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The map label for this gene is ydcN [C]

Identifier: 119896658

GI number: 119896658

Start: 390251

End: 390484

Strand: Direct

Name: ydcN [C]

Synonym: azo0367

Alternate gene names: 119896658

Gene position: 390251-390484 (Clockwise)

Preceding gene: 119896657

Following gene: 119896659

Centisome position: 8.92

GC content: 69.66

Gene sequence:

>234_bases
GTGAGCCCCGCCAGCGTGATTGCTTCGTTCGGCGCGGCGGTACGGCAGTTCCGCGAGCGCCACGGCTGGTCGCAGGAACT
GCTGGCCGAGCGCGCGGACCTCAACCGGTCCTATCTCGGCGAGGTCGAGCGCGGCACCGTGGTGCCTTCGCTGGCCACGG
CGGTCAAGCTGGCCGCGGCGCTCGATATTCCGCTCTCCAACCTGCTGTCGCATTGCGAGAACGGCCGCTCCTGA

Upstream 100 bases:

>100_bases
TCGGCGGCAATGTGTGGCTGACGCGCAGCGTGCCGCCCGGCAGCCACGTGTCGCAGGCCAGCCTGCAGCACGAGTCGGCC
GCGCAGCGGGTGGCCGCATC

Downstream 100 bases:

>100_bases
AGTTCCACGCGCGGACCGGGATGATGGCTATAGCATGTTGAAGCGGCCCCGCCCCGGTCACGACAATCCAACGCAGATTT
CCTGCATTGCATTTCACGAC

Product: SgrAlc control protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Protein; SgrAlc Control Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSPASVIASFGAAVRQFRERHGWSQELLAERADLNRSYLGEVERGTVVPSLATAVKLAAALDIPLSNLLSHCENGRS

Sequences:

>Translated_77_residues
MSPASVIASFGAAVRQFRERHGWSQELLAERADLNRSYLGEVERGTVVPSLATAVKLAAALDIPLSNLLSHCENGRS
>Mature_76_residues
SPASVIASFGAAVRQFRERHGWSQELLAERADLNRSYLGEVERGTVVPSLATAVKLAAALDIPLSNLLSHCENGRS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8292; Mature: 8161

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPASVIASFGAAVRQFRERHGWSQELLAERADLNRSYLGEVERGTVVPSLATAVKLAAA
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHH
LDIPLSNLLSHCENGRS
HCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SPASVIASFGAAVRQFRERHGWSQELLAERADLNRSYLGEVERGTVVPSLATAVKLAAA
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHH
LDIPLSNLLSHCENGRS
HCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA