Click here to switch to the map view.

The map label for this gene is yccA [H]

Identifier: 119897202

GI number: 119897202

Start: 974987

End: 975652

Strand: Direct

Name: yccA [H]

Synonym: azo0911

Alternate gene names: 119897202

Gene position: 974987-975652 (Clockwise)

Preceding gene: 119897201

Following gene: 119897203

Centisome position: 22.28

GC content: 61.26

Gene sequence:

>666_bases
ATGGAAAACCGTGTAACTGCCCTTGGCCGGTCGGAAGCCTCGACGCTGTCGACCAACAAGGTCATCCGCAACACCTACAT
GCTGCTGTCGATGACGCTCGCGTTCTCGGCGCTCACCGCGGGTGTGTCCCTTTCGCTGGGATTGCCGCACCCGGGCATCC
TGATCACGCTGGTGGGTTATTTCGGGCTGCTGTTCCTGACCACCAAGTTCCGAAACAGCGGTCTGGGCGTGCTGTTCGTG
TTCGCGCTGACGGGCTTCATGGGCTATACGCTCGGCCCGATCCTGTCGTACTACCTGGCGCTGCCCAACGGTAGTCAGGT
GGTGATGCAGGCCATGGGCGGTACCGCAGCGATCTTCCTCGGCCTGTCGGCTTACGCCCTGACGACCCGGAAGGACTTTT
CCTTCATGGGCGGCTTCCTGATGGTAGGCATCCTGGTTGCCTTCCTGGCGGGCCTGGGCGCGGTGTTCTTCGAAATGCCG
GGCCTGTCGCTGGCGGTGTCGGCGATGTTCGTGCTGCTCATGTCGGGCCTGATCCTGTTCGAGACGAGCAACATCATCCA
CGGTGGCGAAACGAACTACGTGATGGCTACGGTGTCGCTGTACGTGTCGATCTACAACCTCTTCACGAGCCTGCTCCACC
TGCTGGGTTTCGCCAGCAACGACTGA

Upstream 100 bases:

>100_bases
CCCCGCGCGGCCCTGGCAATTTCGCAGGCGCCGGCCTGATGCGCTTCTGACAACGTCCGGCAACCGATAGACTGCAACTG
ATTTCGGAGGTGAAATTTCC

Downstream 100 bases:

>100_bases
TCGATCGGATTCGTCGTCAGTCGCCAGGGGCAGGTGCCGTTGCGGCACCTGCCCTTTCTTTTTCTGCTAGCCGCTTCGTT
CGTTGCGCCACGCCGGGCTC

Product: carrier/transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MENRVTALGRSEASTLSTNKVIRNTYMLLSMTLAFSALTAGVSLSLGLPHPGILITLVGYFGLLFLTTKFRNSGLGVLFV
FALTGFMGYTLGPILSYYLALPNGSQVVMQAMGGTAAIFLGLSAYALTTRKDFSFMGGFLMVGILVAFLAGLGAVFFEMP
GLSLAVSAMFVLLMSGLILFETSNIIHGGETNYVMATVSLYVSIYNLFTSLLHLLGFASND

Sequences:

>Translated_221_residues
MENRVTALGRSEASTLSTNKVIRNTYMLLSMTLAFSALTAGVSLSLGLPHPGILITLVGYFGLLFLTTKFRNSGLGVLFV
FALTGFMGYTLGPILSYYLALPNGSQVVMQAMGGTAAIFLGLSAYALTTRKDFSFMGGFLMVGILVAFLAGLGAVFFEMP
GLSLAVSAMFVLLMSGLILFETSNIIHGGETNYVMATVSLYVSIYNLFTSLLHLLGFASND
>Mature_221_residues
MENRVTALGRSEASTLSTNKVIRNTYMLLSMTLAFSALTAGVSLSLGLPHPGILITLVGYFGLLFLTTKFRNSGLGVLFV
FALTGFMGYTLGPILSYYLALPNGSQVVMQAMGGTAAIFLGLSAYALTTRKDFSFMGGFLMVGILVAFLAGLGAVFFEMP
GLSLAVSAMFVLLMSGLILFETSNIIHGGETNYVMATVSLYVSIYNLFTSLLHLLGFASND

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=205, Percent_Identity=29.7560975609756, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787205, Length=219, Percent_Identity=57.9908675799087, Blast_Score=243, Evalue=7e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 23514; Mature: 23514

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRVTALGRSEASTLSTNKVIRNTYMLLSMTLAFSALTAGVSLSLGLPHPGILITLVGY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHH
FGLLFLTTKFRNSGLGVLFVFALTGFMGYTLGPILSYYLALPNGSQVVMQAMGGTAAIFL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH
GLSAYALTTRKDFSFMGGFLMVGILVAFLAGLGAVFFEMPGLSLAVSAMFVLLMSGLILF
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEE
ETSNIIHGGETNYVMATVSLYVSIYNLFTSLLHLLGFASND
ECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MENRVTALGRSEASTLSTNKVIRNTYMLLSMTLAFSALTAGVSLSLGLPHPGILITLVGY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHH
FGLLFLTTKFRNSGLGVLFVFALTGFMGYTLGPILSYYLALPNGSQVVMQAMGGTAAIFL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH
GLSAYALTTRKDFSFMGGFLMVGILVAFLAGLGAVFFEMPGLSLAVSAMFVLLMSGLILF
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEE
ETSNIIHGGETNYVMATVSLYVSIYNLFTSLLHLLGFASND
ECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]