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The map label for this gene is dppC [H]

Identifier: 119896511

GI number: 119896511

Start: 242415

End: 243290

Strand: Direct

Name: dppC [H]

Synonym: azo0220

Alternate gene names: 119896511

Gene position: 242415-243290 (Clockwise)

Preceding gene: 119896510

Following gene: 119896512

Centisome position: 5.54

GC content: 72.37

Gene sequence:

>876_bases
ATGAGCGACCAGCCCATGCCCGCTTCCTCCGCCCCCGCGCCGGCGCTGCCGGCCGAGCCGCCCCGGCGCCGGCTGCCACG
GCTGCCGCTGCCGGGCCTGCTCGGCCTGGCGGTGATCCTGTTCTGGCTGGCCACCGCCCTCTTCGGCCCCTGGCTGCTGG
CGCCCGAAGCGAATGAGCCCGGCGTCGACGTGGTATTCGGCCGCCTCAGCGCCGCCCATCCGCTGGGCACCGACTACCTC
GGCCGCGACATGCTCGCCCGCCTGGTGCTGGGCGCCGGCTACACCGTTGGCGTGGCCATCGTCGCCACCCTGCTGGCCAG
CGCCGGCGGCACTGCGCTGGCGCTGCTGGCGGCGGTGCGCGGCGGCTGGACGGACGGCGCCCTGAGCCGCCTGATGGACA
CGCTGATCTCCATTCCCAGCAAGCTCTTCGCGCTCATCATGGTGGCCGCCTTCGGCTCCTCGGTGACGCTGCTGGCGCTC
ACCGCGGCGCTGATCTACGTGCCCGGCGTGTTCCGTATCGCCCGCTCGCTGGCGGTGAACATCAACGCCATGGACTACGT
GGCGGTGGCGCGCAGCCGCGGTGAAGGCGACCTCTACATCATGCGCCACGAGATCCTGCCCAACATGCTCGGCCCCATGC
TGGCCGACCTCGGCCTGCGCTTCGTCTATGTGGTGCTGCTGCTCGCCGGCCTGTCCTTCCTCGGCCTCGGCGTGCAGCCG
CCGGAGGCGGACTGGGGCTCGCTGGTGCGGGAGAACCTGGGCGGCCTGCCGGAAGGCGCGCCGGCGGTGATCGTGCCGGC
GCTCGCCATCGCCAGCCTCACCATCGCGGTCAACCTCTTCATCGACAACCTGCCGGGGCGCGCCAATCGTGAATGA

Upstream 100 bases:

>100_bases
TGGTGCAGACCTGCGCCATGCTGTTCTGTGCTGCCTACCTGCTGTTGGTCACCGTGGCCGACGTGCTCGGCATCGTCTCC
AACCCCAAGCTGCGCCACCG

Downstream 100 bases:

>100_bases
TCGCGCCGACAAGGAGATCGCCATGCGCGCAGACAAGCCGGGTGCCGCGGTCGCGGTGCGCGGCCTGCGCATCGCCGCCG
GCGGCAAGCCCATCGTGCAC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSDQPMPASSAPAPALPAEPPRRRLPRLPLPGLLGLAVILFWLATALFGPWLLAPEANEPGVDVVFGRLSAAHPLGTDYL
GRDMLARLVLGAGYTVGVAIVATLLASAGGTALALLAAVRGGWTDGALSRLMDTLISIPSKLFALIMVAAFGSSVTLLAL
TAALIYVPGVFRIARSLAVNINAMDYVAVARSRGEGDLYIMRHEILPNMLGPMLADLGLRFVYVVLLLAGLSFLGLGVQP
PEADWGSLVRENLGGLPEGAPAVIVPALAIASLTIAVNLFIDNLPGRANRE

Sequences:

>Translated_291_residues
MSDQPMPASSAPAPALPAEPPRRRLPRLPLPGLLGLAVILFWLATALFGPWLLAPEANEPGVDVVFGRLSAAHPLGTDYL
GRDMLARLVLGAGYTVGVAIVATLLASAGGTALALLAAVRGGWTDGALSRLMDTLISIPSKLFALIMVAAFGSSVTLLAL
TAALIYVPGVFRIARSLAVNINAMDYVAVARSRGEGDLYIMRHEILPNMLGPMLADLGLRFVYVVLLLAGLSFLGLGVQP
PEADWGSLVRENLGGLPEGAPAVIVPALAIASLTIAVNLFIDNLPGRANRE
>Mature_290_residues
SDQPMPASSAPAPALPAEPPRRRLPRLPLPGLLGLAVILFWLATALFGPWLLAPEANEPGVDVVFGRLSAAHPLGTDYLG
RDMLARLVLGAGYTVGVAIVATLLASAGGTALALLAAVRGGWTDGALSRLMDTLISIPSKLFALIMVAAFGSSVTLLALT
AALIYVPGVFRIARSLAVNINAMDYVAVARSRGEGDLYIMRHEILPNMLGPMLADLGLRFVYVVLLLAGLSFLGLGVQPP
EADWGSLVRENLGGLPEGAPAVIVPALAIASLTIAVNLFIDNLPGRANRE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=280, Percent_Identity=30.3571428571429, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1787760, Length=250, Percent_Identity=31.6, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789964, Length=234, Percent_Identity=36.7521367521368, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787549, Length=263, Percent_Identity=32.6996197718631, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789889, Length=219, Percent_Identity=29.2237442922374, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787498, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30336; Mature: 30205

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQPMPASSAPAPALPAEPPRRRLPRLPLPGLLGLAVILFWLATALFGPWLLAPEANEP
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
GVDVVFGRLSAAHPLGTDYLGRDMLARLVLGAGYTVGVAIVATLLASAGGTALALLAAVR
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
GGWTDGALSRLMDTLISIPSKLFALIMVAAFGSSVTLLALTAALIYVPGVFRIARSLAVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
INAMDYVAVARSRGEGDLYIMRHEILPNMLGPMLADLGLRFVYVVLLLAGLSFLGLGVQP
CCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PEADWGSLVRENLGGLPEGAPAVIVPALAIASLTIAVNLFIDNLPGRANRE
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDQPMPASSAPAPALPAEPPRRRLPRLPLPGLLGLAVILFWLATALFGPWLLAPEANEP
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
GVDVVFGRLSAAHPLGTDYLGRDMLARLVLGAGYTVGVAIVATLLASAGGTALALLAAVR
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
GGWTDGALSRLMDTLISIPSKLFALIMVAAFGSSVTLLALTAALIYVPGVFRIARSLAVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
INAMDYVAVARSRGEGDLYIMRHEILPNMLGPMLADLGLRFVYVVLLLAGLSFLGLGVQP
CCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PEADWGSLVRENLGGLPEGAPAVIVPALAIASLTIAVNLFIDNLPGRANRE
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]