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The map label for this gene is glpC [H]

Identifier: 119896929

GI number: 119896929

Start: 666529

End: 667926

Strand: Direct

Name: glpC [H]

Synonym: azo0638

Alternate gene names: 119896929

Gene position: 666529-667926 (Clockwise)

Preceding gene: 119896928

Following gene: 119896930

Centisome position: 15.23

GC content: 72.1

Gene sequence:

>1398_bases
ATGGAAACCAAACTCGACTGGTCCGCCTACGACAACACTGGCATGGGCGACCCCTTCGGTGCCGATCCTTTCGGTGCCGG
CTCATTCGGCGGCGACGCGTTCGGCGCAGCGGCGGCGCCCGTGGCGGGCGGTGCTTTCGGCAAGGCGGTGGCGCTGTGCA
CCGGCAATCGCGCCTGCCTGCGCACCGACAGTCCCGGCGTGATGTGTCCCAGCTTTCGCGCCACGGAAGATCCGCTCCAT
TCCACCCGCGGGCGGATCGAAGCGCTCAATGCCGCGCTCGCCGGCGCGGACGACGCCGTGGATTTCAGCGATCCGCGACT
CGCGGAGGCCATGGCGCTGTGCCTGTCCTGCAAGGGCTGCAAGCGCGAGTGCCCGAACGGGGTGGATATGGCCCTGCTGC
GCGCCGAGTACCTCGCCCAGCGTAACGCGCGCGAGGGCGTGCCCGCGCAGGCGCGCCTGCTGGCGTCCTTCACCGACCAC
CTCGCGGCCTATCCCGCGTTGCGCTGGCTGGTCGCGCTGCGAAACCGGGTCGCCCCGCTTGCGGCGCTCGGCGAGCGCTG
GTGGGGCATCGCAGGCGATCGCCGCCTGCCGGCGCCGGCCGCGCGTCCCTTCAAGGAGGCATCCCCCGCTTCGGTTCCTG
CCGAGGGGCCGCAGGTTGCGCTGCTGGTCGATAGCTTCTGCCGCCATTTCGAGCCCGGCGTGGCCGAGGCTGCGCTCGCG
GTACTGCGCGCCGCGGGTTACCGGGTGACGGTGCTTGCGCCGGCGGCGGATGACGCCAACCCGACCCGCCCGCTGTGCTG
CGGCCGTTCCAAGCTCTCGTTCGGGCTGGTGGACGACGCGCGTGCCGAGGCCCGTCGCATGATGGCCGCGTTGGCGCCGG
CGCTCGCGGCGCGCATCCCCGTCGTCGGGCTGGAGCCGTCGTGCCTGTTCATGCTCAAGGACGAGTACTTCAGCCTGGGG
CTGGGACCGGACGTGGGACGGCTTGCCGGGCAGGTCTTCCTGTTCGAGGAGTTCCTCGCGCGCGAGCACGCCGCCGGCCG
GCTGCGCCTCGCACTGAAGCCGCTGGATCTGCCGCCGGCGCTTGTGCACGGCCATTGCCACCAGAAGGCCTACGGCGCGA
TGCCGGCGGTCAGCACGGTCCTCGGGCTGATTCCCGGCTTTTCGTTCGGGATGATCGACAGTGGCTGCTGTGGCATGGCC
GGCAGCTTCGGCCTGCAGGCCCGCAACCAGGCGGTTTCCCGCAAGCTGGCGGAGGCGGCACTGCTGCCGGCGGTGCGCGC
CGCCGAGCCGGAGGCCCCGGTGGTGGCGGACGGATTTTCGTGTCGCCACCAGATCCGCGACGGCGCCGGCCGCCGCCCCG
TGCATGTGGCCGAGTTGCTGCAGCGCGCGCTGGCCTGA

Upstream 100 bases:

>100_bases
TAAACCCGACAGCCGTTCGCGGTGCAATCGCCCATGCGGGCCTCCTCCGCGTCCATTCGAGTTGGCCTCCGGCTTGCTTG
AATGCTCGCGGAGGTTATGC

Downstream 100 bases:

>100_bases
ACCGGGGTGGCCGATCTTCGGGCCTGTTGCGCCAGATCAAATCTGCGTTCGGGCATGGCCTGGAAAATGCTTTTAGGTAC
CCAGGTACGAAATTTTCGTG

Product: hypothetical protein

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: G-3-P dehydrogenase [H]

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
METKLDWSAYDNTGMGDPFGADPFGAGSFGGDAFGAAAAPVAGGAFGKAVALCTGNRACLRTDSPGVMCPSFRATEDPLH
STRGRIEALNAALAGADDAVDFSDPRLAEAMALCLSCKGCKRECPNGVDMALLRAEYLAQRNAREGVPAQARLLASFTDH
LAAYPALRWLVALRNRVAPLAALGERWWGIAGDRRLPAPAARPFKEASPASVPAEGPQVALLVDSFCRHFEPGVAEAALA
VLRAAGYRVTVLAPAADDANPTRPLCCGRSKLSFGLVDDARAEARRMMAALAPALAARIPVVGLEPSCLFMLKDEYFSLG
LGPDVGRLAGQVFLFEEFLAREHAAGRLRLALKPLDLPPALVHGHCHQKAYGAMPAVSTVLGLIPGFSFGMIDSGCCGMA
GSFGLQARNQAVSRKLAEAALLPAVRAAEPEAPVVADGFSCRHQIRDGAGRRPVHVAELLQRALA

Sequences:

>Translated_465_residues
METKLDWSAYDNTGMGDPFGADPFGAGSFGGDAFGAAAAPVAGGAFGKAVALCTGNRACLRTDSPGVMCPSFRATEDPLH
STRGRIEALNAALAGADDAVDFSDPRLAEAMALCLSCKGCKRECPNGVDMALLRAEYLAQRNAREGVPAQARLLASFTDH
LAAYPALRWLVALRNRVAPLAALGERWWGIAGDRRLPAPAARPFKEASPASVPAEGPQVALLVDSFCRHFEPGVAEAALA
VLRAAGYRVTVLAPAADDANPTRPLCCGRSKLSFGLVDDARAEARRMMAALAPALAARIPVVGLEPSCLFMLKDEYFSLG
LGPDVGRLAGQVFLFEEFLAREHAAGRLRLALKPLDLPPALVHGHCHQKAYGAMPAVSTVLGLIPGFSFGMIDSGCCGMA
GSFGLQARNQAVSRKLAEAALLPAVRAAEPEAPVVADGFSCRHQIRDGAGRRPVHVAELLQRALA
>Mature_465_residues
METKLDWSAYDNTGMGDPFGADPFGAGSFGGDAFGAAAAPVAGGAFGKAVALCTGNRACLRTDSPGVMCPSFRATEDPLH
STRGRIEALNAALAGADDAVDFSDPRLAEAMALCLSCKGCKRECPNGVDMALLRAEYLAQRNAREGVPAQARLLASFTDH
LAAYPALRWLVALRNRVAPLAALGERWWGIAGDRRLPAPAARPFKEASPASVPAEGPQVALLVDSFCRHFEPGVAEAALA
VLRAAGYRVTVLAPAADDANPTRPLCCGRSKLSFGLVDDARAEARRMMAALAPALAARIPVVGLEPSCLFMLKDEYFSLG
LGPDVGRLAGQVFLFEEFLAREHAAGRLRLALKPLDLPPALVHGHCHQKAYGAMPAVSTVLGLIPGFSFGMIDSGCCGMA
GSFGLQARNQAVSRKLAEAALLPAVRAAEPEAPVVADGFSCRHQIRDGAGRRPVHVAELLQRALA

Specific function: Electron transfer protein; may also function as the membrane anchor for the glpAB dimer [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Note=Loosely bound to the cytoplasmic membrane often occurring in vesicles associated with fumarate reductase [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=368, Percent_Identity=27.9891304347826, Blast_Score=116, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR017753
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 48786; Mature: 48786

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKLDWSAYDNTGMGDPFGADPFGAGSFGGDAFGAAAAPVAGGAFGKAVALCTGNRACL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHCCCCCCCHHCEEEEECCCCEEE
RTDSPGVMCPSFRATEDPLHSTRGRIEALNAALAGADDAVDFSDPRLAEAMALCLSCKGC
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCH
KRECPNGVDMALLRAEYLAQRNAREGVPAQARLLASFTDHLAAYPALRWLVALRNRVAPL
HHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALGERWWGIAGDRRLPAPAARPFKEASPASVPAEGPQVALLVDSFCRHFEPGVAEAALA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHH
VLRAAGYRVTVLAPAADDANPTRPLCCGRSKLSFGLVDDARAEARRMMAALAPALAARIP
HHHHCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
VVGLEPSCLFMLKDEYFSLGLGPDVGRLAGQVFLFEEFLAREHAAGRLRLALKPLDLPPA
EECCCCCEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHH
LVHGHCHQKAYGAMPAVSTVLGLIPGFSFGMIDSGCCGMAGSFGLQARNQAVSRKLAEAA
HHHCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LLPAVRAAEPEAPVVADGFSCRHQIRDGAGRRPVHVAELLQRALA
HHHHHHCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
METKLDWSAYDNTGMGDPFGADPFGAGSFGGDAFGAAAAPVAGGAFGKAVALCTGNRACL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHCCCCCCCHHCEEEEECCCCEEE
RTDSPGVMCPSFRATEDPLHSTRGRIEALNAALAGADDAVDFSDPRLAEAMALCLSCKGC
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCH
KRECPNGVDMALLRAEYLAQRNAREGVPAQARLLASFTDHLAAYPALRWLVALRNRVAPL
HHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALGERWWGIAGDRRLPAPAARPFKEASPASVPAEGPQVALLVDSFCRHFEPGVAEAALA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHH
VLRAAGYRVTVLAPAADDANPTRPLCCGRSKLSFGLVDDARAEARRMMAALAPALAARIP
HHHHCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
VVGLEPSCLFMLKDEYFSLGLGPDVGRLAGQVFLFEEFLAREHAAGRLRLALKPLDLPPA
EECCCCCEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHH
LVHGHCHQKAYGAMPAVSTVLGLIPGFSFGMIDSGCCGMAGSFGLQARNQAVSRKLAEAA
HHHCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LLPAVRAAEPEAPVVADGFSCRHQIRDGAGRRPVHVAELLQRALA
HHHHHHCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]