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The map label for this gene is ssuC [C]

Identifier: 119871463

GI number: 119871463

Start: 5674257

End: 5675048

Strand: Direct

Name: ssuC [C]

Synonym: Mkms_5439

Alternate gene names: 119871463

Gene position: 5674257-5675048 (Clockwise)

Preceding gene: 119871462

Following gene: 119871464

Centisome position: 98.9

GC content: 66.41

Gene sequence:

>792_bases
ATGAGTACCTTCATGGTGGCGGCGTCCACCGGTCGCGGCCGCATCGCACTCGGCGTCCTGGGGGCGGTCGGCGCCCTGAC
GGCCTGGTTCCTGGTCTCCGCCAACAGCGGCAACGCCTACTTCCCGCCTCTCTCGGCGGTGCTCGAGCAGGCGGCGGAGT
ACTGGTCGACCCCGGAGGGGCTGGCCAACATCCGTGCCAGTCTGACAACACTGAGCGCGGGCCTGGCGATCGCGGTAGTC
GTCGGTGTCGCAGCGGGATTGGTGATCGGGCAACTTCCGATCGTCGAAAAGACGGTGTCGCCGACGCTGGAGTTCGCCCG
AGCGATCCCCAGCACCGCGCTCATCCCCTTTGCGATGATGCTGTTCGGCGTGAGCCCCGAGATGAAGATCTTCCTCATCG
CGCTGGGCTGTGTGTGGCCGGTTCTGCTCAGTACCGCCGACGGCGCGCGCCGGCTCGACTCGACGATGATCGCCTCGGTA
CGCGCGTTCAACATCACCGGCCTGCAGCGTCAGTGGTACGTGGTCCTGCCGGCCGTGCTACCCCGGGTCCTCGTCGGCGT
GCGGATCGCGATCCCGCTCAGCCTCATCCTGATGGTGACGAGCGAGATGGTCGGCGCACGAACGGGATTGGGATTCGTGA
TCACCCAGGCACAAGCGACGTTCCAGCTGTTGACGATGTGGTCGGGGATCCTGGTGCTGGGAATCCTCGGATTCCTCATG
ACGTTCCTCTACGCCCTGGCCGAACGCCGACTGTTGCGGTGGTGCGACCCGCGGCGTTCCGACACGCGCTGA

Upstream 100 bases:

>100_bases
CCTACATCGCGGTCAGCGGTCTGGCCGGGATCGTGCTCAACGCGCTGATGCGCCGGCTGGAGAACAGGGTGCTCTCGGCG
CAGGGACTCGGGGAGAGCCG

Downstream 100 bases:

>100_bases
ACGCGCCGTGTTCCACCGAATCGGTTCCGTTCCCGGACAATGTGAAAGGCAGTGATCGATGCTCGTCGTGTCAAGCCTCG
AGAAGACCTACCCCGTCAAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSTFMVAASTGRGRIALGVLGAVGALTAWFLVSANSGNAYFPPLSAVLEQAAEYWSTPEGLANIRASLTTLSAGLAIAVV
VGVAAGLVIGQLPIVEKTVSPTLEFARAIPSTALIPFAMMLFGVSPEMKIFLIALGCVWPVLLSTADGARRLDSTMIASV
RAFNITGLQRQWYVVLPAVLPRVLVGVRIAIPLSLILMVTSEMVGARTGLGFVITQAQATFQLLTMWSGILVLGILGFLM
TFLYALAERRLLRWCDPRRSDTR

Sequences:

>Translated_263_residues
MSTFMVAASTGRGRIALGVLGAVGALTAWFLVSANSGNAYFPPLSAVLEQAAEYWSTPEGLANIRASLTTLSAGLAIAVV
VGVAAGLVIGQLPIVEKTVSPTLEFARAIPSTALIPFAMMLFGVSPEMKIFLIALGCVWPVLLSTADGARRLDSTMIASV
RAFNITGLQRQWYVVLPAVLPRVLVGVRIAIPLSLILMVTSEMVGARTGLGFVITQAQATFQLLTMWSGILVLGILGFLM
TFLYALAERRLLRWCDPRRSDTR
>Mature_262_residues
STFMVAASTGRGRIALGVLGAVGALTAWFLVSANSGNAYFPPLSAVLEQAAEYWSTPEGLANIRASLTTLSAGLAIAVVV
GVAAGLVIGQLPIVEKTVSPTLEFARAIPSTALIPFAMMLFGVSPEMKIFLIALGCVWPVLLSTADGARRLDSTMIASVR
AFNITGLQRQWYVVLPAVLPRVLVGVRIAIPLSLILMVTSEMVGARTGLGFVITQAQATFQLLTMWSGILVLGILGFLMT
FLYALAERRLLRWCDPRRSDTR

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=159, Percent_Identity=31.4465408805031, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786564, Length=200, Percent_Identity=30, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28055; Mature: 27924

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFMVAASTGRGRIALGVLGAVGALTAWFLVSANSGNAYFPPLSAVLEQAAEYWSTPEG
CCCEEEEECCCCCEEHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCHH
LANIRASLTTLSAGLAIAVVVGVAAGLVIGQLPIVEKTVSPTLEFARAIPSTALIPFAMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
LFGVSPEMKIFLIALGCVWPVLLSTADGARRLDSTMIASVRAFNITGLQRQWYVVLPAVL
HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCHHEEHHHHHH
PRVLVGVRIAIPLSLILMVTSEMVGARTGLGFVITQAQATFQLLTMWSGILVLGILGFLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
TFLYALAERRLLRWCDPRRSDTR
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
STFMVAASTGRGRIALGVLGAVGALTAWFLVSANSGNAYFPPLSAVLEQAAEYWSTPEG
CCEEEEECCCCCEEHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCHH
LANIRASLTTLSAGLAIAVVVGVAAGLVIGQLPIVEKTVSPTLEFARAIPSTALIPFAMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
LFGVSPEMKIFLIALGCVWPVLLSTADGARRLDSTMIASVRAFNITGLQRQWYVVLPAVL
HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCHHEEHHHHHH
PRVLVGVRIAIPLSLILMVTSEMVGARTGLGFVITQAQATFQLLTMWSGILVLGILGFLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
TFLYALAERRLLRWCDPRRSDTR
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA