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The map label for this gene is gstR1 [C]

Identifier: 119896404

GI number: 119896404

Start: 129841

End: 130737

Strand: Reverse

Name: gstR1 [C]

Synonym: azo0112

Alternate gene names: 119896404

Gene position: 130737-129841 (Counterclockwise)

Preceding gene: 119896407

Following gene: 119896402

Centisome position: 2.99

GC content: 71.79

Gene sequence:

>897_bases
ATGGACAAGCTCAAGGCGATGCAGATCGCGGTGGCGATCGCCGACAGCGGCAGCCTGACCGCGGCCGCCGACAGCCTCGA
CATCTCGCTGCCGGTAGTGGTGCGCACGCTGGCCGCGCTCGAGGCCGGACTGGGGGTGCGGCTGTTCAACCGCAGCACCC
GCCGGCTGTCGCTGACCGACGAAGGCCGCGACTACCTCGCGCGCTGCCGCCAGATCCTCGCCGACATCCATGACGCGGAA
GCCGCGCTGGCCAGCGACGCGGTGGTGCCGAGCGGGCGGGTGGTGGTGACCGCGCCGGTGATGTTCGGCCAGCAGCACGT
CGCGCCGGCGCTCACCCGCTTCGTCCAGCACTACGGACAGATGCGGGTGGAGCTGCGCCTGCACGACCGGGTGGTGAACC
TGCTCGAAGAACACATCGACGTGGCGGTGCGCATCGGCGCGATCGAGGACCAGTCGCTGGTCGCCCATGCGCTGGGCACC
CTGCGCCGCATCGTCGTCGCCGCGCCCGCCTACCTCGCCGCCCGCGGCACGCCGCAGCATCCGCGCGAACTCGCGGCGCA
CGAGTGCATCGTGTTCAACGGCAACAGCGCCGGCTGGTGGCGCTTCATCGATGACGGCCACGAATTCGGCATGACGGTGG
ACGGCCGCCTCACCTACAACCATGTGGCCCCGGCGCTGGACGCCTGCCGCGCCGGCATGGGACTGGGCACCTTCATCGCC
TACCAGATCGCCGACGACCTGCACGCCGGCCGCCTGCTGCCGGTGCTGGAAGCCTTCGAGCTGCCGCCGCGGCCGGTGCA
CGTGGCCTTTCCGCACGCCCGCTTGCTGCCGACCCGCACGCGGGTGTTGGTGGACTGGCTGCGCCGCGACCTCGGCGAGC
AGCTCGCCGCGCTGTAG

Upstream 100 bases:

>100_bases
GTTTCCTTCGGAATGGGTGAGTCCATTGTCAGTAATCCGTACTGCGCAATAAATGATGGCCACGGATTAGACTCCTTCCA
TTTCCGCAGCAATCAAACCC

Downstream 100 bases:

>100_bases
GCCGGGTGCGCGAAGCTCACTCCGGCACCAGCACCGCCGCCCCTTCGATCCGCCCCAGCCGCAGCGCGTCCAGCGCTTCG
TTGGCCTGGTCCAGCCGATA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MDKLKAMQIAVAIADSGSLTAAADSLDISLPVVVRTLAALEAGLGVRLFNRSTRRLSLTDEGRDYLARCRQILADIHDAE
AALASDAVVPSGRVVVTAPVMFGQQHVAPALTRFVQHYGQMRVELRLHDRVVNLLEEHIDVAVRIGAIEDQSLVAHALGT
LRRIVVAAPAYLAARGTPQHPRELAAHECIVFNGNSAGWWRFIDDGHEFGMTVDGRLTYNHVAPALDACRAGMGLGTFIA
YQIADDLHAGRLLPVLEAFELPPRPVHVAFPHARLLPTRTRVLVDWLRRDLGEQLAAL

Sequences:

>Translated_298_residues
MDKLKAMQIAVAIADSGSLTAAADSLDISLPVVVRTLAALEAGLGVRLFNRSTRRLSLTDEGRDYLARCRQILADIHDAE
AALASDAVVPSGRVVVTAPVMFGQQHVAPALTRFVQHYGQMRVELRLHDRVVNLLEEHIDVAVRIGAIEDQSLVAHALGT
LRRIVVAAPAYLAARGTPQHPRELAAHECIVFNGNSAGWWRFIDDGHEFGMTVDGRLTYNHVAPALDACRAGMGLGTFIA
YQIADDLHAGRLLPVLEAFELPPRPVHVAFPHARLLPTRTRVLVDWLRRDLGEQLAAL
>Mature_298_residues
MDKLKAMQIAVAIADSGSLTAAADSLDISLPVVVRTLAALEAGLGVRLFNRSTRRLSLTDEGRDYLARCRQILADIHDAE
AALASDAVVPSGRVVVTAPVMFGQQHVAPALTRFVQHYGQMRVELRLHDRVVNLLEEHIDVAVRIGAIEDQSLVAHALGT
LRRIVVAAPAYLAARGTPQHPRELAAHECIVFNGNSAGWWRFIDDGHEFGMTVDGRLTYNHVAPALDACRAGMGLGTFIA
YQIADDLHAGRLLPVLEAFELPPRPVHVAFPHARLLPTRTRVLVDWLRRDLGEQLAAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI145693193, Length=309, Percent_Identity=29.126213592233, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1789639, Length=288, Percent_Identity=27.7777777777778, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787128, Length=280, Percent_Identity=28.9285714285714, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI1786401, Length=292, Percent_Identity=29.7945205479452, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789440, Length=257, Percent_Identity=29.1828793774319, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI87081978, Length=294, Percent_Identity=28.9115646258503, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1787589, Length=283, Percent_Identity=26.5017667844523, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1790011, Length=313, Percent_Identity=25.5591054313099, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789173, Length=250, Percent_Identity=25.2, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788481, Length=289, Percent_Identity=25.2595155709343, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32518; Mature: 32518

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLKAMQIAVAIADSGSLTAAADSLDISLPVVVRTLAALEAGLGVRLFNRSTRRLSLTD
CCCHHEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEECC
EGRDYLARCRQILADIHDAEAALASDAVVPSGRVVVTAPVMFGQQHVAPALTRFVQHYGQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHHHHHHCC
MRVELRLHDRVVNLLEEHIDVAVRIGAIEDQSLVAHALGTLRRIVVAAPAYLAARGTPQH
EEEEEHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
PRELAAHECIVFNGNSAGWWRFIDDGHEFGMTVDGRLTYNHVAPALDACRAGMGLGTFIA
HHHHHHCEEEEEECCCCCEEEEECCCCCCCEEECCEEEHHHHHHHHHHHHCCCCHHHHHH
YQIADDLHAGRLLPVLEAFELPPRPVHVAFPHARLLPTRTRVLVDWLRRDLGEQLAAL
HHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKLKAMQIAVAIADSGSLTAAADSLDISLPVVVRTLAALEAGLGVRLFNRSTRRLSLTD
CCCHHEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEECC
EGRDYLARCRQILADIHDAEAALASDAVVPSGRVVVTAPVMFGQQHVAPALTRFVQHYGQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHHHHHHCC
MRVELRLHDRVVNLLEEHIDVAVRIGAIEDQSLVAHALGTLRRIVVAAPAYLAARGTPQH
EEEEEHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
PRELAAHECIVFNGNSAGWWRFIDDGHEFGMTVDGRLTYNHVAPALDACRAGMGLGTFIA
HHHHHHCEEEEEECCCCCEEEEECCCCCCCEEECCEEEHHHHHHHHHHHHCCCCHHHHHH
YQIADDLHAGRLLPVLEAFELPPRPVHVAFPHARLLPTRTRVLVDWLRRDLGEQLAAL
HHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8635745; 7542800 [H]