| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is ycbL [C]
Identifier: 119896681
GI number: 119896681
Start: 416816
End: 417844
Strand: Reverse
Name: ycbL [C]
Synonym: azo0390
Alternate gene names: 119896681
Gene position: 417844-416816 (Counterclockwise)
Preceding gene: 119896693
Following gene: 119896680
Centisome position: 9.55
GC content: 65.5
Gene sequence:
>1029_bases ATGAGCACAGAACAGCAGATCGAATATCCGGTGGCCGACCTGCCGGCCCCGGGCACCGCCGTCGAAATCGCCCCCGGCAT CCGCTGGATCCGGATGCCCTTGCCCTTCGCGCTGGACCACATCAACCTGTGGCTGCTGGACGACGGCGACGAGGTCGCCG TGATCGACACGGGTTTCGGGCTCGAGCCGATCCAGGCCAACTGGGAGGCGGTGCTGGCCGCCGAACCGCGTCCGCTGAGC CGCGTTTTCGTCACCCACCACCATCCGGATCACCTTGGCCTGGCCAGTTGGCTGATGCAGCGCAACGGCGCCACGCTGCA CATGTCGCTGGGAGAGTTTCTCGGCGGTCAGGCCGTCTGGCACCAGTTGCCCGGCTATTCGGTGGCCGACATGGTCGCAC AGTTCCGCATCCACGGGCTCGACGACGCGCGCCTGTCCGCACTCGCCGAACGCGGCAACGCCTACCGCCGCGGCATCCCG GAGATTCCCCAGCAATACAGCCGTCTTTTCGATGGCGACCAGGTCGAAATCGGCGGCCAGCGCTGGGAAGTCATCGTCGG CTACGGCCACGCGCCCGAACATGTGAGCCTGTATTGCGAGCGTCTCGGCGTGCTCGTTTCGGGTGACATGCTGCTGCCAC GAATCTCCACCAACATCAGCGTCTATGCCGCCACGCCGGACGACGATCCGCTCGGCTGGTTCCTGGATTCGCTGCGCCGC ATCAGTCACTTGCCTGACAATACGCTCGTGCTACCATCCCACGGCAGACCTTTCAAGGGCATCAGGGCGCGGGTGGCGCA ACTCATCGCCCACCACCGCGAACGCTGCGACGCACTCGTCGCCGCCTGTACCCAGCCGCGCTCGGCGGCCGACCTGCTCG GCACCCTGTTTGCACGCGCGCTCGATACCCATCAGGTCATGTTCGCCATGGGGGAGGCGATCGCCCATCTCAACTACCTG GTAAAGCGGGGAGAGCTATGCCGGGTGGGCAATCCTGAGACGGGCATCCGACACACCATAACCAGATAG
Upstream 100 bases:
>100_bases GTCCGTCTGCGACCGGGGTGGCCGCAGCGGGAATTATTAACCAAACAAGGAGCACAGCGCCCCCGCCTCATCCGCGAGCC CGGCGCCCCGTCCCCAACCG
Downstream 100 bases:
>100_bases CAGTCCGCCCCGGACTGCGGGAACGAGGAGTGGAACACCAATGGCTGCACCCGAGACCCAGCACATGCATCCCGAACTGC CCGACCCCAAGGAAGTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta Lactamase; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Domain Protein; Zinc Metallohydrolase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Zinc Metallohydrolase Glyoxalase II Family; Metal-Dependent Hydrolase; Metallo-Dependent Enzymatic Protein; Metallo-Beta-Lactamase Family Hydrolase; Hydrolase; AMP-Dependent Synthetase And Ligase; Metal Dependent Hydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSTEQQIEYPVADLPAPGTAVEIAPGIRWIRMPLPFALDHINLWLLDDGDEVAVIDTGFGLEPIQANWEAVLAAEPRPLS RVFVTHHHPDHLGLASWLMQRNGATLHMSLGEFLGGQAVWHQLPGYSVADMVAQFRIHGLDDARLSALAERGNAYRRGIP EIPQQYSRLFDGDQVEIGGQRWEVIVGYGHAPEHVSLYCERLGVLVSGDMLLPRISTNISVYAATPDDDPLGWFLDSLRR ISHLPDNTLVLPSHGRPFKGIRARVAQLIAHHRERCDALVAACTQPRSAADLLGTLFARALDTHQVMFAMGEAIAHLNYL VKRGELCRVGNPETGIRHTITR
Sequences:
>Translated_342_residues MSTEQQIEYPVADLPAPGTAVEIAPGIRWIRMPLPFALDHINLWLLDDGDEVAVIDTGFGLEPIQANWEAVLAAEPRPLS RVFVTHHHPDHLGLASWLMQRNGATLHMSLGEFLGGQAVWHQLPGYSVADMVAQFRIHGLDDARLSALAERGNAYRRGIP EIPQQYSRLFDGDQVEIGGQRWEVIVGYGHAPEHVSLYCERLGVLVSGDMLLPRISTNISVYAATPDDDPLGWFLDSLRR ISHLPDNTLVLPSHGRPFKGIRARVAQLIAHHRERCDALVAACTQPRSAADLLGTLFARALDTHQVMFAMGEAIAHLNYL VKRGELCRVGNPETGIRHTITR >Mature_341_residues STEQQIEYPVADLPAPGTAVEIAPGIRWIRMPLPFALDHINLWLLDDGDEVAVIDTGFGLEPIQANWEAVLAAEPRPLSR VFVTHHHPDHLGLASWLMQRNGATLHMSLGEFLGGQAVWHQLPGYSVADMVAQFRIHGLDDARLSALAERGNAYRRGIPE IPQQYSRLFDGDQVEIGGQRWEVIVGYGHAPEHVSLYCERLGVLVSGDMLLPRISTNISVYAATPDDDPLGWFLDSLRRI SHLPDNTLVLPSHGRPFKGIRARVAQLIAHHRERCDALVAACTQPRSAADLLGTLFARALDTHQVMFAMGEAIAHLNYLV KRGELCRVGNPETGIRHTITR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37884; Mature: 37753
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEQQIEYPVADLPAPGTAVEIAPGIRWIRMPLPFALDHINLWLLDDGDEVAVIDTGFG CCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCEEECCEEEEEEECCCEEEEEECCCC LEPIQANWEAVLAAEPRPLSRVFVTHHHPDHLGLASWLMQRNGATLHMSLGEFLGGQAVW CCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHCCHHHH HQLPGYSVADMVAQFRIHGLDDARLSALAERGNAYRRGIPEIPQQYSRLFDGDQVEIGGQ HHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCEEEECCC RWEVIVGYGHAPEHVSLYCERLGVLVSGDMLLPRISTNISVYAATPDDDPLGWFLDSLRR EEEEEEECCCCCHHHHHHHHHHCCEEECCEEECEECCCEEEEEECCCCCCHHHHHHHHHH ISHLPDNTLVLPSHGRPFKGIRARVAQLIAHHRERCDALVAACTQPRSAADLLGTLFARA HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LDTHQVMFAMGEAIAHLNYLVKRGELCRVGNPETGIRHTITR HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure STEQQIEYPVADLPAPGTAVEIAPGIRWIRMPLPFALDHINLWLLDDGDEVAVIDTGFG CCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCEEECCEEEEEEECCCEEEEEECCCC LEPIQANWEAVLAAEPRPLSRVFVTHHHPDHLGLASWLMQRNGATLHMSLGEFLGGQAVW CCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHCCHHHH HQLPGYSVADMVAQFRIHGLDDARLSALAERGNAYRRGIPEIPQQYSRLFDGDQVEIGGQ HHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCEEEECCC RWEVIVGYGHAPEHVSLYCERLGVLVSGDMLLPRISTNISVYAATPDDDPLGWFLDSLRR EEEEEEECCCCCHHHHHHHHHHCCEEECCEEECEECCCEEEEEECCCCCCHHHHHHHHHH ISHLPDNTLVLPSHGRPFKGIRARVAQLIAHHRERCDALVAACTQPRSAADLLGTLFARA HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LDTHQVMFAMGEAIAHLNYLVKRGELCRVGNPETGIRHTITR HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA