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The map label for this gene is yagQ [H]

Identifier: 119896315

GI number: 119896315

Start: 26175

End: 27197

Strand: Direct

Name: yagQ [H]

Synonym: azo0023

Alternate gene names: 119896315

Gene position: 26175-27197 (Clockwise)

Preceding gene: 119896314

Following gene: 119896316

Centisome position: 0.6

GC content: 73.41

Gene sequence:

>1023_bases
ATGGATAGCCTGGACCACGACGTCCTCACCCGCGCCCGCGACTGGCTTGCCGCCGGTCGCCGGGTGCTGCTCGCCACCGT
GGTGCGCACCTGGGGTTCGTCGCCGCGCCCGCCCGGTGCACTGCTGGCGCTGCGCGACGACGGCCGCGCGGTCGGCTCGG
TGTCGGGCGGCTGCATCGAGGACGATCTGATCGACCGCCTGCACCGCGACGGCCTGCCCGCCACGCCGCAACTGGTGAGC
TACGGCGTCGGCGCCGAAGAGGCGCGCCGCTTCGGCCTGCCCTGCGGCGGCACCATGGAGCTGGTGCTGGAACCGCTCGC
CGATCCGGCGCCGCTCGATGCCCTGCTCGCGCGGCTGGCTGCCGGCGAGCTGGTCGAACGCCGGCTCGGCATGGCCAGCG
GCCGCGCCACGCTGGCCGCCGCCCATCCCGAACAAGGCCTGGCCTACGACGGCCGCACGCTGACCAGCGTGTTCGGCCCG
CGCTACCGGCTGCTGCTGATCGGCGCCGGCCAACTCTCGGAAAGCCTCGCCCGCATCGCACTCGGGCTGGATTTCGCCGT
CACCGTGTGCGATCCGCGTGAGGAATACCACGAGGAATGGCGGGTGGCCGGCACCACGCTGACGCGCGACATGCCGGACG
ACGTGGTCATCGCGATGCGGCCGGACGCGCGCACCGCAGTGATCGCGCTGACCCACGACCCCAAGCTCGACGACCTCGCG
CTGATGGAAGCGCTGCGCTCGCCGGCCTTCTACGTCGCCGCGCTCGGCTCGCGCCGCAACAACGCCGCGCGTCGCGAGCG
GCTGCGCGAATTCGACCTCAGCGAAGCACAGGTCGCCACGCTGCGCGGTCCCGCCGGGCTCTACATCGGCAGCCGCACGC
CGGCCGAGATCGCCGTCTCCATCGCCGCCGAGCTGGTCGCGGTGAAGAACGGCGTGACCCCGGAACGGGTGCTGCCGGTG
GCCGAAGCCAAGGCCGCGCTCGAACTCGCCGCCGACACCCTGTCGAGCTGCGCCGCCCGTTGA

Upstream 100 bases:

>100_bases
GCGCTTGCCAACGCGCTCCACGCCGCCACCGGCAAGCGCATCCGTAGCCTGCCGATCGCCGAGCAGCTCAAGGCCTGAGC
GCGGCACGAGGAGATCCGCC

Downstream 100 bases:

>100_bases
TGCAGGGCATCCTGCTCGCCGCCGGCTACGGCCGCCGCTTCGACCCCGACGGCGTGCAGGACAAGCTGCTGGCGCCGCTG
GCCGACGGCCGCCCAGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MDSLDHDVLTRARDWLAAGRRVLLATVVRTWGSSPRPPGALLALRDDGRAVGSVSGGCIEDDLIDRLHRDGLPATPQLVS
YGVGAEEARRFGLPCGGTMELVLEPLADPAPLDALLARLAAGELVERRLGMASGRATLAAAHPEQGLAYDGRTLTSVFGP
RYRLLLIGAGQLSESLARIALGLDFAVTVCDPREEYHEEWRVAGTTLTRDMPDDVVIAMRPDARTAVIALTHDPKLDDLA
LMEALRSPAFYVAALGSRRNNAARRERLREFDLSEAQVATLRGPAGLYIGSRTPAEIAVSIAAELVAVKNGVTPERVLPV
AEAKAALELAADTLSSCAAR

Sequences:

>Translated_340_residues
MDSLDHDVLTRARDWLAAGRRVLLATVVRTWGSSPRPPGALLALRDDGRAVGSVSGGCIEDDLIDRLHRDGLPATPQLVS
YGVGAEEARRFGLPCGGTMELVLEPLADPAPLDALLARLAAGELVERRLGMASGRATLAAAHPEQGLAYDGRTLTSVFGP
RYRLLLIGAGQLSESLARIALGLDFAVTVCDPREEYHEEWRVAGTTLTRDMPDDVVIAMRPDARTAVIALTHDPKLDDLA
LMEALRSPAFYVAALGSRRNNAARRERLREFDLSEAQVATLRGPAGLYIGSRTPAEIAVSIAAELVAVKNGVTPERVLPV
AEAKAALELAADTLSSCAAR
>Mature_340_residues
MDSLDHDVLTRARDWLAAGRRVLLATVVRTWGSSPRPPGALLALRDDGRAVGSVSGGCIEDDLIDRLHRDGLPATPQLVS
YGVGAEEARRFGLPCGGTMELVLEPLADPAPLDALLARLAAGELVERRLGMASGRATLAAAHPEQGLAYDGRTLTSVFGP
RYRLLLIGAGQLSESLARIALGLDFAVTVCDPREEYHEEWRVAGTTLTRDMPDDVVIAMRPDARTAVIALTHDPKLDDLA
LMEALRSPAFYVAALGSRRNNAARRERLREFDLSEAQVATLRGPAGLYIGSRTPAEIAVSIAAELVAVKNGVTPERVLPV
AEAKAALELAADTLSSCAAR

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=316, Percent_Identity=28.4810126582279, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1789240, Length=291, Percent_Identity=27.8350515463918, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 36249; Mature: 36249

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLDHDVLTRARDWLAAGRRVLLATVVRTWGSSPRPPGALLALRDDGRAVGSVSGGCIE
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCCCC
DDLIDRLHRDGLPATPQLVSYGVGAEEARRFGLPCGGTMELVLEPLADPAPLDALLARLA
HHHHHHHHHCCCCCCHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
AGELVERRLGMASGRATLAAAHPEQGLAYDGRTLTSVFGPRYRLLLIGAGQLSESLARIA
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHH
LGLDFAVTVCDPREEYHEEWRVAGTTLTRDMPDDVVIAMRPDARTAVIALTHDPKLDDLA
HCCCEEEEEECCHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCEEEEEEECCCCCHHHH
LMEALRSPAFYVAALGSRRNNAARRERLREFDLSEAQVATLRGPAGLYIGSRTPAEIAVS
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHEEEECCCCEEEECCCCHHHHHHH
IAAELVAVKNGVTPERVLPVAEAKAALELAADTLSSCAAR
HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSLDHDVLTRARDWLAAGRRVLLATVVRTWGSSPRPPGALLALRDDGRAVGSVSGGCIE
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCCCC
DDLIDRLHRDGLPATPQLVSYGVGAEEARRFGLPCGGTMELVLEPLADPAPLDALLARLA
HHHHHHHHHCCCCCCHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
AGELVERRLGMASGRATLAAAHPEQGLAYDGRTLTSVFGPRYRLLLIGAGQLSESLARIA
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHH
LGLDFAVTVCDPREEYHEEWRVAGTTLTRDMPDDVVIAMRPDARTAVIALTHDPKLDDLA
HCCCEEEEEECCHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCEEEEEEECCCCCHHHH
LMEALRSPAFYVAALGSRRNNAARRERLREFDLSEAQVATLRGPAGLYIGSRTPAEIAVS
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHEEEECCCCEEEECCCCHHHHHHH
IAAELVAVKNGVTPERVLPVAEAKAALELAADTLSSCAAR
HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]