Click here to switch to the map view.

The map label for this gene is tolR [H]

Identifier: 119896710

GI number: 119896710

Start: 444289

End: 444702

Strand: Reverse

Name: tolR [H]

Synonym: azo0419

Alternate gene names: 119896710

Gene position: 444702-444289 (Counterclockwise)

Preceding gene: 119896711

Following gene: 119896709

Centisome position: 10.16

GC content: 64.98

Gene sequence:

>414_bases
ATGCGCCAACGCCGCCTGATGAACCAGATCAACGTCGTGCCCTACATCGACGTGATGCTGGTCCTGCTCGTCATCTTCAT
GGTCACCGCGCCGATGGTGCAGCCGGGCAACATCGACGTGCCGTCCGCCGGACCGATCTCGGCGCCGCCCGCCGAGGCCA
TCGTGATCGAGCTGGAAAAGCGCAACGCGATCGCGATCCGCAAGACCAGCAATGCTGCCTCGCGCCCGGTGTCCAGCATT
GAATTCCAGCGCGTGGTCAAGGAAGCGCTGGCCGCCAACCCGGAGCAACCCTTCCTGGTGGCCGCCAACAAGAGCCTGCC
CTACCAGGACGTCATCGACATCCTCGAAGCCGCGCGCCAGTTGGGGGTGAAGAAGATCAGCCTGCAGACCCAGTCGGGCG
CCGCCGGTCGATGA

Upstream 100 bases:

>100_bases
GCACGACATCGACCGCATCGGCATCCGCTTCGAGAGCTTCATGGAAGAGTTCTCCAACATCCTGCAGCGCAACCTGCGCT
AAGGCGGCGGGGACTCAGCC

Downstream 100 bases:

>100_bases
ACGAACGCGCACTTCCCCACGAACATCCGGGCAAGTGGGCTTCGCTCGCGCTGACCTTTGCGGTCCACATCGGGCTGGCG
CTGTTCCTGTTCTTCGGCAT

Product: putative translocation protein TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MRQRRLMNQINVVPYIDVMLVLLVIFMVTAPMVQPGNIDVPSAGPISAPPAEAIVIELEKRNAIAIRKTSNAASRPVSSI
EFQRVVKEALAANPEQPFLVAANKSLPYQDVIDILEAARQLGVKKISLQTQSGAAGR

Sequences:

>Translated_137_residues
MRQRRLMNQINVVPYIDVMLVLLVIFMVTAPMVQPGNIDVPSAGPISAPPAEAIVIELEKRNAIAIRKTSNAASRPVSSI
EFQRVVKEALAANPEQPFLVAANKSLPYQDVIDILEAARQLGVKKISLQTQSGAAGR
>Mature_137_residues
MRQRRLMNQINVVPYIDVMLVLLVIFMVTAPMVQPGNIDVPSAGPISAPPAEAIVIELEKRNAIAIRKTSNAASRPVSSI
EFQRVVKEALAANPEQPFLVAANKSLPYQDVIDILEAARQLGVKKISLQTQSGAAGR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 14856; Mature: 14856

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRRLMNQINVVPYIDVMLVLLVIFMVTAPMVQPGNIDVPSAGPISAPPAEAIVIELEK
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
RNAIAIRKTSNAASRPVSSIEFQRVVKEALAANPEQPFLVAANKSLPYQDVIDILEAARQ
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH
LGVKKISLQTQSGAAGR
CCCCEEEEECCCCCCCC
>Mature Secondary Structure
MRQRRLMNQINVVPYIDVMLVLLVIFMVTAPMVQPGNIDVPSAGPISAPPAEAIVIELEK
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
RNAIAIRKTSNAASRPVSSIEFQRVVKEALAANPEQPFLVAANKSLPYQDVIDILEAARQ
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH
LGVKKISLQTQSGAAGR
CCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]