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The map label for this gene is ytrF [H]

Identifier: 119896348

GI number: 119896348

Start: 62972

End: 64369

Strand: Direct

Name: ytrF [H]

Synonym: azo0056

Alternate gene names: 119896348

Gene position: 62972-64369 (Clockwise)

Preceding gene: 119896347

Following gene: 119896349

Centisome position: 1.44

GC content: 74.11

Gene sequence:

>1398_bases
ATGAGCACGCTCTTCCTCGCCTGGCGCAACGTGCTGCGCAACCGCCGCCGCAGCGCGATCACGCTCGCCACCATCGCGGT
CGCGGCAATGGCCGTCGTGATGCTCGGTGGCTACGTCGCCGCCACCATCAAGGGGCTGGAAACGCTCACCGTGCGTCAGG
TGGGCCACTTGCAGGTCATGAGCCGCGGCTACCTCGAATTCGGCCGCGCCAACCCCGCCCGCCACGCCCTGCGCGACTAC
GCCCCGCTCGCCGGGCGCCTGCGCGCCGATCCGCAACTGGCGCCGCTGCTGCACGTGGTGACGCCGACGCTGCAGGTGCA
GGGCGTCGCCGGCCACTTCGCCAGCGCCAGCTCCAGCACCTTCAGCGCCGCCGGCTGGGTGGCGGACGATCGCGCCCGCA
TGCTGGCGTGGGACGGCCTGCGGCTGGGCACGCCGCCGCTGCCGACCGCGCTGCGCGCCGACCGCCCGGACGACGGCGTG
ATCGGCGTCGGCCTCGCCCAGTTGCTCGACCTGTGCGACGCGCTGGCCATTGCCGACTGCGTGCGCGCACCGGCAGCGGT
GCCGGCGGCCGCCGCCGCGATCGACGCCGACCTCGCCGCCCTCAGCCGGCAAGCGCGCGAAGCGGGGCCCGCCGCACCCG
CCGCCGGCGCGGTGGTGGTGGATCTGCTCGCCGCCGGTGCCAGCGGCGCGCCCAACATCGTGCGCATGACGGCGACACGC
GCCGAGCGCCAGGGCGTGCGCGAACTCGACATGGTGCACGTCGGCCTGCCGCTGGCGCTGGCGCAGCGGCTGGTGTTCGG
CACCGGCGCGGCCGGCGCCTCGGCGCTGGTGCTGCAGCTGGAAGACAGCGCCCGCCTGGACGAGGCGCGGGCGCGGGTCG
CGGCGGTGGTGCACGACTACGCCGGCGACACGCTGGAGGTACGGACCTTTGCCGAGGTGTCGCCGAGCTACAACCAGGTC
GTCCGCATGTTCCGCACGCTGTTCGGCTTCGTCTCGCTGCTGATGGCGGTGGTGACGCTGTTCGCGGTCGCCAACACGGT
GAACATGGCGGTCAGCGAACGCACCGGCGAAATCGGCTCGCTGCGCGCGATCGGCCTGCCGCGGGCGCGCATCCGCCGCA
TGTTCGTGCTGGAAGGCGGGCTGGTCGGCGCCTTCGGCGCGGTGCTGGGGGTGGCGCTGGCGGTCGTGCTGGCGGGCGGC
CTGATCAACCACGCCGGCTTCAGCTGGACGCCGCCCGGCAACATCACCCCGGTGCCGATCACCATCGACGTGCAGGGCAG
CGCGCGGCTGTGCCTCGGCACCGTGCTGGCGATGACCCTGATCGCCTGCATCTCGTCGTGGTGGCCGGCCCGCCGCGCCG
CCCGTCTCGAAATCGTGGAGGCCCTGCGCCATGCGTGA

Upstream 100 bases:

>100_bases
TCTCCTCCCACGACGCGGCGGTGCTCGATGCCGCCGACCTGCGCGTGACCCTGGTCGACGGCCGCGTCGCCCGGCTGGAA
ACCGGGGCGGAGGTGGCGGC

Downstream 100 bases:

>100_bases
CGTCCTCTTCCCCCGCGGCGGGCGCCGCCGCCTGCTGCTCGCGGCCTGCTGCCTCGCCGCCGGCGCCGCGCTGCCGGGCT
GGGTGCGCGCCGACGACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MSTLFLAWRNVLRNRRRSAITLATIAVAAMAVVMLGGYVAATIKGLETLTVRQVGHLQVMSRGYLEFGRANPARHALRDY
APLAGRLRADPQLAPLLHVVTPTLQVQGVAGHFASASSSTFSAAGWVADDRARMLAWDGLRLGTPPLPTALRADRPDDGV
IGVGLAQLLDLCDALAIADCVRAPAAVPAAAAAIDADLAALSRQAREAGPAAPAAGAVVVDLLAAGASGAPNIVRMTATR
AERQGVRELDMVHVGLPLALAQRLVFGTGAAGASALVLQLEDSARLDEARARVAAVVHDYAGDTLEVRTFAEVSPSYNQV
VRMFRTLFGFVSLLMAVVTLFAVANTVNMAVSERTGEIGSLRAIGLPRARIRRMFVLEGGLVGAFGAVLGVALAVVLAGG
LINHAGFSWTPPGNITPVPITIDVQGSARLCLGTVLAMTLIACISSWWPARRAARLEIVEALRHA

Sequences:

>Translated_465_residues
MSTLFLAWRNVLRNRRRSAITLATIAVAAMAVVMLGGYVAATIKGLETLTVRQVGHLQVMSRGYLEFGRANPARHALRDY
APLAGRLRADPQLAPLLHVVTPTLQVQGVAGHFASASSSTFSAAGWVADDRARMLAWDGLRLGTPPLPTALRADRPDDGV
IGVGLAQLLDLCDALAIADCVRAPAAVPAAAAAIDADLAALSRQAREAGPAAPAAGAVVVDLLAAGASGAPNIVRMTATR
AERQGVRELDMVHVGLPLALAQRLVFGTGAAGASALVLQLEDSARLDEARARVAAVVHDYAGDTLEVRTFAEVSPSYNQV
VRMFRTLFGFVSLLMAVVTLFAVANTVNMAVSERTGEIGSLRAIGLPRARIRRMFVLEGGLVGAFGAVLGVALAVVLAGG
LINHAGFSWTPPGNITPVPITIDVQGSARLCLGTVLAMTLIACISSWWPARRAARLEIVEALRHA
>Mature_464_residues
STLFLAWRNVLRNRRRSAITLATIAVAAMAVVMLGGYVAATIKGLETLTVRQVGHLQVMSRGYLEFGRANPARHALRDYA
PLAGRLRADPQLAPLLHVVTPTLQVQGVAGHFASASSSTFSAAGWVADDRARMLAWDGLRLGTPPLPTALRADRPDDGVI
GVGLAQLLDLCDALAIADCVRAPAAVPAAAAAIDADLAALSRQAREAGPAAPAAGAVVVDLLAAGASGAPNIVRMTATRA
ERQGVRELDMVHVGLPLALAQRLVFGTGAAGASALVLQLEDSARLDEARARVAAVVHDYAGDTLEVRTFAEVSPSYNQVV
RMFRTLFGFVSLLMAVVTLFAVANTVNMAVSERTGEIGSLRAIGLPRARIRRMFVLEGGLVGAFGAVLGVALAVVLAGGL
INHAGFSWTPPGNITPVPITIDVQGSARLCLGTVLAMTLIACISSWWPARRAARLEIVEALRHA

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential). Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 48614; Mature: 48483

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLFLAWRNVLRNRRRSAITLATIAVAAMAVVMLGGYVAATIKGLETLTVRQVGHLQVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGYLEFGRANPARHALRDYAPLAGRLRADPQLAPLLHVVTPTLQVQGVAGHFASASSST
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECHHHHCCCCCCC
FSAAGWVADDRARMLAWDGLRLGTPPLPTALRADRPDDGVIGVGLAQLLDLCDALAIADC
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
VRAPAAVPAAAAAIDADLAALSRQAREAGPAAPAAGAVVVDLLAAGASGAPNIVRMTATR
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHH
AERQGVRELDMVHVGLPLALAQRLVFGTGAAGASALVLQLEDSARLDEARARVAAVVHDY
HHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
AGDTLEVRTFAEVSPSYNQVVRMFRTLFGFVSLLMAVVTLFAVANTVNMAVSERTGEIGS
CCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LRAIGLPRARIRRMFVLEGGLVGAFGAVLGVALAVVLAGGLINHAGFSWTPPGNITPVPI
EEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
TIDVQGSARLCLGTVLAMTLIACISSWWPARRAARLEIVEALRHA
EEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STLFLAWRNVLRNRRRSAITLATIAVAAMAVVMLGGYVAATIKGLETLTVRQVGHLQVM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGYLEFGRANPARHALRDYAPLAGRLRADPQLAPLLHVVTPTLQVQGVAGHFASASSST
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECHHHHCCCCCCC
FSAAGWVADDRARMLAWDGLRLGTPPLPTALRADRPDDGVIGVGLAQLLDLCDALAIADC
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
VRAPAAVPAAAAAIDADLAALSRQAREAGPAAPAAGAVVVDLLAAGASGAPNIVRMTATR
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHH
AERQGVRELDMVHVGLPLALAQRLVFGTGAAGASALVLQLEDSARLDEARARVAAVVHDY
HHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
AGDTLEVRTFAEVSPSYNQVVRMFRTLFGFVSLLMAVVTLFAVANTVNMAVSERTGEIGS
CCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LRAIGLPRARIRRMFVLEGGLVGAFGAVLGVALAVVLAGGLINHAGFSWTPPGNITPVPI
EEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
TIDVQGSARLCLGTVLAMTLIACISSWWPARRAARLEIVEALRHA
EEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]