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The map label for this gene is napC1 [H]

Identifier: 119896960

GI number: 119896960

Start: 704566

End: 705237

Strand: Reverse

Name: napC1 [H]

Synonym: azo0669

Alternate gene names: 119896960

Gene position: 705237-704566 (Counterclockwise)

Preceding gene: 119896961

Following gene: 119896953

Centisome position: 16.12

GC content: 66.82

Gene sequence:

>672_bases
ATGTTCGGCCTTCTGAAGCGGTACTGGCGGGTGATCCGCCGCCCCAGCACGCACTACAGCCTGGGTCTGCTGGTGATCGG
CGGCTTTGTCGGCGGGGTGTTGTTCTGGGGCGGCTTCAACACCGCGCTGGAAGCCACCAACACCGAGCCGTTCTGCACCA
GTTGCCACGAGATGTACGACAACGTCTACCAGGAGCTGCAGCCCACCATCCACTTCACCAACCGCAGCGGGGTGCGCGCC
ACCTGCCCGGACTGCCACGTGCCGCACCGCTGGACGGCCAAGATCGCGCGCAAGATGCAGGCGTCGAAGGAGGTGTGGGG
CAAGGTGTTCGGCACCATCTCGACGCGCGAGAAGTTCGAGGGCATGCGCCTGGCGCTGGCGGTCAACGAATGGCGCCGGC
TCAAGGCCAACAACTCGCTGGAATGCCGCAACTGCCACCAGTTCAACTCGATGGACTTCACCCGCCAGAGCCCGCGCGCG
CAACACGCACATTCCACTTCGCTGGCCAAGGGCGAACGCACCTGCATCGACTGCCACATCGGCATCGCCCACCGCCTGCC
CAACCTGGAAGGCGTGGACAGGCTGGTCGAAGCCCATGGCGGGCGCAACGTGCTGCCGGCGCTGGTCAGCGGCGGACTGC
AGGAGGACATGGCGCCGCCCGCGCCGCGGTGA

Upstream 100 bases:

>100_bases
CAATCCGATCGTGGAGAACCGCTTCATCGACGTCGAAACCATGCTCAGGCGCGGCGGCTCCGCCTCCACGCTGCCCGAGC
AACGCTGAGCGGAGGCGCCC

Downstream 100 bases:

>100_bases
GTGACGGCGGGCAGCGCCGCTACGGCACCCACCAGTAGCGGACAATGTGGAAGAACACCGGGGCGGAGAAGCTGATCGAA
TCGACGCGGTCAAGCATGCC

Product: cytochrome C-type protein NapC

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MFGLLKRYWRVIRRPSTHYSLGLLVIGGFVGGVLFWGGFNTALEATNTEPFCTSCHEMYDNVYQELQPTIHFTNRSGVRA
TCPDCHVPHRWTAKIARKMQASKEVWGKVFGTISTREKFEGMRLALAVNEWRRLKANNSLECRNCHQFNSMDFTRQSPRA
QHAHSTSLAKGERTCIDCHIGIAHRLPNLEGVDRLVEAHGGRNVLPALVSGGLQEDMAPPAPR

Sequences:

>Translated_223_residues
MFGLLKRYWRVIRRPSTHYSLGLLVIGGFVGGVLFWGGFNTALEATNTEPFCTSCHEMYDNVYQELQPTIHFTNRSGVRA
TCPDCHVPHRWTAKIARKMQASKEVWGKVFGTISTREKFEGMRLALAVNEWRRLKANNSLECRNCHQFNSMDFTRQSPRA
QHAHSTSLAKGERTCIDCHIGIAHRLPNLEGVDRLVEAHGGRNVLPALVSGGLQEDMAPPAPR
>Mature_223_residues
MFGLLKRYWRVIRRPSTHYSLGLLVIGGFVGGVLFWGGFNTALEATNTEPFCTSCHEMYDNVYQELQPTIHFTNRSGVRA
TCPDCHVPHRWTAKIARKMQASKEVWGKVFGTISTREKFEGMRLALAVNEWRRLKANNSLECRNCHQFNSMDFTRQSPRA
QHAHSTSLAKGERTCIDCHIGIAHRLPNLEGVDRLVEAHGGRNVLPALVSGGLQEDMAPPAPR

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=191, Percent_Identity=57.5916230366492, Blast_Score=240, Evalue=5e-65,
Organism=Escherichia coli, GI1787230, Length=186, Percent_Identity=41.3978494623656, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI1788181, Length=152, Percent_Identity=42.1052631578947, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 25129; Mature: 25129

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLLKRYWRVIRRPSTHYSLGLLVIGGFVGGVLFWGGFNTALEATNTEPFCTSCHEMYD
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHH
NVYQELQPTIHFTNRSGVRATCPDCHVPHRWTAKIARKMQASKEVWGKVFGTISTREKFE
HHHHHHCCCEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
GMRLALAVNEWRRLKANNSLECRNCHQFNSMDFTRQSPRAQHAHSTSLAKGERTCIDCHI
CEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC
GIAHRLPNLEGVDRLVEAHGGRNVLPALVSGGLQEDMAPPAPR
HHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure
MFGLLKRYWRVIRRPSTHYSLGLLVIGGFVGGVLFWGGFNTALEATNTEPFCTSCHEMYD
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHH
NVYQELQPTIHFTNRSGVRATCPDCHVPHRWTAKIARKMQASKEVWGKVFGTISTREKFE
HHHHHHCCCEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
GMRLALAVNEWRRLKANNSLECRNCHQFNSMDFTRQSPRAQHAHSTSLAKGERTCIDCHI
CEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC
GIAHRLPNLEGVDRLVEAHGGRNVLPALVSGGLQEDMAPPAPR
HHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7639719 [H]