| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is flp [H]
Identifier: 119896585
GI number: 119896585
Start: 317928
End: 319742
Strand: Reverse
Name: flp [H]
Synonym: azo0294
Alternate gene names: 119896585
Gene position: 319742-317928 (Counterclockwise)
Preceding gene: 119896587
Following gene: 119896584
Centisome position: 7.31
GC content: 70.19
Gene sequence:
>1815_bases ATGCCCGCCTCGCCCCGCCCCGCCGCCCGCATCGCCCACCCCGTCGCCGCGCTGGCCCGCCGCCTGCTCGCCCCGGCCGC GATCCTGCTGCTGGGCGCCTGCGCGGCCATCCAGCCGCCGCCGCGACCCGCCCACGTCGGCTCCGGCGACTACGCCTACA CGCGCGACTACCTGCGCTGGCTGATCGGGCAGGAGATGGAAGAGAACCGCATCACCGGACTGTCGATCGCGCTGGTCGAC GATCAGCGCGTGGTGTGGGCGGAAGGCTTCGGCAAGGAAGACGCCGAGCGCGACGTCGCCGCCGGCCCGCACACGCGTTA CCGCATGGGTTCGATCGCGAAGGTGCTGACCGCGACCGCGGCGATGCAGATGGCCGAGCGCGGCGAGATCGACATCGACC GCCCGCTGGCCGACTACCTGCCCGGCTTTTCGGTGCGCTCGCGCTTTGACGACCGCACCCCGATCACGCCGCGCAACATC ATGCACCACCACTCCGGGCTGCCGGCGAACTACCTGAAGGGCATGATGGGCGGGGATCCGCCGCCCTTCACCACGCTGGT GGAGGCCGTGCGCGAGGAATACGTCGCCTACCCGCCGGAATTCATCTTCGGCTACTCCAACCTGGCCGTCACACTGCTCG GCGCGGCGCTCGAACAGCGCGCCGGCCTGCCCTTCGCCGACCACATGGCGAAAAGCCTGATCGAACCGCTGGGCATGACC GAGACCCGCTTCGAATCCAACCCTGCGCTGCGGGTGTACGACGCGCGCGGGCAGATCGAGGCGCTGCCGCTGCGCGACCT GCCCTCGGGCGGGCTGGTTTCCAGCGTGGCCGACATGAGCCGCTTCATGCGCATGGTGTTCGCCGGCGGACGCAGCGGAA ACACCCAGCTGCTGCGCCCCGAAACCCTGCACGAGATGCTGCGCGCGCAGAACGAACACATCGCGCTCGACCTCGGTTTC CGCGTCGGCCTGGGCTGGCTGCTGTCGGGCATCGAGATCCGCAACGCCGGCCTCGTCGCCAGCCACGGCGGCACCCTGTT CGATTCGCACAGCATGATGGTGGTGCTGCCCGAGCACAAACTCGGCGTCATCGTCGCCTCCAACTCGGGCACCTCGCAGG GCACGGTCAAGAAGATCGCCACCGAGGCGCTGATCCACGCGCTCGAAGCCAAGGCCGGCATCCGCCAGCCGGAGGCCGCC GCGATCGCGCAGCCCGAAGTGCGGCTGGCGCCGGAGCAGCTGGCGTCCTATTCGGCCTGGTACGACTCCATGGTCGGCCT CATCCGGGTCAAGCCGCGCGCGGGCGCGCTCGATGCCGACGTGATGGGCCACACGCTGCAGCTGCGCGCCCAGCCGGGCG GCCAGTTCGGCCTGCGCTACAAGCTGTTCGGCCTGATTCCGGTGCAGGTCGGCGCGTTCGACGGCGTGCGCATCTCGGCG GCGGCGATCGGCGGCCACGAAGTGCTGGTGGGCCACTTCGGCGACGACACCATGCTGGTCGGCGAAAAGCTCGCGCCGCG CCCGATCCCGCGCACCATGCTCGACTACGTCGGCGAATACGAGATCGTCGGCAAACCGCCCGGCCTCGCGCCGGACCGCC TCGCGCTGCGCGTGGAAGACGGCATGCTGATCGGCGAATGCAGCTTCTCGGAGTTGCCCGGCTTCATGCTGCGGATCGCG CTCAACCCGATCTCGCCGACCGAGGCGGTCATCTCCGGCCTGGGCACCGGCAAGGGCGAAACCATCCGCATCCTGCCGGG TGAAGGCCGCCGCCTGCTGTTCTCCGGCCTCGAACTGCGCCAGAAGACCAACTGA
Upstream 100 bases:
>100_bases CGCGCGAGGAATCAGCGCACGGCGCCGACTTTCACACGGCGCCGTGCGGCCCCGTCACGTAACATCGCCGCCGCCCCGAT TCATCCGACGTTCCAGCGCC
Downstream 100 bases:
>100_bases GGCCCCTCGCCCCGTGAAGAAAGTCCTCGTCGTCCATTACTCGCAGACCGGCCAGCTCGCCGACATCGTCGGCACGCTGC TGCAGCCGCTGCGCGCGGCG
Product: putative penicillin-binding protein
Products: NA
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 604; Mature: 603
Protein sequence:
>604_residues MPASPRPAARIAHPVAALARRLLAPAAILLLGACAAIQPPPRPAHVGSGDYAYTRDYLRWLIGQEMEENRITGLSIALVD DQRVVWAEGFGKEDAERDVAAGPHTRYRMGSIAKVLTATAAMQMAERGEIDIDRPLADYLPGFSVRSRFDDRTPITPRNI MHHHSGLPANYLKGMMGGDPPPFTTLVEAVREEYVAYPPEFIFGYSNLAVTLLGAALEQRAGLPFADHMAKSLIEPLGMT ETRFESNPALRVYDARGQIEALPLRDLPSGGLVSSVADMSRFMRMVFAGGRSGNTQLLRPETLHEMLRAQNEHIALDLGF RVGLGWLLSGIEIRNAGLVASHGGTLFDSHSMMVVLPEHKLGVIVASNSGTSQGTVKKIATEALIHALEAKAGIRQPEAA AIAQPEVRLAPEQLASYSAWYDSMVGLIRVKPRAGALDADVMGHTLQLRAQPGGQFGLRYKLFGLIPVQVGAFDGVRISA AAIGGHEVLVGHFGDDTMLVGEKLAPRPIPRTMLDYVGEYEIVGKPPGLAPDRLALRVEDGMLIGECSFSELPGFMLRIA LNPISPTEAVISGLGTGKGETIRILPGEGRRLLFSGLELRQKTN
Sequences:
>Translated_604_residues MPASPRPAARIAHPVAALARRLLAPAAILLLGACAAIQPPPRPAHVGSGDYAYTRDYLRWLIGQEMEENRITGLSIALVD DQRVVWAEGFGKEDAERDVAAGPHTRYRMGSIAKVLTATAAMQMAERGEIDIDRPLADYLPGFSVRSRFDDRTPITPRNI MHHHSGLPANYLKGMMGGDPPPFTTLVEAVREEYVAYPPEFIFGYSNLAVTLLGAALEQRAGLPFADHMAKSLIEPLGMT ETRFESNPALRVYDARGQIEALPLRDLPSGGLVSSVADMSRFMRMVFAGGRSGNTQLLRPETLHEMLRAQNEHIALDLGF RVGLGWLLSGIEIRNAGLVASHGGTLFDSHSMMVVLPEHKLGVIVASNSGTSQGTVKKIATEALIHALEAKAGIRQPEAA AIAQPEVRLAPEQLASYSAWYDSMVGLIRVKPRAGALDADVMGHTLQLRAQPGGQFGLRYKLFGLIPVQVGAFDGVRISA AAIGGHEVLVGHFGDDTMLVGEKLAPRPIPRTMLDYVGEYEIVGKPPGLAPDRLALRVEDGMLIGECSFSELPGFMLRIA LNPISPTEAVISGLGTGKGETIRILPGEGRRLLFSGLELRQKTN >Mature_603_residues PASPRPAARIAHPVAALARRLLAPAAILLLGACAAIQPPPRPAHVGSGDYAYTRDYLRWLIGQEMEENRITGLSIALVDD QRVVWAEGFGKEDAERDVAAGPHTRYRMGSIAKVLTATAAMQMAERGEIDIDRPLADYLPGFSVRSRFDDRTPITPRNIM HHHSGLPANYLKGMMGGDPPPFTTLVEAVREEYVAYPPEFIFGYSNLAVTLLGAALEQRAGLPFADHMAKSLIEPLGMTE TRFESNPALRVYDARGQIEALPLRDLPSGGLVSSVADMSRFMRMVFAGGRSGNTQLLRPETLHEMLRAQNEHIALDLGFR VGLGWLLSGIEIRNAGLVASHGGTLFDSHSMMVVLPEHKLGVIVASNSGTSQGTVKKIATEALIHALEAKAGIRQPEAAA IAQPEVRLAPEQLASYSAWYDSMVGLIRVKPRAGALDADVMGHTLQLRAQPGGQFGLRYKLFGLIPVQVGAFDGVRISAA AIGGHEVLVGHFGDDTMLVGEKLAPRPIPRTMLDYVGEYEIVGKPPGLAPDRLALRVEDGMLIGECSFSELPGFMLRIAL NPISPTEAVISGLGTGKGETIRILPGEGRRLLFSGLELRQKTN
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI239747261, Length=278, Percent_Identity=24.1007194244604, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI239752721, Length=278, Percent_Identity=24.1007194244604, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI239741085, Length=278, Percent_Identity=24.1007194244604, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI26051231, Length=128, Percent_Identity=31.25, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI26051233, Length=128, Percent_Identity=31.25, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1786574, Length=309, Percent_Identity=25.5663430420712, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI87082101, Length=312, Percent_Identity=25, Blast_Score=75, Evalue=9e-15, Organism=Caenorhabditis elegans, GI115533026, Length=339, Percent_Identity=25.9587020648968, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17550934, Length=288, Percent_Identity=27.4305555555556, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 65173; Mature: 65042
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASPRPAARIAHPVAALARRLLAPAAILLLGACAAIQPPPRPAHVGSGDYAYTRDYLRW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH LIGQEMEENRITGLSIALVDDQRVVWAEGFGKEDAERDVAAGPHTRYRMGSIAKVLTATA HHCCCHHCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AMQMAERGEIDIDRPLADYLPGFSVRSRFDDRTPITPRNIMHHHSGLPANYLKGMMGGDP HHHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCC PPFTTLVEAVREEYVAYPPEFIFGYSNLAVTLLGAALEQRAGLPFADHMAKSLIEPLGMT CCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC ETRFESNPALRVYDARGQIEALPLRDLPSGGLVSSVADMSRFMRMVFAGGRSGNTQLLRP HHHCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECH ETLHEMLRAQNEHIALDLGFRVGLGWLLSGIEIRNAGLVASHGGTLFDSHSMMVVLPEHK HHHHHHHHCCCCEEEEEECHHHHHHHHHCCCEEECCCEEEECCCEEEECCCEEEEECCCC LGVIVASNSGTSQGTVKKIATEALIHALEAKAGIRQPEAAAIAQPEVRLAPEQLASYSAW EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEECHHHHHHHHHH YDSMVGLIRVKPRAGALDADVMGHTLQLRAQPGGQFGLRYKLFGLIPVQVGAFDGVRISA HHHCEEEEEECCCCCCCCHHHCCCEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEE AAIGGHEVLVGHFGDDTMLVGEKLAPRPIPRTMLDYVGEYEIVGKPPGLAPDRLALRVED EEECCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEC GMLIGECSFSELPGFMLRIALNPISPTEAVISGLGTGKGETIRILPGEGRRLLFSGLELR CEEEEECCHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEECCHHHH QKTN HCCC >Mature Secondary Structure PASPRPAARIAHPVAALARRLLAPAAILLLGACAAIQPPPRPAHVGSGDYAYTRDYLRW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH LIGQEMEENRITGLSIALVDDQRVVWAEGFGKEDAERDVAAGPHTRYRMGSIAKVLTATA HHCCCHHCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AMQMAERGEIDIDRPLADYLPGFSVRSRFDDRTPITPRNIMHHHSGLPANYLKGMMGGDP HHHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCC PPFTTLVEAVREEYVAYPPEFIFGYSNLAVTLLGAALEQRAGLPFADHMAKSLIEPLGMT CCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC ETRFESNPALRVYDARGQIEALPLRDLPSGGLVSSVADMSRFMRMVFAGGRSGNTQLLRP HHHCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECH ETLHEMLRAQNEHIALDLGFRVGLGWLLSGIEIRNAGLVASHGGTLFDSHSMMVVLPEHK HHHHHHHHCCCCEEEEEECHHHHHHHHHCCCEEECCCEEEECCCEEEECCCEEEEECCCC LGVIVASNSGTSQGTVKKIATEALIHALEAKAGIRQPEAAAIAQPEVRLAPEQLASYSAW EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEECHHHHHHHHHH YDSMVGLIRVKPRAGALDADVMGHTLQLRAQPGGQFGLRYKLFGLIPVQVGAFDGVRISA HHHCEEEEEECCCCCCCCHHHCCCEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEE AAIGGHEVLVGHFGDDTMLVGEKLAPRPIPRTMLDYVGEYEIVGKPPGLAPDRLALRVED EEECCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEC GMLIGECSFSELPGFMLRIALNPISPTEAVISGLGTGKGETIRILPGEGRRLLFSGLELR CEEEEECCHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEECCHHHH QKTN HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA