.7407407407407, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=33.6448598130841, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24834; Mature: 24834

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLAEDDPVIADGIVRALKRGGYAVDHVGNGAEADTAVASQPFDLLILDLGLPRLPGI
CEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCCEEEEEECCCCCCCCH
EVLKRLRARKSALPVLILTAQDGVEDRVRGLDAGADDYLTKPFALPELEARVRALTRRGT
HHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCC
GQPRCIEVGNLSYDQADRVVKICGQVVELSAREIGLLEVFILRVGRLVSKDQLVDHLCGW
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEEVSSNAIEVYVHRLRKKLEASGVRIVTVRGLGYCLENPDAAPTQKV
CHHHHCHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MRILLAEDDPVIADGIVRALKRGGYAVDHVGNGAEADTAVASQPFDLLILDLGLPRLPGI
CEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCCEEEEEECCCCCCCCH
EVLKRLRARKSALPVLILTAQDGVEDRVRGLDAGADDYLTKPFALPELEARVRALTRRGT
HHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCC
GQPRCIEVGNLSYDQADRVVKICGQVVELSAREIGLLEVFILRVGRLVSKDQLVDHLCGW
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEEVSSNAIEVYVHRLRKKLEASGVRIVTVRGLGYCLENPDAAPTQKV
CHHHHCHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2666399; 11083839; 11677609 [H]