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The map label for this gene is tonB1 [H]

Identifier: 119896906

GI number: 119896906

Start: 644177

End: 644926

Strand: Reverse

Name: tonB1 [H]

Synonym: azo0615

Alternate gene names: 119896906

Gene position: 644926-644177 (Counterclockwise)

Preceding gene: 119896907

Following gene: 119896905

Centisome position: 14.74

GC content: 75.2

Gene sequence:

>750_bases
ATGACCGTACCGTCCCCCGCGACACCCACCGTCCGCCCGGTCGCACGCCCCGTCGCTGTGGCGGTCGCGCCCCGGCAGCG
TCGGCCGCGCGCGCCGGAACGGCTGGGGCTGGGGGTGCTGGTGGTGGCCGCCCACGCCGCCGGTCTGCTCGCGCTCGCCT
ACGTGCGCAGCCCCGAGCCGCCCCCCGAGATCCGGCCGATCGAGATTGCCTTCATCCCGCTCGAAGCGCCGCCGCAGCCC
GAGCCGGTCAAGCCCGAACCCGTGAAGCAGGCCCCGCAGCCCAAGAAACCCGCCGAGGTGCGCCCCAAGCCGCCCAAGCC
CACGCCGCAACCGGTTGCGGAAAAGACCACCGCGTCGCCCAACGCGCTGAGCGCCGAGCCCGCCCCGCCGGCACCCGCCC
AGCCGGCCGCGCCTGCCGTCGCCACTCCCGCGCCGCCGGCCCCGCCCGCCCCGCCGCCGGTGGTGGCCGCCCGCTTCGAC
GCCGACTACCTCAACAACCCCAAGCCCGCCTACCCGCCGCTATCCACCCGGCTGCGCGAGGAAGGTACCGTGATGCTGCG
CGTGCAGGTCACCGCCGAAGGCCTGCCGGGCCAGATCGAGATCAACCGCAGTTCGGGCTTCGAGCGCCTCGACAGCGCCG
CGCGCGCCGCCGTGGCCCGCTGGCGTTTCGTGCCGGCCCGCCAGGGCGACCGCGCGATCGAGGCCTGGGTGCTCGTCCCC
CTCGTTTTCAAACTGACTGAAGGAAGGTAA

Upstream 100 bases:

>100_bases
GGCCCTGCAACGGCGACCGTCCATCCTTCGCGTCCGCCGCATCCCCGCTTCGACGTATCGCCGGAATCCCCGCATGAACG
CCGCAACCCAGGTTCTTTCC

Downstream 100 bases:

>100_bases
ACATGGAAGGAACCCAAGCCTTCGGATTCGCCCATCTGTGGGGACAGTCCGACGCCATCATCCGTACGGTGGCCATCCTG
CTGCTGGCGATGTCGGTCAC

Product: putative TonB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTVPSPATPTVRPVARPVAVAVAPRQRRPRAPERLGLGVLVVAAHAAGLLALAYVRSPEPPPEIRPIEIAFIPLEAPPQP
EPVKPEPVKQAPQPKKPAEVRPKPPKPTPQPVAEKTTASPNALSAEPAPPAPAQPAAPAVATPAPPAPPAPPPVVAARFD
ADYLNNPKPAYPPLSTRLREEGTVMLRVQVTAEGLPGQIEINRSSGFERLDSAARAAVARWRFVPARQGDRAIEAWVLVP
LVFKLTEGR

Sequences:

>Translated_249_residues
MTVPSPATPTVRPVARPVAVAVAPRQRRPRAPERLGLGVLVVAAHAAGLLALAYVRSPEPPPEIRPIEIAFIPLEAPPQP
EPVKPEPVKQAPQPKKPAEVRPKPPKPTPQPVAEKTTASPNALSAEPAPPAPAQPAAPAVATPAPPAPPAPPPVVAARFD
ADYLNNPKPAYPPLSTRLREEGTVMLRVQVTAEGLPGQIEINRSSGFERLDSAARAAVARWRFVPARQGDRAIEAWVLVP
LVFKLTEGR
>Mature_248_residues
TVPSPATPTVRPVARPVAVAVAPRQRRPRAPERLGLGVLVVAAHAAGLLALAYVRSPEPPPEIRPIEIAFIPLEAPPQPE
PVKPEPVKQAPQPKKPAEVRPKPPKPTPQPVAEKTTASPNALSAEPAPPAPAQPAAPAVATPAPPAPPAPPPVVAARFDA
DYLNNPKPAYPPLSTRLREEGTVMLRVQVTAEGLPGQIEINRSSGFERLDSAARAAVARWRFVPARQGDRAIEAWVLVPL
VFKLTEGR

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 26396; Mature: 26265

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPSPATPTVRPVARPVAVAVAPRQRRPRAPERLGLGVLVVAAHAAGLLALAYVRSPEP
CCCCCCCCCCCCHHCCCEEEEECCHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
PPEIRPIEIAFIPLEAPPQPEPVKPEPVKQAPQPKKPAEVRPKPPKPTPQPVAEKTTASP
CCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
NALSAEPAPPAPAQPAAPAVATPAPPAPPAPPPVVAARFDADYLNNPKPAYPPLSTRLRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCCCCCCHHHHHCC
EGTVMLRVQVTAEGLPGQIEINRSSGFERLDSAARAAVARWRFVPARQGDRAIEAWVLVP
CCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LVFKLTEGR
HHHHHCCCC
>Mature Secondary Structure 
TVPSPATPTVRPVARPVAVAVAPRQRRPRAPERLGLGVLVVAAHAAGLLALAYVRSPEP
CCCCCCCCCCCHHCCCEEEEECCHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
PPEIRPIEIAFIPLEAPPQPEPVKPEPVKQAPQPKKPAEVRPKPPKPTPQPVAEKTTASP
CCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
NALSAEPAPPAPAQPAAPAVATPAPPAPPAPPPVVAARFDADYLNNPKPAYPPLSTRLRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCCCCCCHHHHHCC
EGTVMLRVQVTAEGLPGQIEINRSSGFERLDSAARAAVARWRFVPARQGDRAIEAWVLVP
CCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LVFKLTEGR
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]