| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is nagZ1 [H]
Identifier: 119896992
GI number: 119896992
Start: 747598
End: 748953
Strand: Reverse
Name: nagZ1 [H]
Synonym: azo0701
Alternate gene names: 119896992
Gene position: 748953-747598 (Counterclockwise)
Preceding gene: 119896993
Following gene: 119896991
Centisome position: 17.11
GC content: 75.0
Gene sequence:
>1356_bases GTGAGGGCCGGCGCGCGTCTGCTGCGCTGGGGCAGCGCGGCGCTCGCCCTGCTGCTGGCGCACGATCCGCACACGCCCTA CCTGCTCGCGGTGCGCGGCGTCATCGTGCCCGCGCTGGTCGTCGCGGGCGTACTCGGCGCGGCGTGGGCGGGGCGCGCCG CCTGCCGCCGGCGGCTGGCGTGGCGCGAGGCCGCCGCGCTCGCCGCAGCCGGGATCACGGTGGCGACGCTGGCGCTGGCC GATGCCCACCGCTTTGCCGCAGCCCGCCTGGAAGTGCTCGCGGCAGGCGCGTCAGACCCGCAGCTGCGCCGCCTCGGCGC CCACTTCATGATCGGCTACCGCGATGCGGACGAAGTCGCGGCGCTCGCCGAGCGCGGCCTCATCGGCGGCATCTACCTCG GCCGCCACAACGTGCGCGGGCGCAGCGTCGAAGCCGTGCGGGCGGAGATCGACCGGCTGCAGGCTCTGCGCGCGCGCAAC GCGCTGCCGCCGCTGATCGTCGCGGCCGACCAGGAAGGCGGCAGCGTCGCGCACATGAGCCCGCCGCTGGCGCCGCAGCC CGCGCTGGCCAGCGTGCTCGCGGGCGACGACGCGGGGCTGGAAATGCGGGCGCGCGACTATGGCCGTCTGCAAGGGGCAG GGCTCGCAGCACTGGGCGTGACGCTGAATTTCGGCCCGGTGGTCGATCTGCGCCCCGCGCACGGCGGGCCGCTGTTCGAC ACCCATACCCGTATCGGCGAACGCGCCATCGACGGCGATCCGGCGCGGGTCGCGCGGGTGGCCCGCGCCTATGCCGAAGG GCTGGCCGACGCCGGCGTGCAGGCGACCCTGAAGCACTTCCCGGGGCTGGGTGGCGTCATGCGCGACACCCATCACTTTG CCGCCCGCCTCGACACCCCGGGCGCGGCGCTCGCAGCGCACGACTGGCAGGCGTTTCGCGGCGCCGCGCCCGCCAGTGCC GCGATCATGGTCGGCCACGTGGTGCTGCCGGAGCTGGACGCCGACCGACCGGCATCGCTCTCGCCCGCAGTGGTGCAGGG GCTGCTGCGGCGCGGCTGGGGCTACCAGGGCCTGCTGGTCACCGACGACCTCAACATGGGCGCGGTGTATCGCCGCGGCA CCTGCCGCGCGGCGGTGGAGGCGCTGGAAGCCGGCATCGACCTGGTCCTGATTTCCTACGATCCGGCGCAGTTCTACCGT GCACTGCTGTGTGCGCGCCGCGCCTTCGACGAAGGCCGGCTGCAGCCGGCATTGCTCGCCGCGGGGCGCCGTCGGCTCGC CGCCGCGGCGCACTTATCCACAGCCGCCGGTGGACAAGCTGTGCGCGAAATGTGGACGCAGGCCGCAAGCCCTTGA
Upstream 100 bases:
>100_bases TGGGCGCGCTGCTGCTGTTCGCCGCGCTCGCCGCCAGCATGCTCGCCACCCGCCGCATCGACTGGTACCGCCTCGGCGCG ACGGCGCCGGGAGAGGCCGC
Downstream 100 bases:
>100_bases ACCGGCGGGATACGCGACGCCTGAAACGGCCTGTCCGTCGGTGGCGATTTGACGGCCACCCGGGCCTCTGCTTTGCTGGA GCCAGGAAGCAAAAAAACCG
Product: putative beta-hexosaminidase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MRAGARLLRWGSAALALLLAHDPHTPYLLAVRGVIVPALVVAGVLGAAWAGRAACRRRLAWREAAALAAAGITVATLALA DAHRFAAARLEVLAAGASDPQLRRLGAHFMIGYRDADEVAALAERGLIGGIYLGRHNVRGRSVEAVRAEIDRLQALRARN ALPPLIVAADQEGGSVAHMSPPLAPQPALASVLAGDDAGLEMRARDYGRLQGAGLAALGVTLNFGPVVDLRPAHGGPLFD THTRIGERAIDGDPARVARVARAYAEGLADAGVQATLKHFPGLGGVMRDTHHFAARLDTPGAALAAHDWQAFRGAAPASA AIMVGHVVLPELDADRPASLSPAVVQGLLRRGWGYQGLLVTDDLNMGAVYRRGTCRAAVEALEAGIDLVLISYDPAQFYR ALLCARRAFDEGRLQPALLAAGRRRLAAAAHLSTAAGGQAVREMWTQAASP
Sequences:
>Translated_451_residues MRAGARLLRWGSAALALLLAHDPHTPYLLAVRGVIVPALVVAGVLGAAWAGRAACRRRLAWREAAALAAAGITVATLALA DAHRFAAARLEVLAAGASDPQLRRLGAHFMIGYRDADEVAALAERGLIGGIYLGRHNVRGRSVEAVRAEIDRLQALRARN ALPPLIVAADQEGGSVAHMSPPLAPQPALASVLAGDDAGLEMRARDYGRLQGAGLAALGVTLNFGPVVDLRPAHGGPLFD THTRIGERAIDGDPARVARVARAYAEGLADAGVQATLKHFPGLGGVMRDTHHFAARLDTPGAALAAHDWQAFRGAAPASA AIMVGHVVLPELDADRPASLSPAVVQGLLRRGWGYQGLLVTDDLNMGAVYRRGTCRAAVEALEAGIDLVLISYDPAQFYR ALLCARRAFDEGRLQPALLAAGRRRLAAAAHLSTAAGGQAVREMWTQAASP >Mature_451_residues MRAGARLLRWGSAALALLLAHDPHTPYLLAVRGVIVPALVVAGVLGAAWAGRAACRRRLAWREAAALAAAGITVATLALA DAHRFAAARLEVLAAGASDPQLRRLGAHFMIGYRDADEVAALAERGLIGGIYLGRHNVRGRSVEAVRAEIDRLQALRARN ALPPLIVAADQEGGSVAHMSPPLAPQPALASVLAGDDAGLEMRARDYGRLQGAGLAALGVTLNFGPVVDLRPAHGGPLFD THTRIGERAIDGDPARVARVARAYAEGLADAGVQATLKHFPGLGGVMRDTHHFAARLDTPGAALAAHDWQAFRGAAPASA AIMVGHVVLPELDADRPASLSPAVVQGLLRRGWGYQGLLVTDDLNMGAVYRRGTCRAAVEALEAGIDLVLISYDPAQFYR ALLCARRAFDEGRLQPALLAAGRRRLAAAAHLSTAAGGQAVREMWTQAASP
Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=289, Percent_Identity=31.8339100346021, Blast_Score=108, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022956 - InterPro: IPR019800 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 47174; Mature: 47174
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGARLLRWGSAALALLLAHDPHTPYLLAVRGVIVPALVVAGVLGAAWAGRAACRRRLA CCCCHHHHHHHHHHHEEHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WREAAALAAAGITVATLALADAHRFAAARLEVLAAGASDPQLRRLGAHFMIGYRDADEVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCHHHHH ALAERGLIGGIYLGRHNVRGRSVEAVRAEIDRLQALRARNALPPLIVAADQEGGSVAHMS HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECC PPLAPQPALASVLAGDDAGLEMRARDYGRLQGAGLAALGVTLNFGPVVDLRPAHGGPLFD CCCCCCHHHHHHHCCCCCCCEEHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCC THTRIGERAIDGDPARVARVARAYAEGLADAGVQATLKHFPGLGGVMRDTHHFAARLDTP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCC GAALAAHDWQAFRGAAPASAAIMVGHVVLPELDADRPASLSPAVVQGLLRRGWGYQGLLV CCCHHHCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE TDDLNMGAVYRRGTCRAAVEALEAGIDLVLISYDPAQFYRALLCARRAFDEGRLQPALLA ECCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHH AGRRRLAAAAHLSTAAGGQAVREMWTQAASP HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MRAGARLLRWGSAALALLLAHDPHTPYLLAVRGVIVPALVVAGVLGAAWAGRAACRRRLA CCCCHHHHHHHHHHHEEHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WREAAALAAAGITVATLALADAHRFAAARLEVLAAGASDPQLRRLGAHFMIGYRDADEVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCHHHHH ALAERGLIGGIYLGRHNVRGRSVEAVRAEIDRLQALRARNALPPLIVAADQEGGSVAHMS HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECC PPLAPQPALASVLAGDDAGLEMRARDYGRLQGAGLAALGVTLNFGPVVDLRPAHGGPLFD CCCCCCHHHHHHHCCCCCCCEEHHHHHCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCC THTRIGERAIDGDPARVARVARAYAEGLADAGVQATLKHFPGLGGVMRDTHHFAARLDTP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCC GAALAAHDWQAFRGAAPASAAIMVGHVVLPELDADRPASLSPAVVQGLLRRGWGYQGLLV CCCHHHCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE TDDLNMGAVYRRGTCRAAVEALEAGIDLVLISYDPAQFYRALLCARRAFDEGRLQPALLA ECCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHH AGRRRLAAAAHLSTAAGGQAVREMWTQAASP HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA