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The map label for this gene is waaA [H]

Identifier: 119897142

GI number: 119897142

Start: 915379

End: 916623

Strand: Reverse

Name: waaA [H]

Synonym: azo0851

Alternate gene names: 119897142

Gene position: 916623-915379 (Counterclockwise)

Preceding gene: 119897145

Following gene: 119897134

Centisome position: 20.95

GC content: 73.41

Gene sequence:

>1245_bases
TTGCTGTGGGCCCTTGCCCTGCCCCTCGTCGTCGCGCGTCTCGCGTGGCGCGCCCGCAAGCAGCCGGCCTATCTGCATCA
TCTCGGCGAACGGTTCGGCCGCTACGCCGCGCCGCCGGCGGCGCCGCTGATCTGGGTGCACGCGGTGTCGGTGGGTGAAA
CCCGCGCCGCCGAGCCCCTGGTGCGCGCCCTCCTTGCGCGCTGGCCGCAGCACGACGTGCTGCTCACGCACATGACACCC
ACCGGACGGGCCACCGCGCAGCAACTGTTCGACGCGGAGCCGCGGGTGCGGTCGGTCTACCTGCCCTACGACCTCGCGTG
GCTGGCGGCGCGCTTCCTGCGCCACTTCCGCCCCCGCTTCGGGGTCATCATGGAAACCGAGCTGTGGCCCAACCTGCTCG
CCACCGCCGCCCGGTCCGGCGTTCCGGTAGTGCTGGCGAACGCGCGGCTCTCGGCCCGCTCCGCCGGCCGCTACGCCCGT
TTCCCGCTGCTGTCGCGGATGACGCTCGGTGCGCTGGCCGCCACCGGGGCGCAGACCGCCGCCGACGCGGAACGACTGCA
GGCGCTGGGGGCGACCGGCGTGTCGGTCACCGGCAACATCAAGTTCGACATGGAGGCCCCGGCCGCGGCGCTCGCGCTCG
GCGCGGCGTTCCGGGCGCGCTGCGGCGAGCGTCCGGTGGTGATGGCGGCCAGCACCCGCGAAGGGGAAGAAGCGGCGCTG
CTCGACGCGTTTGCGCGCATGGCGTCGCCGGAAGCATTGCTGTTGCTCGTGCCGCGTCATCCGCAGCGCTTCGACGAGGT
CGCCGCGCTGGCTTCCGAACGCGGCCTCGCGCTGCAGCGGCGCTCCGACGGGCAGGTAGTGGCGCGCACCACGCGGGTCT
GGCTGGGCGATTCGATGGGTGAGATGTTCGCGTATTACGCCGCGGCGGATGTCGCCTTGATCGGCGGCAGCTGGCTACCC
TTCGGCGGGCAGAATCCGATCGAAGCCTGCGCGGTCGGTACGCCCGTGGTGCTCGGGCCGCACACGTTCAACTTCGAATG
GGTTGCGGATGCTGCGGTGACCGCCGGCGCCGCGCTGCGCGAGCCTGACGCGGCGGCCGGCATGGCACGGGCGCTGGAAC
TGCTGGCCGACCGACCGCGACGCACAGCCCTGGCGGAAGCCGGACGCGGCTTCGCGGCGGCGCACCGCGGCGCCACCGCA
CGCACGCTCGACCTGCTGCAGCAAGCGGACGCTGCGCGCCCTTAA

Upstream 100 bases:

>100_bases
CCGCGAGCCGAATCGTGTCCGGTTGTGAATGCCTACCCGCCCCTCTCCCCAGCGCTCGCCGCGCGCCCTCCAGGCACGCC
TCGCGTCCCTCGCCTATTCC

Downstream 100 bases:

>100_bases
GGCGCGAGCAGCGCGTTGATCGCCTGGACGTCCTCGTCGCCCAGCGTACCGGCCGCCGCCTTCAGCCGCAGTTGCGCCAG
CAGCGTGTCATAGCGTGCAC

Product: 3-deoxy-D-manno-octulosonic-acid transferase

Products: KDO2-lipid IVA; CMP; KDO1-lipid IVA [C]

Alternate protein names: KDO transferase [H]

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MLWALALPLVVARLAWRARKQPAYLHHLGERFGRYAAPPAAPLIWVHAVSVGETRAAEPLVRALLARWPQHDVLLTHMTP
TGRATAQQLFDAEPRVRSVYLPYDLAWLAARFLRHFRPRFGVIMETELWPNLLATAARSGVPVVLANARLSARSAGRYAR
FPLLSRMTLGALAATGAQTAADAERLQALGATGVSVTGNIKFDMEAPAAALALGAAFRARCGERPVVMAASTREGEEAAL
LDAFARMASPEALLLLVPRHPQRFDEVAALASERGLALQRRSDGQVVARTTRVWLGDSMGEMFAYYAAADVALIGGSWLP
FGGQNPIEACAVGTPVVLGPHTFNFEWVADAAVTAGAALREPDAAAGMARALELLADRPRRTALAEAGRGFAAAHRGATA
RTLDLLQQADAARP

Sequences:

>Translated_414_residues
MLWALALPLVVARLAWRARKQPAYLHHLGERFGRYAAPPAAPLIWVHAVSVGETRAAEPLVRALLARWPQHDVLLTHMTP
TGRATAQQLFDAEPRVRSVYLPYDLAWLAARFLRHFRPRFGVIMETELWPNLLATAARSGVPVVLANARLSARSAGRYAR
FPLLSRMTLGALAATGAQTAADAERLQALGATGVSVTGNIKFDMEAPAAALALGAAFRARCGERPVVMAASTREGEEAAL
LDAFARMASPEALLLLVPRHPQRFDEVAALASERGLALQRRSDGQVVARTTRVWLGDSMGEMFAYYAAADVALIGGSWLP
FGGQNPIEACAVGTPVVLGPHTFNFEWVADAAVTAGAALREPDAAAGMARALELLADRPRRTALAEAGRGFAAAHRGATA
RTLDLLQQADAARP
>Mature_414_residues
MLWALALPLVVARLAWRARKQPAYLHHLGERFGRYAAPPAAPLIWVHAVSVGETRAAEPLVRALLARWPQHDVLLTHMTP
TGRATAQQLFDAEPRVRSVYLPYDLAWLAARFLRHFRPRFGVIMETELWPNLLATAARSGVPVVLANARLSARSAGRYAR
FPLLSRMTLGALAATGAQTAADAERLQALGATGVSVTGNIKFDMEAPAAALALGAAFRARCGERPVVMAASTREGEEAAL
LDAFARMASPEALLLLVPRHPQRFDEVAALASERGLALQRRSDGQVVARTTRVWLGDSMGEMFAYYAAADVALIGGSWLP
FGGQNPIEACAVGTPVVLGPHTFNFEWVADAAVTAGAALREPDAAAGMARALELLADRPRRTALAEAGRGFAAAHRGATA
RTLDLLQQADAARP

Specific function: Essential step in lipopolysaccharides biosynthesis. Acts at transfer of 3-deoxy-D-mono octulonic acid (KDO) from CMP-KDO to a tetraacyldisaccharide 1,4'-bisphosphate precursor of lipid A (lipid IVA). Transfers two molecules of KDO to lipid IVA [H]

COG id: COG1519

COG function: function code M; 3-deoxy-D-manno-octulosonic-acid transferase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1790064, Length=411, Percent_Identity=41.8491484184915, Blast_Score=281, Evalue=5e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR007507 [H]

Pfam domain/function: PF00534 Glycos_transf_1; PF04413 Glycos_transf_N [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 44359; Mature: 44359

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWALALPLVVARLAWRARKQPAYLHHLGERFGRYAAPPAAPLIWVHAVSVGETRAAEPL
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHH
VRALLARWPQHDVLLTHMTPTGRATAQQLFDAEPRVRSVYLPYDLAWLAARFLRHFRPRF
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCC
GVIMETELWPNLLATAARSGVPVVLANARLSARSAGRYARFPLLSRMTLGALAATGAQTA
CEEEEHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCHHCHHHHHHHHHHHHHCCCHHH
ADAERLQALGATGVSVTGNIKFDMEAPAAALALGAAFRARCGERPVVMAASTREGEEAAL
HHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
LDAFARMASPEALLLLVPRHPQRFDEVAALASERGLALQRRSDGQVVARTTRVWLGDSMG
HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHCCCHH
EMFAYYAAADVALIGGSWLPFGGQNPIEACAVGTPVVLGPHTFNFEWVADAAVTAGAALR
HHHHHHHHHHEEEECCCCCCCCCCCCHHHHHCCCCEEECCCCCCEEEHHHHHHHCCCHHC
EPDAAAGMARALELLADRPRRTALAEAGRGFAAAHRGATARTLDLLQQADAARP
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLWALALPLVVARLAWRARKQPAYLHHLGERFGRYAAPPAAPLIWVHAVSVGETRAAEPL
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHH
VRALLARWPQHDVLLTHMTPTGRATAQQLFDAEPRVRSVYLPYDLAWLAARFLRHFRPRF
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCC
GVIMETELWPNLLATAARSGVPVVLANARLSARSAGRYARFPLLSRMTLGALAATGAQTA
CEEEEHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCHHCHHHHHHHHHHHHHCCCHHH
ADAERLQALGATGVSVTGNIKFDMEAPAAALALGAAFRARCGERPVVMAASTREGEEAAL
HHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
LDAFARMASPEALLLLVPRHPQRFDEVAALASERGLALQRRSDGQVVARTTRVWLGDSMG
HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHCCCHH
EMFAYYAAADVALIGGSWLPFGGQNPIEACAVGTPVVLGPHTFNFEWVADAAVTAGAALR
HHHHHHHHHHEEEECCCCCCCCCCCCHHHHHCCCCEEECCCCCCEEEHHHHHHHCCCHHC
EPDAAAGMARALELLADRPRRTALAEAGRGFAAAHRGATARTLDLLQQADAARP
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: KDO1-lipid IVA; CMP-3-deoxy-D-manno-octulosonate; lipid IVA [C]

Specific reaction: KDO1-lipid IVA + CMP-3-deoxy-D-manno-octulosonate = KDO2-lipid IVA + CMP CMP-3-deoxy-D-manno-octulosonate + lipid IVA = KDO1-lipid IVA + CMP [C]

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]