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The map label for this gene is ypfJ [H]

Identifier: 119896982

GI number: 119896982

Start: 734005

End: 734865

Strand: Direct

Name: ypfJ [H]

Synonym: azo0691

Alternate gene names: 119896982

Gene position: 734005-734865 (Clockwise)

Preceding gene: 119896981

Following gene: 119896987

Centisome position: 16.77

GC content: 70.96

Gene sequence:

>861_bases
ATGCGTTTCGATCACGGCAGGGAAAGCGACAACATCGAGGACCGGCGCGGCGAAGGCGGCGGCGGATTCCGGCTCGGGGG
CGGTGGAAAGCTCGGCCTCGGCGGCATCGTGCTGACGCTGGTCGCGCTTTACTTCGGCGTCGATCCGGCGCTGCTGCTGC
AGACCGCCGAGGTCGTGCGCCCGCCGGCGGCGGTCGAGCGGCCCGCCAGCCGCCCGCAGGACGAAGCGGGGCGCTTTGTT
TCGATGGTGCTGGCCGACACCGAGGACACCTGGAGCGACATCTTCAGCGGCGCCGGGCGCACCTACCAGGCGCCGCGGCT
GGTGCTGTTCTCCGGCGTCACGGGCACCGCCTGCGGCACCGGCCAGGCGGCGATGGGTCCGTTCTACTGTCCCGCCGACC
AGAAGGTCTATATCGACCTCAGCTTCTACGACGATCTCCAGCAGCGCTTCCGCGCACCCGGCGATTTCGCCCAGGCCTAC
GTGATCGCCCACGAGATCGGCCACCACGTGCAGAACCTGCTCGGCGTTTCCGAGCGCGCGCAGCGCGCCCGCGCCCGGCT
TTCACCGCGCGAGAGCAATGCGTTGTCGGTGCGGCTGGAACTGCAGGCGGACTGCTTTGCCGGGGTCTGGGCCCACCATG
CCGACCGTTCGCGCCAGGTGCTGGAGGCGGGCGACGTGGAAGAAGCGCTGACGGCGGCCGCCGCGATCGGCGACGACCGC
CTGCAGAAGCAAGCGCAGGGCTATGCGGTGCCGGACAGCTTCACGCACGGCAGCGCGGAACAGCGGGTGCGCTGGTTCCG
CACCGGCCTGCAGCACGGCAGCCTGCAGGCCTGCGACACCTTCGCCGCGCGCTCGCCCTGA

Upstream 100 bases:

>100_bases
CCTAGCACGGGTCACGAACCGGCTCCTTGGGAAGCGGCGCCGCTGTTCCATAATGGAAGCACGACCGGGGCGCGGCCCCG
CGGCAGGCGAGGGCCCACGG

Downstream 100 bases:

>100_bases
GCGCACGGCCGCCCGGCCGTCTCAGCCGGCGAGGCGGGCGAAGGCTTCGACCACCTCCGGCGGTGCCTGCACCAGTTCCA
CCAGCACGCCCTCGCCGCCG

Product: metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRFDHGRESDNIEDRRGEGGGGFRLGGGGKLGLGGIVLTLVALYFGVDPALLLQTAEVVRPPAAVERPASRPQDEAGRFV
SMVLADTEDTWSDIFSGAGRTYQAPRLVLFSGVTGTACGTGQAAMGPFYCPADQKVYIDLSFYDDLQQRFRAPGDFAQAY
VIAHEIGHHVQNLLGVSERAQRARARLSPRESNALSVRLELQADCFAGVWAHHADRSRQVLEAGDVEEALTAAAAIGDDR
LQKQAQGYAVPDSFTHGSAEQRVRWFRTGLQHGSLQACDTFAARSP

Sequences:

>Translated_286_residues
MRFDHGRESDNIEDRRGEGGGGFRLGGGGKLGLGGIVLTLVALYFGVDPALLLQTAEVVRPPAAVERPASRPQDEAGRFV
SMVLADTEDTWSDIFSGAGRTYQAPRLVLFSGVTGTACGTGQAAMGPFYCPADQKVYIDLSFYDDLQQRFRAPGDFAQAY
VIAHEIGHHVQNLLGVSERAQRARARLSPRESNALSVRLELQADCFAGVWAHHADRSRQVLEAGDVEEALTAAAAIGDDR
LQKQAQGYAVPDSFTHGSAEQRVRWFRTGLQHGSLQACDTFAARSP
>Mature_286_residues
MRFDHGRESDNIEDRRGEGGGGFRLGGGGKLGLGGIVLTLVALYFGVDPALLLQTAEVVRPPAAVERPASRPQDEAGRFV
SMVLADTEDTWSDIFSGAGRTYQAPRLVLFSGVTGTACGTGQAAMGPFYCPADQKVYIDLSFYDDLQQRFRAPGDFAQAY
VIAHEIGHHVQNLLGVSERAQRARARLSPRESNALSVRLELQADCFAGVWAHHADRSRQVLEAGDVEEALTAAAAIGDDR
LQKQAQGYAVPDSFTHGSAEQRVRWFRTGLQHGSLQACDTFAARSP

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=287, Percent_Identity=53.6585365853659, Blast_Score=298, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 30918; Mature: 30918

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDHGRESDNIEDRRGEGGGGFRLGGGGKLGLGGIVLTLVALYFGVDPALLLQTAEVVR
CCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC
PPAAVERPASRPQDEAGRFVSMVLADTEDTWSDIFSGAGRTYQAPRLVLFSGVTGTACGT
CCHHHCCCCCCCHHHHHHEEHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC
GQAAMGPFYCPADQKVYIDLSFYDDLQQRFRAPGDFAQAYVIAHEIGHHVQNLLGVSERA
CCCCCCCEECCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QRARARLSPRESNALSVRLELQADCFAGVWAHHADRSRQVLEAGDVEEALTAAAAIGDDR
HHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHH
LQKQAQGYAVPDSFTHGSAEQRVRWFRTGLQHGSLQACDTFAARSP
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MRFDHGRESDNIEDRRGEGGGGFRLGGGGKLGLGGIVLTLVALYFGVDPALLLQTAEVVR
CCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC
PPAAVERPASRPQDEAGRFVSMVLADTEDTWSDIFSGAGRTYQAPRLVLFSGVTGTACGT
CCHHHCCCCCCCHHHHHHEEHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC
GQAAMGPFYCPADQKVYIDLSFYDDLQQRFRAPGDFAQAYVIAHEIGHHVQNLLGVSERA
CCCCCCCEECCCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QRARARLSPRESNALSVRLELQADCFAGVWAHHADRSRQVLEAGDVEEALTAAAAIGDDR
HHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHH
LQKQAQGYAVPDSFTHGSAEQRVRWFRTGLQHGSLQACDTFAARSP
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]