| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119896396
Identifier: 119896396
GI number: 119896396
Start: 122689
End: 123570
Strand: Direct
Name: 119896396
Synonym: azo0104
Alternate gene names: NA
Gene position: 122689-123570 (Clockwise)
Preceding gene: 119896395
Following gene: 119896397
Centisome position: 2.8
GC content: 68.93
Gene sequence:
>882_bases ATGCCCGTTTCGCGCCGTCGCGTCCTTGGCCTCGCTACCGCCCTGTGTGCGGCCGCATCGCTGCAATCGTCCGTGCTGCG CGCGGCCACTCCCGAACCGGCACGTCTGTCGGAACGCTGGGACGAAAAGCGCGCGGCGCGCCTGCTGGACCGGGCGGTCA AGCACATCGAAGCGAAGGGCGAAGCCGGCGTCGCCGACTTCAGCCGCCAGGGGCCCTTCGTCGACCGCGACCTCTATGTG TATGCGCTGGGCAGCGACGGGCGCTTTCTCGCCAGCGGCGGCTCCTCGGCCGCACTGATCGGGCAGAACGTTGCCGCCAC CACTGACGCCGCGGGCAAGCCCTTCTTCCGCGAGATGCTGGATACGGCGGCGAGCCGTGGCGAAGGCCGCATCGAGTACC GCTGGCTGAACCCCGCGGACCAGCGCGAGGAACCCAAGGTCACGCTGTTCCGCAAGGTGGGCGGAATCATCGTCGCGGTG GGCTTCTATACCCCGCGCGCCACCCCGGCGCAGGCGCGTGCGCTGCTGGATCAGGCGGCGGCCGCGCTGGCCCGCGACAG CGGCGCCGCGCTGGGCGAATTCCAGCAGGTGGGCGGCCGCTTCATCCAGGACGACCTGTATGTGTTCGTCGTCGACATGG GCGACGGGCGCTTTCTCGCCCACGGCGCCACCCCCGCGCTGGTGGGCCGCGACGCGCGCGAACTGCGCGATCCCAAGGGC AAGGCACTGATCACCGACATGATCAATGTCGCGCGCAAGAAGGGTGAAGGCGAACTCGACTACGCCTGGCAAAACCCGGT GACGGCCAAGCTGGAAAGCAAGCACACGTATTTCCGCGTGGTCGACGGCAAGCTGCTCGGTGTAGGCTACTACACCCGCT GA
Upstream 100 bases:
>100_bases GCGCCTGAGGCTGCAGGGCCGCGGATGCCGCGGCGCTCGACAAGCCGGGGAAAAGTTTCTATCTTTTTGTACATTCGTTC AAAAAGACAGGAGACACACC
Downstream 100 bases:
>100_bases CCGGTGCCCCAGAGCCCGGCGGCGTCATCACCCTGACATAGAGGAGATTTACCCCATGGCTACCGTCACCCTGGGCGGCA ACCCGATTTCCATCGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cache Sensor Protein; Methyl-Accepting Chemotaxis Protein; Cache Domain-Contain Protein; Cache Domain Family; Cache Type 2 Domain Protein
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPVSRRRVLGLATALCAAASLQSSVLRAATPEPARLSERWDEKRAARLLDRAVKHIEAKGEAGVADFSRQGPFVDRDLYV YALGSDGRFLASGGSSAALIGQNVAATTDAAGKPFFREMLDTAASRGEGRIEYRWLNPADQREEPKVTLFRKVGGIIVAV GFYTPRATPAQARALLDQAAAALARDSGAALGEFQQVGGRFIQDDLYVFVVDMGDGRFLAHGATPALVGRDARELRDPKG KALITDMINVARKKGEGELDYAWQNPVTAKLESKHTYFRVVDGKLLGVGYYTR
Sequences:
>Translated_293_residues MPVSRRRVLGLATALCAAASLQSSVLRAATPEPARLSERWDEKRAARLLDRAVKHIEAKGEAGVADFSRQGPFVDRDLYV YALGSDGRFLASGGSSAALIGQNVAATTDAAGKPFFREMLDTAASRGEGRIEYRWLNPADQREEPKVTLFRKVGGIIVAV GFYTPRATPAQARALLDQAAAALARDSGAALGEFQQVGGRFIQDDLYVFVVDMGDGRFLAHGATPALVGRDARELRDPKG KALITDMINVARKKGEGELDYAWQNPVTAKLESKHTYFRVVDGKLLGVGYYTR >Mature_292_residues PVSRRRVLGLATALCAAASLQSSVLRAATPEPARLSERWDEKRAARLLDRAVKHIEAKGEAGVADFSRQGPFVDRDLYVY ALGSDGRFLASGGSSAALIGQNVAATTDAAGKPFFREMLDTAASRGEGRIEYRWLNPADQREEPKVTLFRKVGGIIVAVG FYTPRATPAQARALLDQAAAALARDSGAALGEFQQVGGRFIQDDLYVFVVDMGDGRFLAHGATPALVGRDARELRDPKGK ALITDMINVARKKGEGELDYAWQNPVTAKLESKHTYFRVVDGKLLGVGYYTR
Specific function: Unknown
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31742; Mature: 31611
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSRRRVLGLATALCAAASLQSSVLRAATPEPARLSERWDEKRAARLLDRAVKHIEAKG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC EAGVADFSRQGPFVDRDLYVYALGSDGRFLASGGSSAALIGQNVAATTDAAGKPFFREML CCCCCHHHCCCCCCCCCEEEEEECCCCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHH DTAASRGEGRIEYRWLNPADQREEPKVTLFRKVGGIIVAVGFYTPRATPAQARALLDQAA HHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHH AALARDSGAALGEFQQVGGRFIQDDLYVFVVDMGDGRFLAHGATPALVGRDARELRDPKG HHHHCCCCCHHHHHHHHCCEEECCCEEEEEEECCCCEEEECCCCHHHHCCCHHHHCCCCC KALITDMINVARKKGEGELDYAWQNPVTAKLESKHTYFRVVDGKLLGVGYYTR CCHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCEEEEEECCEEEECCCCCC >Mature Secondary Structure PVSRRRVLGLATALCAAASLQSSVLRAATPEPARLSERWDEKRAARLLDRAVKHIEAKG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC EAGVADFSRQGPFVDRDLYVYALGSDGRFLASGGSSAALIGQNVAATTDAAGKPFFREML CCCCCHHHCCCCCCCCCEEEEEECCCCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHH DTAASRGEGRIEYRWLNPADQREEPKVTLFRKVGGIIVAVGFYTPRATPAQARALLDQAA HHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHH AALARDSGAALGEFQQVGGRFIQDDLYVFVVDMGDGRFLAHGATPALVGRDARELRDPKG HHHHCCCCCHHHHHHHHCCEEECCCEEEEEEECCCCEEEECCCCHHHHCCCHHHHCCCCC KALITDMINVARKKGEGELDYAWQNPVTAKLESKHTYFRVVDGKLLGVGYYTR CCHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCEEEEEECCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA