Click here to switch to the map view.

The map label for this gene is yoaH [H]

Identifier: 119896871

GI number: 119896871

Start: 610477

End: 612138

Strand: Direct

Name: yoaH [H]

Synonym: azo0580

Alternate gene names: 119896871

Gene position: 610477-612138 (Clockwise)

Preceding gene: 119896870

Following gene: 119896874

Centisome position: 13.95

GC content: 72.62

Gene sequence:

>1662_bases
ATGCGGATACGAAGCAAGCTGCTGGCGCTGGTCGCCTGCGGCGTCATCGGGCTGATGGTGTCGGGCGCGGTGAGCGTGGT
GGGCATGCGCTCCGTGGGCAGCGGCCTGCAGCACATCGACCGTAACAGCCTGCCTGCCATCCTGCAGCTGGAAACCATCA
ACGAGGCGCTGGCGTCGATTGCGCGCCGCACGCTGCAGGCGGCGATCTGGCGTGATGAATCGGGGGCCTACGGCCAACAG
GAGCTGGGCGAGGTCCTTGCGCTCAAGCAGGCGGCGTGGGCGCGGCTGGATGCCGCCTTTGCGGCCTATGGCGCGCTGCC
ACGCGACGCCGCGGTGGAGCCGTTGTGGAAGGCTTTCGACGACAGTTTCACGCTCTGGCGCCGGCTCGATGCGCCGATGA
CCGAACTGCTCGAAGCGATGGTGCGGGGCATGACGCCCGAGGCGCAGCGCGAGGCCTTCGCCAGCTACTACGAATTCCAC
TACGACCAGTACCGCGCGCTGGAGGCGGCCCAGGCCAGCCTGCAGGCCCTGGTGGATGCGACCGCGGCGCAGGTGCGCGA
GGACGCCGCGCTCGCGGTGGCGCGTTCGGAGCGTTCGCTGTCGCTGCAGACCGCGGTCAGCGTCGCGGCGATCCTGGCGC
TGTGCTGGATGGCCTTTTCGGTGCTGCGCTCGGTGTTGCGGCCGATCGAGGCGCTGCGTACCACGGTGCGCGAGATCGCC
ACCCGGAGCGACTTCACGCTGCGCGCGCCGGGTGAGGGCAAGGACGAAGTGGGCGAGACCGTGGCGGCTTTCAACGGCCT
GGTCGAACGCACCCGCGCCGCGCTGGTGGACGTGCGCGAGCGCGCGGCGCAGATGCACGAAGCGGTGGCGGAGGTGTCGC
GCGCAGCGCTGGGCGTGGCCGCCCGCGCCGAGCGCCAGAACGTATCGACCAGCGCGATGGCGGCGTCGCTGGAAGGGCTG
ACCGCGAGCATCAGCCAGGTGTCGGGCCACGCCGCGGCGGCGCGCGAGTTGTCGGTGGCCGCGGGGGAACGTGCGGGGGC
GGGCGGCCGGGTGCTGGGCGACACGCTCGGCGCGATGGAATGCATTGCCGACCGTGTTGGCGATGCCGGCCAGCTGATCG
ACCGCCTGGTCGGCGGGCTGCGCGAGGTGACGCAGGTGGTGGCGGTGATCCGCGAGGTGGCCGAGCAGACCAACCTGCTC
GCGCTCAATGCCGCGATCGAGGCGGCGCGCGCCGGGGAGCAGGGGCGCGGCTTCGCGGTCGTTGCCGACGAGGTGCGGCG
GCTGGCCGAGCGCACCGGGGACGCCACCGGCAACATCGCCGCGATCATGGCCCGCATCGAGCAGGCGGCCGCGATGTCCA
CGCAGGGCATGGCAGCGGCAGTGGAGGAGGCACGCCAGGGCGAGGCGCTTGCCGGCGAGGCCGGCGGCCATGTGCAGGCG
ATCCAGCAGGGCGCCGGGCGCGCGGCGGCCGCGGTGACCGACATCAGCCAGGCGTTGCAGGCGCAGAGCAGCGCCGGGCA
GGACATTGTCCGTCACGTGGACGAGATCGCGCGCATGAGCGAGGAAAGCCGCCTCGCCTCTGCCGAGGCGGCCGACGCCG
CGCGCCGGCTGGACGAACTGGCGGCGACGGTCGGTGCCACCGTCGGCCGCTTCCGCACCTGA

Upstream 100 bases:

>100_bases
CGGCGCTGATGCGCGCGCCGCTCGTCGGCGCGATTGTTACACGTCACGAAGCTGTCACCTGCCGCTGCAATGCTTCGCGC
CCTTTCTGATGGGAGCGGGC

Downstream 100 bases:

>100_bases
GCAGCGGTCAGCGGCCGCCCTCGGTTGCCGGTCGAGCGGCGGCGAGGGAGCGCGCCTCCAGGCGGTGGGCCCCGATGCTG
AACGCCAGCGCCAGGATGGC

Product: putative methyl-accepting chemotaxis transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MRIRSKLLALVACGVIGLMVSGAVSVVGMRSVGSGLQHIDRNSLPAILQLETINEALASIARRTLQAAIWRDESGAYGQQ
ELGEVLALKQAAWARLDAAFAAYGALPRDAAVEPLWKAFDDSFTLWRRLDAPMTELLEAMVRGMTPEAQREAFASYYEFH
YDQYRALEAAQASLQALVDATAAQVREDAALAVARSERSLSLQTAVSVAAILALCWMAFSVLRSVLRPIEALRTTVREIA
TRSDFTLRAPGEGKDEVGETVAAFNGLVERTRAALVDVRERAAQMHEAVAEVSRAALGVAARAERQNVSTSAMAASLEGL
TASISQVSGHAAAARELSVAAGERAGAGGRVLGDTLGAMECIADRVGDAGQLIDRLVGGLREVTQVVAVIREVAEQTNLL
ALNAAIEAARAGEQGRGFAVVADEVRRLAERTGDATGNIAAIMARIEQAAAMSTQGMAAAVEEARQGEALAGEAGGHVQA
IQQGAGRAAAAVTDISQALQAQSSAGQDIVRHVDEIARMSEESRLASAEAADAARRLDELAATVGATVGRFRT

Sequences:

>Translated_553_residues
MRIRSKLLALVACGVIGLMVSGAVSVVGMRSVGSGLQHIDRNSLPAILQLETINEALASIARRTLQAAIWRDESGAYGQQ
ELGEVLALKQAAWARLDAAFAAYGALPRDAAVEPLWKAFDDSFTLWRRLDAPMTELLEAMVRGMTPEAQREAFASYYEFH
YDQYRALEAAQASLQALVDATAAQVREDAALAVARSERSLSLQTAVSVAAILALCWMAFSVLRSVLRPIEALRTTVREIA
TRSDFTLRAPGEGKDEVGETVAAFNGLVERTRAALVDVRERAAQMHEAVAEVSRAALGVAARAERQNVSTSAMAASLEGL
TASISQVSGHAAAARELSVAAGERAGAGGRVLGDTLGAMECIADRVGDAGQLIDRLVGGLREVTQVVAVIREVAEQTNLL
ALNAAIEAARAGEQGRGFAVVADEVRRLAERTGDATGNIAAIMARIEQAAAMSTQGMAAAVEEARQGEALAGEAGGHVQA
IQQGAGRAAAAVTDISQALQAQSSAGQDIVRHVDEIARMSEESRLASAEAADAARRLDELAATVGATVGRFRT
>Mature_553_residues
MRIRSKLLALVACGVIGLMVSGAVSVVGMRSVGSGLQHIDRNSLPAILQLETINEALASIARRTLQAAIWRDESGAYGQQ
ELGEVLALKQAAWARLDAAFAAYGALPRDAAVEPLWKAFDDSFTLWRRLDAPMTELLEAMVRGMTPEAQREAFASYYEFH
YDQYRALEAAQASLQALVDATAAQVREDAALAVARSERSLSLQTAVSVAAILALCWMAFSVLRSVLRPIEALRTTVREIA
TRSDFTLRAPGEGKDEVGETVAAFNGLVERTRAALVDVRERAAQMHEAVAEVSRAALGVAARAERQNVSTSAMAASLEGL
TASISQVSGHAAAARELSVAAGERAGAGGRVLGDTLGAMECIADRVGDAGQLIDRLVGGLREVTQVVAVIREVAEQTNLL
ALNAAIEAARAGEQGRGFAVVADEVRRLAERTGDATGNIAAIMARIEQAAAMSTQGMAAAVEEARQGEALAGEAGGHVQA
IQQGAGRAAAAVTDISQALQAQSSAGQDIVRHVDEIARMSEESRLASAEAADAARRLDELAATVGATVGRFRT

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=433, Percent_Identity=28.4064665127021, Blast_Score=121, Evalue=2e-28,
Organism=Escherichia coli, GI1788194, Length=536, Percent_Identity=26.4925373134328, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI2367378, Length=370, Percent_Identity=30, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1788195, Length=305, Percent_Identity=29.5081967213115, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1789453, Length=322, Percent_Identity=27.639751552795, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007891
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF05227 CHASE3; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58116; Mature: 58116

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRSKLLALVACGVIGLMVSGAVSVVGMRSVGSGLQHIDRNSLPAILQLETINEALASI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ARRTLQAAIWRDESGAYGQQELGEVLALKQAAWARLDAAFAAYGALPRDAAVEPLWKAFD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
DSFTLWRRLDAPMTELLEAMVRGMTPEAQREAFASYYEFHYDQYRALEAAQASLQALVDA
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAQVREDAALAVARSERSLSLQTAVSVAAILALCWMAFSVLRSVLRPIEALRTTVREIA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRSDFTLRAPGEGKDEVGETVAAFNGLVERTRAALVDVRERAAQMHEAVAEVSRAALGVA
CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARAERQNVSTSAMAASLEGLTASISQVSGHAAAARELSVAAGERAGAGGRVLGDTLGAME
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
CIADRVGDAGQLIDRLVGGLREVTQVVAVIREVAEQTNLLALNAAIEAARAGEQGRGFAV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHCCCCCCCEEH
VADEVRRLAERTGDATGNIAAIMARIEQAAAMSTQGMAAAVEEARQGEALAGEAGGHVQA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
IQQGAGRAAAAVTDISQALQAQSSAGQDIVRHVDEIARMSEESRLASAEAADAARRLDEL
HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATVGATVGRFRT
HHHHHHHHHCCCC
>Mature Secondary Structure
MRIRSKLLALVACGVIGLMVSGAVSVVGMRSVGSGLQHIDRNSLPAILQLETINEALASI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ARRTLQAAIWRDESGAYGQQELGEVLALKQAAWARLDAAFAAYGALPRDAAVEPLWKAFD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
DSFTLWRRLDAPMTELLEAMVRGMTPEAQREAFASYYEFHYDQYRALEAAQASLQALVDA
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAQVREDAALAVARSERSLSLQTAVSVAAILALCWMAFSVLRSVLRPIEALRTTVREIA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRSDFTLRAPGEGKDEVGETVAAFNGLVERTRAALVDVRERAAQMHEAVAEVSRAALGVA
CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARAERQNVSTSAMAASLEGLTASISQVSGHAAAARELSVAAGERAGAGGRVLGDTLGAME
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
CIADRVGDAGQLIDRLVGGLREVTQVVAVIREVAEQTNLLALNAAIEAARAGEQGRGFAV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHCCCCCCCEEH
VADEVRRLAERTGDATGNIAAIMARIEQAAAMSTQGMAAAVEEARQGEALAGEAGGHVQA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
IQQGAGRAAAAVTDISQALQAQSSAGQDIVRHVDEIARMSEESRLASAEAADAARRLDEL
HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATVGATVGRFRT
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]