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The map label for this gene is sspB [H]

Identifier: 119897255

GI number: 119897255

Start: 1035915

End: 1036355

Strand: Direct

Name: sspB [H]

Synonym: azo0964

Alternate gene names: 119897255

Gene position: 1035915-1036355 (Clockwise)

Preceding gene: 119897254

Following gene: 119897257

Centisome position: 23.67

GC content: 64.4

Gene sequence:

>441_bases
ATGAGCAACATATCCACCAAGCCCTATCTGATCCGCGCGATCTACGAATGGTGTACCGACCAGGGATACACCCCTTACAT
CGCCGCGGTGGTCGATGAAGAAACCCGCGTGCCGCCGGGGTATGCGCGCGACGGCCAGATCGTGCTCAACGTGGGCCAGG
ACGCGACCCATCAGCTCCACATGGACAACGACCTGATCACCTTCCAGGCGCGGTTCAATGGCGTGGTCCATTCGCTGGTC
ATTCCGGTCGGCAACGTGGTTGCGATCTACGCCCGCGAGAACGGCCACGGGATGGCATTCGAGGTGGAAGGTGCCGCGGA
GGCCGATGTGGCGGGCGATGCGCCGGCCGCTTCGACGCCGGCACCCGTGCCGGTGGAAAGCAGCACGGACGGCGGTTCCC
GTCCGCCGCCGCGCGGCAACCATCTCAAGATCGTGAAGTAA

Upstream 100 bases:

>100_bases
GCTTCATCGACGCGCTGACGCCCTCCGAAAAGGTCATGCGCCGTTAAGGCGTTCGGGGCGCCCGCAGCGGCGGGCGCCGG
CCGCCAAGCAAGATTGAGTC

Downstream 100 bases:

>100_bases
GCCGGCGGCGGCCCGCGCTGCCCGCTGTCAGCTCGGGCACGCGGCGCGGACTGCCACTGGCGTCGATCCAGCGAGCGTAC
AGCCGGACCAGGCGCGCGGC

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSNISTKPYLIRAIYEWCTDQGYTPYIAAVVDEETRVPPGYARDGQIVLNVGQDATHQLHMDNDLITFQARFNGVVHSLV
IPVGNVVAIYARENGHGMAFEVEGAAEADVAGDAPAASTPAPVPVESSTDGGSRPPPRGNHLKIVK

Sequences:

>Translated_146_residues
MSNISTKPYLIRAIYEWCTDQGYTPYIAAVVDEETRVPPGYARDGQIVLNVGQDATHQLHMDNDLITFQARFNGVVHSLV
IPVGNVVAIYARENGHGMAFEVEGAAEADVAGDAPAASTPAPVPVESSTDGGSRPPPRGNHLKIVK
>Mature_145_residues
SNISTKPYLIRAIYEWCTDQGYTPYIAAVVDEETRVPPGYARDGQIVLNVGQDATHQLHMDNDLITFQARFNGVVHSLVI
PVGNVVAIYARENGHGMAFEVEGAAEADVAGDAPAASTPAPVPVESSTDGGSRPPPRGNHLKIVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=108, Percent_Identity=47.2222222222222, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 15611; Mature: 15479

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNISTKPYLIRAIYEWCTDQGYTPYIAAVVDEETRVPPGYARDGQIVLNVGQDATHQLH
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEE
MDNDLITFQARFNGVVHSLVIPVGNVVAIYARENGHGMAFEVEGAAEADVAGDAPAASTP
CCCCEEEEEEHHCCCHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
APVPVESSTDGGSRPPPRGNHLKIVK
CCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
SNISTKPYLIRAIYEWCTDQGYTPYIAAVVDEETRVPPGYARDGQIVLNVGQDATHQLH
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEE
MDNDLITFQARFNGVVHSLVIPVGNVVAIYARENGHGMAFEVEGAAEADVAGDAPAASTP
CCCCEEEEEEHHCCCHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
APVPVESSTDGGSRPPPRGNHLKIVK
CCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]