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The map label for this gene is nifM [H]

Identifier: 119896837

GI number: 119896837

Start: 578928

End: 579785

Strand: Reverse

Name: nifM [H]

Synonym: azo0546

Alternate gene names: 119896837

Gene position: 579785-578928 (Counterclockwise)

Preceding gene: 119896838

Following gene: 119896828

Centisome position: 13.25

GC content: 69.11

Gene sequence:

>858_bases
ATGAGCGCGCAGGTGTATTACGAACTCAAGGCCGCGCTGGCGCTGTTCAGCAAGAGCCCGGGCGCGCTCGACGACGCCGA
GAACGCGCGCGTGAAGGCGGTGGCGCGGCGCTACACCGAGATCGAATCGGTGGTGCTGGCGAGCAGCGAAGCGCAGGGCG
TGTGCCTCGCCGAGGGCGCGGTGGACAAGGCCGTGGGCGAAATCCGCGGCCGCTACGAGGACGAAGGCGCCTTCGCGCTC
GAGCTGGAGGCGGCGGGGCTGGACCTGCCCGGCCTCACCGCGGCACTGCAGCGCGACCTGCTGGTGGAAGCAGTGATGGA
GCGCGTCGGCGCCCGCGCCGGGTCGGTCGATGAAACCGAGGCGGAGATCTTCTACTACGCCCATGTCGACCGCTTCCGCG
CGCCGGAACGCCGCACCGTGCGCCACATCCTGGTGACGATCAACGACGCCTATCCGGATAACCGCCGCGAGGTCGCCAGC
CGCCGCATCCACGAAATCTGCAAGCGCCTCAACAACAAGCCGGAGCGTTTCGAGGAACAGGCGATGAAGCACTCCGAGTG
CCCCACCGCGCTCAACGGCGGCCTGCTCGGCGAACTGCCGCGCGGCACGCTGTATCCGGAACTCGACGCGGTGCTGTTCG
AGATGAAGGCGGGCCAGTTGTCCGGCGTCGTCGAGTCGGAGATCGGCTTTCACCTGCTGCGCTGCGACGCGATCCAGCCC
GAACGGGTGCTGAGCTTCGCCGAGGTGTCGGAATCGCTGCGCCAGCAGCTCACCGCCGAGCGCGGCCGCAAGGACGCGCG
CCGCTGGCTGACCGAACTGCTCAAGCGCACCACGGCGGAGGCGGTGGCGACCAACTGA

Upstream 100 bases:

>100_bases
CGACCAAGTTCCTCTGTATCCCGGAGGCCTCGCTCGAAGCACTGCCGCCGGGCACTGCAGTGCCGGAAACGGTGGCGGCC
CCGACCGAGGCGGAAGAATC

Downstream 100 bases:

>100_bases
AGTCCGCCCCCGCAAACGACAAGGGAGGCCTCCGCAAGGAGCGCCTCCCTTTGTGCTTTCCGGCGCGCCGCGCCGGGTTC
CGCCGTCAGTGGCGGAAACG

Product: peptidylprolyl isomerase

Products: peptidylproline (omega=0) [C]

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSAQVYYELKAALALFSKSPGALDDAENARVKAVARRYTEIESVVLASSEAQGVCLAEGAVDKAVGEIRGRYEDEGAFAL
ELEAAGLDLPGLTAALQRDLLVEAVMERVGARAGSVDETEAEIFYYAHVDRFRAPERRTVRHILVTINDAYPDNRREVAS
RRIHEICKRLNNKPERFEEQAMKHSECPTALNGGLLGELPRGTLYPELDAVLFEMKAGQLSGVVESEIGFHLLRCDAIQP
ERVLSFAEVSESLRQQLTAERGRKDARRWLTELLKRTTAEAVATN

Sequences:

>Translated_285_residues
MSAQVYYELKAALALFSKSPGALDDAENARVKAVARRYTEIESVVLASSEAQGVCLAEGAVDKAVGEIRGRYEDEGAFAL
ELEAAGLDLPGLTAALQRDLLVEAVMERVGARAGSVDETEAEIFYYAHVDRFRAPERRTVRHILVTINDAYPDNRREVAS
RRIHEICKRLNNKPERFEEQAMKHSECPTALNGGLLGELPRGTLYPELDAVLFEMKAGQLSGVVESEIGFHLLRCDAIQP
ERVLSFAEVSESLRQQLTAERGRKDARRWLTELLKRTTAEAVATN
>Mature_284_residues
SAQVYYELKAALALFSKSPGALDDAENARVKAVARRYTEIESVVLASSEAQGVCLAEGAVDKAVGEIRGRYEDEGAFALE
LEAAGLDLPGLTAALQRDLLVEAVMERVGARAGSVDETEAEIFYYAHVDRFRAPERRTVRHILVTINDAYPDNRREVASR
RIHEICKRLNNKPERFEEQAMKHSECPTALNGGLLGELPRGTLYPELDAVLFEMKAGQLSGVVESEIGFHLLRCDAIQPE
RVLSFAEVSESLRQQLTAERGRKDARRWLTELLKRTTAEAVATN

Specific function: Required for the activation and stabilization of the iron-component (nifH) of nitrogenase. Probable PPIase [H]

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Type II Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PpiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014282
- InterPro:   IPR000297
- InterPro:   IPR023058
- InterPro:   IPR008880 [H]

Pfam domain/function: PF00639 Rotamase [H]

EC number: 5.2.1.8 [C]

Molecular weight: Translated: 31601; Mature: 31470

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQVYYELKAALALFSKSPGALDDAENARVKAVARRYTEIESVVLASSEAQGVCLAEGA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCH
VDKAVGEIRGRYEDEGAFALELEAAGLDLPGLTAALQRDLLVEAVMERVGARAGSVDETE
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
AEIFYYAHVDRFRAPERRTVRHILVTINDAYPDNRREVASRRIHEICKRLNNKPERFEEQ
HHEEEEEEHHHHCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
AMKHSECPTALNGGLLGELPRGTLYPELDAVLFEMKAGQLSGVVESEIGFHLLRCDAIQP
HHHHCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCEEEEEECCCCH
ERVLSFAEVSESLRQQLTAERGRKDARRWLTELLKRTTAEAVATN
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAQVYYELKAALALFSKSPGALDDAENARVKAVARRYTEIESVVLASSEAQGVCLAEGA
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCH
VDKAVGEIRGRYEDEGAFALELEAAGLDLPGLTAALQRDLLVEAVMERVGARAGSVDETE
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
AEIFYYAHVDRFRAPERRTVRHILVTINDAYPDNRREVASRRIHEICKRLNNKPERFEEQ
HHEEEEEEHHHHCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
AMKHSECPTALNGGLLGELPRGTLYPELDAVLFEMKAGQLSGVVESEIGFHLLRCDAIQP
HHHHCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCEEEEEECCCCH
ERVLSFAEVSESLRQQLTAERGRKDARRWLTELLKRTTAEAVATN
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Peptidoproline (omega=180) [C]

Specific reaction: Peptidoproline (omega=180) = peptidylproline (omega=0) [C]

General reaction: Rotation (Single bond) [C]

Inhibitor: cyclosporins [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885524 [H]