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The map label for this gene is paaD [H]

Identifier: 119896598

GI number: 119896598

Start: 331218

End: 331709

Strand: Direct

Name: paaD [H]

Synonym: azo0307

Alternate gene names: 119896598

Gene position: 331218-331709 (Clockwise)

Preceding gene: 119896597

Following gene: 119896599

Centisome position: 7.57

GC content: 71.54

Gene sequence:

>492_bases
ATGCTGACCGAAACCGAGGCCTGGCAGGCACTGGACGCCGTGCCCGATCCCGAGATCCCGGTGGTCTCGGTGACCGAGCT
GGGCATCATCCGCGAAGTGCGCTGCAACGACGGTGCCGTCACCGTGGTGGTGACGCCCACCTACTCCGGCTGCCCCGCCA
CCGAGGTGATCGGGCTCGCGGTGCGCGACGCGCTGCTCGCCGCCGGCGCGCGCGAGGTGGCGATGGAAACGCAGCTGCAC
CCGGCGTGGACCAGCGACTGGATCGGCGAGGCCGCGCGCGAGAAGCTGCGCGCCTACGGCATCGTCCCGCCCGAGGGGCG
CGCCGCGCCCGCCGCGGTGCAGCCGATCCGCTTCATGCGCCGCACGCTCGCCTGCCCGCGCTGCGGCTCGACCGACACCG
AACGATTGACCGAATTCGGCTCGACCGCGTGCAAGGCCACCTGGCGCTGCCGCGCCTGCCTCGAACCGTTCGAATACTTC
AAACCGATCTGA

Upstream 100 bases:

>100_bases
TGCAGTACATGCAGCGCACCTATCCGGGCGCGCAGTGGTGAGACGGGACATGGATACGGCCGCCTGGCGGCCCTTCCGTG
CCTTGCGAGGGAGAGCAGGC

Downstream 100 bases:

>100_bases
TCCGGGCGATCGACCCGGACACGGAGACAGACATGACGCCACGATTCCACCCGCTCAAGGTCGCCGAAGTGCGCCGCGAA
ACCGCCGACTCGGTGAGCCT

Product: phenylacetic acid degradation protein PaaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLTETEAWQALDAVPDPEIPVVSVTELGIIREVRCNDGAVTVVVTPTYSGCPATEVIGLAVRDALLAAGAREVAMETQLH
PAWTSDWIGEAAREKLRAYGIVPPEGRAAPAAVQPIRFMRRTLACPRCGSTDTERLTEFGSTACKATWRCRACLEPFEYF
KPI

Sequences:

>Translated_163_residues
MLTETEAWQALDAVPDPEIPVVSVTELGIIREVRCNDGAVTVVVTPTYSGCPATEVIGLAVRDALLAAGAREVAMETQLH
PAWTSDWIGEAAREKLRAYGIVPPEGRAAPAAVQPIRFMRRTLACPRCGSTDTERLTEFGSTACKATWRCRACLEPFEYF
KPI
>Mature_163_residues
MLTETEAWQALDAVPDPEIPVVSVTELGIIREVRCNDGAVTVVVTPTYSGCPATEVIGLAVRDALLAAGAREVAMETQLH
PAWTSDWIGEAAREKLRAYGIVPPEGRAAPAAVQPIRFMRRTLACPRCGSTDTERLTEFGSTACKATWRCRACLEPFEYF
KPI

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510939, Length=158, Percent_Identity=48.7341772151899, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744
- InterPro:   IPR011883 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 17749; Mature: 17749

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTETEAWQALDAVPDPEIPVVSVTELGIIREVRCNDGAVTVVVTPTYSGCPATEVIGLA
CCCCCHHHHHHHCCCCCCCCEEEHHHHCHHEEEECCCCEEEEEECCCCCCCCHHHHHHHH
VRDALLAAGAREVAMETQLHPAWTSDWIGEAAREKLRAYGIVPPEGRAAPAAVQPIRFMR
HHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
RTLACPRCGSTDTERLTEFGSTACKATWRCRACLEPFEYFKPI
HHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHCCC
>Mature Secondary Structure
MLTETEAWQALDAVPDPEIPVVSVTELGIIREVRCNDGAVTVVVTPTYSGCPATEVIGLA
CCCCCHHHHHHHCCCCCCCCEEEHHHHCHHEEEECCCCEEEEEECCCCCCCCHHHHHHHH
VRDALLAAGAREVAMETQLHPAWTSDWIGEAAREKLRAYGIVPPEGRAAPAAVQPIRFMR
HHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
RTLACPRCGSTDTERLTEFGSTACKATWRCRACLEPFEYFKPI
HHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]