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The map label for this gene is ycgM [H]

Identifier: 119896910

GI number: 119896910

Start: 646348

End: 647070

Strand: Direct

Name: ycgM [H]

Synonym: azo0619

Alternate gene names: 119896910

Gene position: 646348-647070 (Clockwise)

Preceding gene: 119896900

Following gene: 119896915

Centisome position: 14.77

GC content: 69.43

Gene sequence:

>723_bases
ATGTCTGAAAAGCACGAAGCATTCCACGTGATTCCGCCTGCTCCGCAGCCCGTCGTGCCGGTGCTGGGAGGCGGTGTGTT
CCCGGTGCGCCGGATCTTCTGCGTGGCCCGCAACTACGCCGCACACGCGCGCGAAATGGGTGGCGACCCGGCGCGCGAGG
CCCCGTTCTTCTTTACCAAGCCGGCCGATGCGGTGCTCCCCGTGGGCGAAGGCGAGTGTGGTCGGATGTCCTACCCTGTG
GCGACTTCCGACCTACATCACGAACTCGAACTGGTGGTGGCGCTCGCGGCCGGCGGTAGCGGTCTGACGCCGGAGCAGGC
GGCGGGCTGCATTTACGGCTATGCGGTAGGGCTGGACATGACGCGCCGCGATCTGCAGGCAGCGGCCAAGGCCGCGAGGC
GGCCGTGGGATGCGGGCAAGGCCTTCGACCATTCGGCGCCCATCTCGCCGATCCGGCCGCTGGCGGAGGTTCTTGCCGCC
GGTGAGATCGTGCTGGACGTCAACGGCGTGCGGCGCCAGGCGGGCGATCTGGCCGACATGATCTGGAACGTGCCGGAAAC
GCTGGCCTTCCTGTCGCGCTACTTCGAGTTGAGGGCCGGGGATCTGGTGTTTACCGGCACGCCGGAGGGCGTGGGCGCGG
TGGCGGCGGGCGATCGTCTGCACGGCCGCATCGCGCGCGTCGGCGAGCTGCGGCTGGAGATCGTCGCCCCGCAGCACGCC
TGA

Upstream 100 bases:

>100_bases
GCTCCTTCGGGATACCGGTGCCCGGCTGGACCGGACATTCCGGCGCTGGTCACAATACCGGTCACCGCCGACTGGCGTGG
TCGTTCCCGAGGTGATCTGA

Downstream 100 bases:

>100_bases
CGACGCGGATCAAGGCAGCCGCAACAGCACGCGCAGGCGGTCGTCGGGGCTGCCGACGGGCAGGTAGCCGATGGTGCCGG
GGCGGGTCGCGATCCAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSEKHEAFHVIPPAPQPVVPVLGGGVFPVRRIFCVARNYAAHAREMGGDPAREAPFFFTKPADAVLPVGEGECGRMSYPV
ATSDLHHELELVVALAAGGSGLTPEQAAGCIYGYAVGLDMTRRDLQAAAKAARRPWDAGKAFDHSAPISPIRPLAEVLAA
GEIVLDVNGVRRQAGDLADMIWNVPETLAFLSRYFELRAGDLVFTGTPEGVGAVAAGDRLHGRIARVGELRLEIVAPQHA

Sequences:

>Translated_240_residues
MSEKHEAFHVIPPAPQPVVPVLGGGVFPVRRIFCVARNYAAHAREMGGDPAREAPFFFTKPADAVLPVGEGECGRMSYPV
ATSDLHHELELVVALAAGGSGLTPEQAAGCIYGYAVGLDMTRRDLQAAAKAARRPWDAGKAFDHSAPISPIRPLAEVLAA
GEIVLDVNGVRRQAGDLADMIWNVPETLAFLSRYFELRAGDLVFTGTPEGVGAVAAGDRLHGRIARVGELRLEIVAPQHA
>Mature_239_residues
SEKHEAFHVIPPAPQPVVPVLGGGVFPVRRIFCVARNYAAHAREMGGDPAREAPFFFTKPADAVLPVGEGECGRMSYPVA
TSDLHHELELVVALAAGGSGLTPEQAAGCIYGYAVGLDMTRRDLQAAAKAARRPWDAGKAFDHSAPISPIRPLAEVLAAG
EIVLDVNGVRRQAGDLADMIWNVPETLAFLSRYFELRAGDLVFTGTPEGVGAVAAGDRLHGRIARVGELRLEIVAPQHA

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=212, Percent_Identity=34.9056603773585, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI215422413, Length=197, Percent_Identity=37.0558375634518, Blast_Score=127, Evalue=9e-30,
Organism=Homo sapiens, GI66348062, Length=197, Percent_Identity=37.0558375634518, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI156231349, Length=215, Percent_Identity=26.046511627907, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI40786394, Length=235, Percent_Identity=25.1063829787234, Blast_Score=82, Evalue=3e-16,
Organism=Escherichia coli, GI1787428, Length=197, Percent_Identity=40.6091370558376, Blast_Score=149, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17557057, Length=193, Percent_Identity=35.2331606217617, Blast_Score=121, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6324161, Length=230, Percent_Identity=30, Blast_Score=114, Evalue=1e-26,
Organism=Drosophila melanogaster, GI28571789, Length=211, Percent_Identity=32.2274881516588, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI28572127, Length=217, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 25502; Mature: 25371

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKHEAFHVIPPAPQPVVPVLGGGVFPVRRIFCVARNYAAHAREMGGDPAREAPFFFTK
CCCCCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
PADAVLPVGEGECGRMSYPVATSDLHHELELVVALAAGGSGLTPEQAAGCIYGYAVGLDM
CCCCEEECCCCCCCCEECCCCCHHHHHHEEEEEEEECCCCCCCHHHHCCCHHHHHHCCHH
TRRDLQAAAKAARRPWDAGKAFDHSAPISPIRPLAEVLAAGEIVLDVNGVRRQAGDLADM
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
IWNVPETLAFLSRYFELRAGDLVFTGTPEGVGAVAAGDRLHGRIARVGELRLEIVAPQHA
HHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCHHHHHHHHHCEEEEEEECCCCC
>Mature Secondary Structure 
SEKHEAFHVIPPAPQPVVPVLGGGVFPVRRIFCVARNYAAHAREMGGDPAREAPFFFTK
CCCCCEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
PADAVLPVGEGECGRMSYPVATSDLHHELELVVALAAGGSGLTPEQAAGCIYGYAVGLDM
CCCCEEECCCCCCCCEECCCCCHHHHHHEEEEEEEECCCCCCCHHHHCCCHHHHHHCCHH
TRRDLQAAAKAARRPWDAGKAFDHSAPISPIRPLAEVLAAGEIVLDVNGVRRQAGDLADM
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
IWNVPETLAFLSRYFELRAGDLVFTGTPEGVGAVAAGDRLHGRIARVGELRLEIVAPQHA
HHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCHHHHHHHHHCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10806384 [H]