Click here to switch to the map view.

The map label for this gene is yfhL [C]

Identifier: 119896815

GI number: 119896815

Start: 560794

End: 561084

Strand: Direct

Name: yfhL [C]

Synonym: azo0524

Alternate gene names: 119896815

Gene position: 560794-561084 (Clockwise)

Preceding gene: 119896814

Following gene: 119896816

Centisome position: 12.82

GC content: 63.23

Gene sequence:

>291_bases
ATGGCACTGGAAATCACCGAAGTCTGCGTGGGCTGTTATGCCTGTGAGCCGCTGTGCCCGAACAAGGCCATCAGCGCCGG
CAACCCGGTCTTCACCATCGACCCCGACAAGTGCACCGAATGCCTGGGCGACTACGACAAGCCCCAGTGCGCCGAGATCT
GTCCGATCGAGGCGGCCATCGTCGATGAGATCGGCGATCCGCTGAACCCGCTCGGCTCGCTGACCGGCATCCCGATCCAC
CTGATCGAGGAATACAACACGACCGGCACTGTCGCCCGTCCCGGCGTGTAA

Upstream 100 bases:

>100_bases
GCGCTGGGGCGCGGGCTCCCGTTTTCCGCCCCTTGAAGGTTCCGCATCACCGTTCCGCACCCAATTTCCGCCTGCACCCA
ACGAACGCGAGAGGCACGAC

Downstream 100 bases:

>100_bases
GCCACACAGAACCACCGATCGACGCGGGCGCCGCGAGGGGCCCGCTGCAACACCGCGGTGCGTTGCGCGCGCACTGCCTA
CCGCAAGGAGCATGTCGTGA

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MALEITEVCVGCYACEPLCPNKAISAGNPVFTIDPDKCTECLGDYDKPQCAEICPIEAAIVDEIGDPLNPLGSLTGIPIH
LIEEYNTTGTVARPGV

Sequences:

>Translated_96_residues
MALEITEVCVGCYACEPLCPNKAISAGNPVFTIDPDKCTECLGDYDKPQCAEICPIEAAIVDEIGDPLNPLGSLTGIPIH
LIEEYNTTGTVARPGV
>Mature_95_residues
ALEITEVCVGCYACEPLCPNKAISAGNPVFTIDPDKCTECLGDYDKPQCAEICPIEAAIVDEIGDPLNPLGSLTGIPIHL
IEEYNTTGTVARPGV

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=63, Percent_Identity=52.3809523809524, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 10123; Mature: 9991

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
8.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALEITEVCVGCYACEPLCPNKAISAGNPVFTIDPDKCTECLGDYDKPQCAEICPIEAAI
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCHHHH
VDEIGDPLNPLGSLTGIPIHLIEEYNTTGTVARPGV
HHHCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCC
>Mature Secondary Structure 
ALEITEVCVGCYACEPLCPNKAISAGNPVFTIDPDKCTECLGDYDKPQCAEICPIEAAI
CCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCHHHH
VDEIGDPLNPLGSLTGIPIHLIEEYNTTGTVARPGV
HHHCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2450865 [H]