| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
Click here to switch to the map view.
The map label for this gene is 119896778
Identifier: 119896778
GI number: 119896778
Start: 525247
End: 526419
Strand: Direct
Name: 119896778
Synonym: azo0487
Alternate gene names: NA
Gene position: 525247-526419 (Clockwise)
Preceding gene: 119896774
Following gene: 119896780
Centisome position: 12.0
GC content: 71.44
Gene sequence:
>1173_bases ATGTCCTCCCTGCCCGAACCCAGCGCCGACGCGCTGGACCAGAGCGCCCGCCTGGTGGCGCTGCTCCACGCCGAGATCGC CGCCGCCGGCGGCTGGCTGTCGTTCGCGCGCTACATGGAGATCACGCTCTACGCGCCCGGCCTTGGCTACTACAGCGGCG GGGCGCGCAAGTTCGGGCCGGGCGGCGACTTCATCACCGCGCCCGAACTCACGCCCTTGTTCGGCCAGGCGCTCGCCAGC CAGGTGGAGCAGGTGATGCGCGCGAGCGCGCCGGCGGTGATCGAGGTCGGCGCCGGCACCGGCCTGCTCGCGACCGACCT GCTGCTCGAACTGGAGCGCCGCGGCTGTTTGCCCGACAGCTACGGCATCCTCGAACTGTCGGGCGAACTGCGCGAGCGCC AGTTCGATACGCTTGCCAGTCAGGCGCCGCACCTTGCGGGGCGCGTGCGCTGGCTGGAAAGCCTACCCGAGTCCTTCAGC GGCGCGGTGGTCGCCAACGAAGTGCTGGATGTGATGCCGGTGCATCTGGTGGTGGCGCGCGCCGAGGGCCTGTTCGAGCG CGGCGTCGCGGTGGTGCAGCGGGAGGACGGGCCTGCGCTGCAATGGGCCGACGTTCCGGCCGCCGGGGCAGTGCGCGAGG CGGCACTTGCGCTGCAGCTGCCGACGCCGTCGTCGGGTGAATACGTCACCGAGATCAACCTGGCCGGCGGTGCGTGGGTG GCTGCCTGGGCGGAACGCCTGCGCCAGGGCGCGATGCTGCTGATCGACTACGGCTATCCGCGCGCCGAGTATTACCTGCC GTCACGCTCCGGCGGCACGCTGCTGTGCTACTACCGGCACCACGCGCACGGCGACCCCTTCCTGTGGCCCGGGCTCAACG ACATCACGGCGTTTGTCGATTTCACCGCGGTGGCCGAAGCGGCGTTCGGCGCCGGACTGGACGTGACCGGCTACACCACG CAGGCGCAGTTCCTGTTCAACTGCGGCGTGCTGGAGTGCCTCGCGCGCCGAGGGCCGGAAGAGCGCCCGGAGTACATCCG CGCGGCACGCGCGGTGCAGCGCCTGACTGCGCCGCAGGAAATGGGCGAGCTCTTCAAGGTGCTGGCGGTGTCGCGCGGGC TGTCCGAACCGCTGCTCGGCTTCGCCCGCGGCGACCGCCTGCACGCGCTGTGA
Upstream 100 bases:
>100_bases TGTCGGGCCTCGCGGCGTCGCTGCAAACCCCGTTGCCGAATCGGCGGCGGCGCGGGCGCGGGCGATACAATGCCGCCTTC TTCGAAATCCGGCCCGTCCT
Downstream 100 bases:
>100_bases GGCAGTCGGGGCGGGCTTCGACCCGCCCCCGCGCCGGCCTTATTCCTGGTTGCGGTAGATTGCGGCGAGGAAGGCCTCGA TGTCCGCCGGCGGCGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSSLPEPSADALDQSARLVALLHAEIAAAGGWLSFARYMEITLYAPGLGYYSGGARKFGPGGDFITAPELTPLFGQALAS QVEQVMRASAPAVIEVGAGTGLLATDLLLELERRGCLPDSYGILELSGELRERQFDTLASQAPHLAGRVRWLESLPESFS GAVVANEVLDVMPVHLVVARAEGLFERGVAVVQREDGPALQWADVPAAGAVREAALALQLPTPSSGEYVTEINLAGGAWV AAWAERLRQGAMLLIDYGYPRAEYYLPSRSGGTLLCYYRHHAHGDPFLWPGLNDITAFVDFTAVAEAAFGAGLDVTGYTT QAQFLFNCGVLECLARRGPEERPEYIRAARAVQRLTAPQEMGELFKVLAVSRGLSEPLLGFARGDRLHAL
Sequences:
>Translated_390_residues MSSLPEPSADALDQSARLVALLHAEIAAAGGWLSFARYMEITLYAPGLGYYSGGARKFGPGGDFITAPELTPLFGQALAS QVEQVMRASAPAVIEVGAGTGLLATDLLLELERRGCLPDSYGILELSGELRERQFDTLASQAPHLAGRVRWLESLPESFS GAVVANEVLDVMPVHLVVARAEGLFERGVAVVQREDGPALQWADVPAAGAVREAALALQLPTPSSGEYVTEINLAGGAWV AAWAERLRQGAMLLIDYGYPRAEYYLPSRSGGTLLCYYRHHAHGDPFLWPGLNDITAFVDFTAVAEAAFGAGLDVTGYTT QAQFLFNCGVLECLARRGPEERPEYIRAARAVQRLTAPQEMGELFKVLAVSRGLSEPLLGFARGDRLHAL >Mature_389_residues SSLPEPSADALDQSARLVALLHAEIAAAGGWLSFARYMEITLYAPGLGYYSGGARKFGPGGDFITAPELTPLFGQALASQ VEQVMRASAPAVIEVGAGTGLLATDLLLELERRGCLPDSYGILELSGELRERQFDTLASQAPHLAGRVRWLESLPESFSG AVVANEVLDVMPVHLVVARAEGLFERGVAVVQREDGPALQWADVPAAGAVREAALALQLPTPSSGEYVTEINLAGGAWVA AWAERLRQGAMLLIDYGYPRAEYYLPSRSGGTLLCYYRHHAHGDPFLWPGLNDITAFVDFTAVAEAAFGAGLDVTGYTTQ AQFLFNCGVLECLARRGPEERPEYIRAARAVQRLTAPQEMGELFKVLAVSRGLSEPLLGFARGDRLHAL
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=376, Percent_Identity=27.1276595744681, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193211224, Length=366, Percent_Identity=24.0437158469945, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24645885, Length=421, Percent_Identity=28.978622327791, Blast_Score=98, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41856; Mature: 41725
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPEPSADALDQSARLVALLHAEIAAAGGWLSFARYMEITLYAPGLGYYSGGARKFGP CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCCCCCCCCCCCC GGDFITAPELTPLFGQALASQVEQVMRASAPAVIEVGAGTGLLATDLLLELERRGCLPDS CCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCC YGILELSGELRERQFDTLASQAPHLAGRVRWLESLPESFSGAVVANEVLDVMPVHLVVAR CCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHH AEGLFERGVAVVQREDGPALQWADVPAAGAVREAALALQLPTPSSGEYVTEINLAGGAWV HHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHEEEECCCCCCCCEEEEEECCCCHHH AAWAERLRQGAMLLIDYGYPRAEYYLPSRSGGTLLCYYRHHAHGDPFLWPGLNDITAFVD HHHHHHHHCCCEEEEECCCCCCEEECCCCCCCEEEEEEEECCCCCCEECCCHHHHHHHHH FTAVAEAAFGAGLDVTGYTTQAQFLFNCGVLECLARRGPEERPEYIRAARAVQRLTAPQE HHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHH MGELFKVLAVSRGLSEPLLGFARGDRLHAL HHHHHHHHHHHCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure SSLPEPSADALDQSARLVALLHAEIAAAGGWLSFARYMEITLYAPGLGYYSGGARKFGP CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEECCCCCCCCCCCCCCC GGDFITAPELTPLFGQALASQVEQVMRASAPAVIEVGAGTGLLATDLLLELERRGCLPDS CCCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCC YGILELSGELRERQFDTLASQAPHLAGRVRWLESLPESFSGAVVANEVLDVMPVHLVVAR CCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHH AEGLFERGVAVVQREDGPALQWADVPAAGAVREAALALQLPTPSSGEYVTEINLAGGAWV HHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHEEEECCCCCCCCEEEEEECCCCHHH AAWAERLRQGAMLLIDYGYPRAEYYLPSRSGGTLLCYYRHHAHGDPFLWPGLNDITAFVD HHHHHHHHCCCEEEEECCCCCCEEECCCCCCCEEEEEEEECCCCCCEECCCHHHHHHHHH FTAVAEAAFGAGLDVTGYTTQAQFLFNCGVLECLARRGPEERPEYIRAARAVQRLTAPQE HHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHH MGELFKVLAVSRGLSEPLLGFARGDRLHAL HHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA