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The map label for this gene is acbB [C]

Identifier: 119896318

GI number: 119896318

Start: 28631

End: 29569

Strand: Reverse

Name: acbB [C]

Synonym: azo0026

Alternate gene names: 119896318

Gene position: 29569-28631 (Counterclockwise)

Preceding gene: 119896320

Following gene: 119896312

Centisome position: 0.68

GC content: 66.45

Gene sequence:

>939_bases
ATGAGAGTTCTGGTAACGGGCGGCGCCGGCTTCATCGGCTCCCATCTGTGCCGCCGCCTGCTGGCAGATGGCCACGAGGT
GCTGTCGGCGGACAATTATTTCACGGGCAGCCGGCGCAACATCCACGACCTGCTCGGCAATCCCGACTTCGAAGCGCTGC
GCCACGACATCACGTTTCCGCTGTATGTCGAGGTCGACCGCATCTACAACTTCGCCTGTCCGGCCTCACCCGTGCATTAC
CAGTACGATCCGGTGCAGACCACCAAGACCAGCGTGCATGGCGCGATCAACATGCTGGGGCTCGCCAAGCGCACCGGCGC
GCGCGTGCTGCAGGCCTCGACCTCCGAGGTGTATGGCGACCCGGAGGTCCATCCGCAGACCGAGGACTACTGGGGCCGGG
TCAATCCGATCGGGCCGCGCAGCTGCTACGACGAGGGCAAGCGCTGCGCGGAGACGCTGTTCTTCGACTATCACCGCCAG
CACCGGGTCGAGATCAAGGTGGTGCGCATTTTCAACACCTATGGTCCCGGCATGCAGCCGAACGACGGCCGGGTGATCAG
CAATTTCATCGTGCAGGCGCTGCGCGGCGAGGACATCACGCTCTACGGCGACGGTGCGCAGACGCGCTCGTTCTGCCATG
TGTCCGACCTGGTGGATGGCGTGGTGCGGATGATGGACAGCCCGGCCGGCTTCACCGGGCCGGTCAACCTGGGCAACCCG
ACCGAATACCGCATCGACGCGCTGGCCGAGCTGATCCTGCGGCTGTGCGGGTCGCGCTCGCGGCTGGTATTCCGCCCGCT
GCCGGAGGACGACCCGTGCCAGCGTCAGCCCGACATCACGCTGGCACGCGAGCGCTTGGCGTGGACGCCGCGGGTCGCGC
TGGAGGACGGCCTGCGCGACACCATCGATCACTTCCGCCGCCTGCTCGAAACGCAGTGA

Upstream 100 bases:

>100_bases
TGGCCGACGATCCGCGGCAGCGTCTCGCGGATGTGGTGCAGGCGGCCTTTGCTGGTGGTCACGAACGCAATCTGCTGCAT
TGGGGTATCCCGGGGGAATC

Downstream 100 bases:

>100_bases
GGCGGGCGCCGCTTACTCAACCGTGAAGGCGTCGCCGGTGGCGAAGAAGTTGCCGCCGGCGATGTAGTGGATGCTGCGCG
TACCGGCCTCGTCGAAATGC

Product: putative dTDP-glucose 4-6-dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRVLVTGGAGFIGSHLCRRLLADGHEVLSADNYFTGSRRNIHDLLGNPDFEALRHDITFPLYVEVDRIYNFACPASPVHY
QYDPVQTTKTSVHGAINMLGLAKRTGARVLQASTSEVYGDPEVHPQTEDYWGRVNPIGPRSCYDEGKRCAETLFFDYHRQ
HRVEIKVVRIFNTYGPGMQPNDGRVISNFIVQALRGEDITLYGDGAQTRSFCHVSDLVDGVVRMMDSPAGFTGPVNLGNP
TEYRIDALAELILRLCGSRSRLVFRPLPEDDPCQRQPDITLARERLAWTPRVALEDGLRDTIDHFRRLLETQ

Sequences:

>Translated_312_residues
MRVLVTGGAGFIGSHLCRRLLADGHEVLSADNYFTGSRRNIHDLLGNPDFEALRHDITFPLYVEVDRIYNFACPASPVHY
QYDPVQTTKTSVHGAINMLGLAKRTGARVLQASTSEVYGDPEVHPQTEDYWGRVNPIGPRSCYDEGKRCAETLFFDYHRQ
HRVEIKVVRIFNTYGPGMQPNDGRVISNFIVQALRGEDITLYGDGAQTRSFCHVSDLVDGVVRMMDSPAGFTGPVNLGNP
TEYRIDALAELILRLCGSRSRLVFRPLPEDDPCQRQPDITLARERLAWTPRVALEDGLRDTIDHFRRLLETQ
>Mature_312_residues
MRVLVTGGAGFIGSHLCRRLLADGHEVLSADNYFTGSRRNIHDLLGNPDFEALRHDITFPLYVEVDRIYNFACPASPVHY
QYDPVQTTKTSVHGAINMLGLAKRTGARVLQASTSEVYGDPEVHPQTEDYWGRVNPIGPRSCYDEGKRCAETLFFDYHRQ
HRVEIKVVRIFNTYGPGMQPNDGRVISNFIVQALRGEDITLYGDGAQTRSFCHVSDLVDGVVRMMDSPAGFTGPVNLGNP
TEYRIDALAELILRLCGSRSRLVFRPLPEDDPCQRQPDITLARERLAWTPRVALEDGLRDTIDHFRRLLETQ

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=311, Percent_Identity=58.5209003215434, Blast_Score=394, Evalue=1e-110,
Organism=Homo sapiens, GI7657641, Length=324, Percent_Identity=25.3086419753086, Blast_Score=96, Evalue=3e-20,
Organism=Escherichia coli, GI1788589, Length=342, Percent_Identity=26.0233918128655, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786974, Length=333, Percent_Identity=27.9279279279279, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788353, Length=338, Percent_Identity=24.2603550295858, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1788365, Length=331, Percent_Identity=23.8670694864048, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17539532, Length=306, Percent_Identity=57.1895424836601, Blast_Score=382, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI115532424, Length=332, Percent_Identity=25.6024096385542, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17568069, Length=334, Percent_Identity=25.1497005988024, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356223, Length=308, Percent_Identity=59.4155844155844, Blast_Score=390, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35173; Mature: 35173

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVTGGAGFIGSHLCRRLLADGHEVLSADNYFTGSRRNIHDLLGNPDFEALRHDITFP
CEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCE
LYVEVDRIYNFACPASPVHYQYDPVQTTKTSVHGAINMLGLAKRTGARVLQASTSEVYGD
EEEEEEHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PEVHPQTEDYWGRVNPIGPRSCYDEGKRCAETLFFDYHRQHRVEIKVVRIFNTYGPGMQP
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCC
NDGRVISNFIVQALRGEDITLYGDGAQTRSFCHVSDLVDGVVRMMDSPAGFTGPVNLGNP
CCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
TEYRIDALAELILRLCGSRSRLVFRPLPEDDPCQRQPDITLARERLAWTPRVALEDGLRD
CHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCHHH
TIDHFRRLLETQ
HHHHHHHHHCCC
>Mature Secondary Structure
MRVLVTGGAGFIGSHLCRRLLADGHEVLSADNYFTGSRRNIHDLLGNPDFEALRHDITFP
CEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCE
LYVEVDRIYNFACPASPVHYQYDPVQTTKTSVHGAINMLGLAKRTGARVLQASTSEVYGD
EEEEEEHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PEVHPQTEDYWGRVNPIGPRSCYDEGKRCAETLFFDYHRQHRVEIKVVRIFNTYGPGMQP
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCC
NDGRVISNFIVQALRGEDITLYGDGAQTRSFCHVSDLVDGVVRMMDSPAGFTGPVNLGNP
CCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
TEYRIDALAELILRLCGSRSRLVFRPLPEDDPCQRQPDITLARERLAWTPRVALEDGLRD
CHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCHHH
TIDHFRRLLETQ
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]