| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is glnM [H]
Identifier: 119896731
GI number: 119896731
Start: 465947
End: 466627
Strand: Reverse
Name: glnM [H]
Synonym: azo0440
Alternate gene names: 119896731
Gene position: 466627-465947 (Counterclockwise)
Preceding gene: 119896732
Following gene: 119896730
Centisome position: 10.66
GC content: 64.9
Gene sequence:
>681_bases ATGGGCGATTTCGAATTCGGCGTCATCGCCGACAACTGGCGCTTCCTGGCCGAGGGCCTGCGCTACACGGTGCAGGTCAC CCTGGTCGCCACCATCGGCGGCATCTTCCTCGGCACGCTGCTGGCGCTGATGCGGCTGTCGTCGGTGAAGCCGCTGCAGT GGTTCGCGGTGGGCTACATCAACTTCTTCCGCAGCGTGCCGCTGGTGCAGGTGATCCTGGCCTTCTACCTGATCATCCCG ATGGTGCTGCAGATGTTCACCGGCAAGCCGATGCCGATCGGCGCGGAGAACTCGGCCTACTTCACCTTCACGGTGTTCGA GGCGGCGTATTTCGCCGAGATCATGCGCTCCGGCATCCAGTCCATCCCGCGCGGCCAGATCGGCGCCGGCTACGCGCTCG GCTTCACCTACGGCCAGACGATGCGGCTGGTGGTGCTGCCGCAGGCCTTCCGCAACATGCTGCCGGTGCTGCTGACGCAA ACCATCGTGCTGTTCCAGGACGTGTCGCTGGTGTATGCAATCGGCGCCACCGACTTCTTCGGCGCGGCCGACAAGATCAC CCAGCGCGACCTGCGCCCGGTGGAGATGTACACCACGGTGGCGGCGGTCTATTTCGTCCTCTGCTTCAGCCTCTCGCGGC TGGTGAAGCGGCTGCAGACCCGCATCGCCATCATCCGCTGA
Upstream 100 bases:
>100_bases TACTTCGTGCTGGCGTTCGCGATGAACCGCCTGCTGGGCTTCATCGAGAAGCGCACGCGGGTGCCTGGCCTCATCACCGG CGGCAGCGGAGGACACTGAG
Downstream 100 bases:
>100_bases CCCTCCCCCCGTATTCCCGGAGCATCCCGACATGATCGAGATCAACAACGTTTCCAAGTGGTATGGCGACTTCCAGGTGC TGACCGACTGCACCACGGGG
Product: putative glutamine transport permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MGDFEFGVIADNWRFLAEGLRYTVQVTLVATIGGIFLGTLLALMRLSSVKPLQWFAVGYINFFRSVPLVQVILAFYLIIP MVLQMFTGKPMPIGAENSAYFTFTVFEAAYFAEIMRSGIQSIPRGQIGAGYALGFTYGQTMRLVVLPQAFRNMLPVLLTQ TIVLFQDVSLVYAIGATDFFGAADKITQRDLRPVEMYTTVAAVYFVLCFSLSRLVKRLQTRIAIIR
Sequences:
>Translated_226_residues MGDFEFGVIADNWRFLAEGLRYTVQVTLVATIGGIFLGTLLALMRLSSVKPLQWFAVGYINFFRSVPLVQVILAFYLIIP MVLQMFTGKPMPIGAENSAYFTFTVFEAAYFAEIMRSGIQSIPRGQIGAGYALGFTYGQTMRLVVLPQAFRNMLPVLLTQ TIVLFQDVSLVYAIGATDFFGAADKITQRDLRPVEMYTTVAAVYFVLCFSLSRLVKRLQTRIAIIR >Mature_225_residues GDFEFGVIADNWRFLAEGLRYTVQVTLVATIGGIFLGTLLALMRLSSVKPLQWFAVGYINFFRSVPLVQVILAFYLIIPM VLQMFTGKPMPIGAENSAYFTFTVFEAAYFAEIMRSGIQSIPRGQIGAGYALGFTYGQTMRLVVLPQAFRNMLPVLLTQT IVLFQDVSLVYAIGATDFFGAADKITQRDLRPVEMYTTVAAVYFVLCFSLSRLVKRLQTRIAIIR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=224, Percent_Identity=50.4464285714286, Blast_Score=206, Evalue=9e-55, Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=35.3488372093023, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI87082239, Length=206, Percent_Identity=33.9805825242718, Blast_Score=110, Evalue=6e-26, Organism=Escherichia coli, GI1787030, Length=223, Percent_Identity=29.5964125560538, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786874, Length=201, Percent_Identity=27.8606965174129, Blast_Score=86, Evalue=1e-18, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=26.0089686098655, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1788645, Length=225, Percent_Identity=27.1111111111111, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI48994930, Length=125, Percent_Identity=32.8, Blast_Score=74, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25306; Mature: 25175
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDFEFGVIADNWRFLAEGLRYTVQVTLVATIGGIFLGTLLALMRLSSVKPLQWFAVGYI CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH NFFRSVPLVQVILAFYLIIPMVLQMFTGKPMPIGAENSAYFTFTVFEAAYFAEIMRSGIQ HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH SIPRGQIGAGYALGFTYGQTMRLVVLPQAFRNMLPVLLTQTIVLFQDVSLVYAIGATDFF HCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHH GAADKITQRDLRPVEMYTTVAAVYFVLCFSLSRLVKRLQTRIAIIR CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GDFEFGVIADNWRFLAEGLRYTVQVTLVATIGGIFLGTLLALMRLSSVKPLQWFAVGYI CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH NFFRSVPLVQVILAFYLIIPMVLQMFTGKPMPIGAENSAYFTFTVFEAAYFAEIMRSGIQ HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH SIPRGQIGAGYALGFTYGQTMRLVVLPQAFRNMLPVLLTQTIVLFQDVSLVYAIGATDFF HCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHH GAADKITQRDLRPVEMYTTVAAVYFVLCFSLSRLVKRLQTRIAIIR CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]