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The map label for this gene is yjiA [H]

Identifier: 119896746

GI number: 119896746

Start: 486445

End: 487725

Strand: Direct

Name: yjiA [H]

Synonym: azo0455

Alternate gene names: 119896746

Gene position: 486445-487725 (Clockwise)

Preceding gene: 119896741

Following gene: 119896747

Centisome position: 11.12

GC content: 70.88

Gene sequence:

>1281_bases
TTGAAGGGGAGGGGGCAAAGCGTCGGGCCTGGCAGCTTTCGCGTTTACTGGCAGGCCGCGAGCCGCGCCGGTTTGCCGCC
CTCTTCGCGCCCGGTTCGGACGGAAGGGAAAGGGCGATACCGCTCATGGACCGCGCGTCCGTATCATTCATTACTCACTT
CGCCTCACCACGCCGTCCCCATGACCCCCGACACCCCCGACCGCCGCATCCCCGTTACCGTCCTCACCGGCTTCCTCGGC
GCCGGCAAGACCACGCTGCTCAATCACCTGCTGCGCCAGCCGGGCATGGAGGGGTGTGCGGTGCTCATCAACGAGTTCGG
CGAGGTCGGGGTCGATCACCATCTCGTCGAGAAGGTCGACGAGACCCTGATCGTGCTCGATTCCGGCTGCATCTGCTGCA
GCGTGCAGGGCGATCTGGTGAAGGCGCTGAAGGGGCTCTTCATGCGCGCGCTGCGGCGCGAGATTCCCGCGCTGCGGCGG
GTGCTGATCGAGACCACCGGGCTGGCCGACCCGGCGCCGGTGATCTTCACGCTGATGGAAGAGCCCTTCATTGCCGAACG
CTACCGTTGCGACGGCGTCGTCACCGCGGTGGATGCGACCCATGCCGATGGCCAGCTCGACCGCCAGCGCGAGGCGGTGC
GTCAGGTGGCGATGGCCGACCGGCTGTTGATCACCAAGTGCGACCTGGCGGACGCGGCGGTGCGCGCCGGACTGTCGGTG
CGGCTGGCGCAGCTCAACCCGGCGGCGCAGCAGATCGAGGTGGTGCGCGGCGAGGTCGCGCCGGACGCGCTGTTCGGCTG
CGGCCTCTACGATGCCGCGGGCAAGATCCCGGACGTGGCGGCGTGGCTGGGCGAGGAGCGCGCCCGGGCGGCCGCGGCGC
GGGCCGCTGCCGCCGCCCCGGCGTGGCGCAAACCCGGCGCGGCGCCGCGCCACGGCGCTGCCGCGCGCCACGACGAAGGC
ATCGCCAGCCACGTGCTGGTGTTCGACGCGCCGCTCACCTGGTACGGCTTTTCCGATGCGCTCGGGGTGATCCTGCAGGC
CTATGGCGACCGCATCCTGCGGGTGAAGGGCCTGATGAACATCGCCGGCGACCCGCTGCCGCGGGTGGTGCAGTGCGTGC
AGCACGTTGCCTATCCGCCCGCCAGCCTGCCCGCCTGGCCCACCCGGCCGCCCTACGACGACCGCCGCAGCCGGCTCGTC
TTCATCGTGCGCGATCTGCCGCGCAGCGAACTGGAGCAGATCTTCTTCGGCGTGGCCGGCGTGCCGGTGATGCCGCAGTA
G

Upstream 100 bases:

>100_bases
CCCTGACCCCATCCCCACCCCGGCCCGGCAGCCGGTGCCGCAGGGCACCGTCGTTCGGTCAGCGGCAAGCAGCGCTTGCC
GAAACCCTGCCCTCACCCCC

Downstream 100 bases:

>100_bases
CGCCGGCGGTGGCGCAAGATTGATTTTCCTTAATGTTCCGCGAAGGGGCGCTTAATGCGCGGCCGCGCAGACTGGGTGCT
CGACGACAAGCCGGTCGTTG

Product: putative cobalmin snthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKGRGQSVGPGSFRVYWQAASRAGLPPSSRPVRTEGKGRYRSWTARPYHSLLTSPHHAVPMTPDTPDRRIPVTVLTGFLG
AGKTTLLNHLLRQPGMEGCAVLINEFGEVGVDHHLVEKVDETLIVLDSGCICCSVQGDLVKALKGLFMRALRREIPALRR
VLIETTGLADPAPVIFTLMEEPFIAERYRCDGVVTAVDATHADGQLDRQREAVRQVAMADRLLITKCDLADAAVRAGLSV
RLAQLNPAAQQIEVVRGEVAPDALFGCGLYDAAGKIPDVAAWLGEERARAAAARAAAAAPAWRKPGAAPRHGAAARHDEG
IASHVLVFDAPLTWYGFSDALGVILQAYGDRILRVKGLMNIAGDPLPRVVQCVQHVAYPPASLPAWPTRPPYDDRRSRLV
FIVRDLPRSELEQIFFGVAGVPVMPQ

Sequences:

>Translated_426_residues
MKGRGQSVGPGSFRVYWQAASRAGLPPSSRPVRTEGKGRYRSWTARPYHSLLTSPHHAVPMTPDTPDRRIPVTVLTGFLG
AGKTTLLNHLLRQPGMEGCAVLINEFGEVGVDHHLVEKVDETLIVLDSGCICCSVQGDLVKALKGLFMRALRREIPALRR
VLIETTGLADPAPVIFTLMEEPFIAERYRCDGVVTAVDATHADGQLDRQREAVRQVAMADRLLITKCDLADAAVRAGLSV
RLAQLNPAAQQIEVVRGEVAPDALFGCGLYDAAGKIPDVAAWLGEERARAAAARAAAAAPAWRKPGAAPRHGAAARHDEG
IASHVLVFDAPLTWYGFSDALGVILQAYGDRILRVKGLMNIAGDPLPRVVQCVQHVAYPPASLPAWPTRPPYDDRRSRLV
FIVRDLPRSELEQIFFGVAGVPVMPQ
>Mature_426_residues
MKGRGQSVGPGSFRVYWQAASRAGLPPSSRPVRTEGKGRYRSWTARPYHSLLTSPHHAVPMTPDTPDRRIPVTVLTGFLG
AGKTTLLNHLLRQPGMEGCAVLINEFGEVGVDHHLVEKVDETLIVLDSGCICCSVQGDLVKALKGLFMRALRREIPALRR
VLIETTGLADPAPVIFTLMEEPFIAERYRCDGVVTAVDATHADGQLDRQREAVRQVAMADRLLITKCDLADAAVRAGLSV
RLAQLNPAAQQIEVVRGEVAPDALFGCGLYDAAGKIPDVAAWLGEERARAAAARAAAAAPAWRKPGAAPRHGAAARHDEG
IASHVLVFDAPLTWYGFSDALGVILQAYGDRILRVKGLMNIAGDPLPRVVQCVQHVAYPPASLPAWPTRPPYDDRRSRLV
FIVRDLPRSELEQIFFGVAGVPVMPQ

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI126722884, Length=369, Percent_Identity=28.4552845528455, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI33469141, Length=369, Percent_Identity=28.4552845528455, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI148727351, Length=369, Percent_Identity=28.4552845528455, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI146231952, Length=368, Percent_Identity=27.9891304347826, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI223941779, Length=360, Percent_Identity=27.7777777777778, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI223941776, Length=358, Percent_Identity=27.3743016759777, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI119120938, Length=169, Percent_Identity=32.5443786982249, Blast_Score=89, Evalue=8e-18,
Organism=Escherichia coli, GI87082430, Length=349, Percent_Identity=34.6704871060172, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1788499, Length=168, Percent_Identity=35.1190476190476, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324356, Length=382, Percent_Identity=24.6073298429319, Blast_Score=101, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 46157; Mature: 46157

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRGQSVGPGSFRVYWQAASRAGLPPSSRPVRTEGKGRYRSWTARPYHSLLTSPHHAVP
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
MTPDTPDRRIPVTVLTGFLGAGKTTLLNHLLRQPGMEGCAVLINEFGEVGVDHHLVEKVD
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHC
ETLIVLDSGCICCSVQGDLVKALKGLFMRALRREIPALRRVLIETTGLADPAPVIFTLME
CEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
EPFIAERYRCDGVVTAVDATHADGQLDRQREAVRQVAMADRLLITKCDLADAAVRAGLSV
CCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHCCCEE
RLAQLNPAAQQIEVVRGEVAPDALFGCGLYDAAGKIPDVAAWLGEERARAAAARAAAAAP
EEECCCHHHHHHHHHHCCCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
AWRKPGAAPRHGAAARHDEGIASHVLVFDAPLTWYGFSDALGVILQAYGDRILRVKGLMN
CCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCEECCHHHHHHHHHHHHCCHHEEHHHHHH
IAGDPLPRVVQCVQHVAYPPASLPAWPTRPPYDDRRSRLVFIVRDLPRSELEQIFFGVAG
HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCC
VPVMPQ
CCCCCC
>Mature Secondary Structure
MKGRGQSVGPGSFRVYWQAASRAGLPPSSRPVRTEGKGRYRSWTARPYHSLLTSPHHAVP
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
MTPDTPDRRIPVTVLTGFLGAGKTTLLNHLLRQPGMEGCAVLINEFGEVGVDHHLVEKVD
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHC
ETLIVLDSGCICCSVQGDLVKALKGLFMRALRREIPALRRVLIETTGLADPAPVIFTLME
CEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
EPFIAERYRCDGVVTAVDATHADGQLDRQREAVRQVAMADRLLITKCDLADAAVRAGLSV
CCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHCCCEE
RLAQLNPAAQQIEVVRGEVAPDALFGCGLYDAAGKIPDVAAWLGEERARAAAARAAAAAP
EEECCCHHHHHHHHHHCCCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
AWRKPGAAPRHGAAARHDEGIASHVLVFDAPLTWYGFSDALGVILQAYGDRILRVKGLMN
CCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCEECCHHHHHHHHHHHHCCHHEEHHHHHH
IAGDPLPRVVQCVQHVAYPPASLPAWPTRPPYDDRRSRLVFIVRDLPRSELEQIFFGVAG
HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCC
VPVMPQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]