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The map label for this gene is ygbN [H]

Identifier: 119871442

GI number: 119871442

Start: 5650302

End: 5651735

Strand: Direct

Name: ygbN [H]

Synonym: Mkms_5418

Alternate gene names: 119871442

Gene position: 5650302-5651735 (Clockwise)

Preceding gene: 119871441

Following gene: 119871443

Centisome position: 98.48

GC content: 66.81

Gene sequence:

>1434_bases
GTGGAGGCCATTGATCCCGCATACGGGACCGCCACGCTCCTGCTCATCGCCGCGGGCGCCGTCGCGGTCCTGCTGTTCCT
GATCATCAAGGTGAAGCTCCACGCGTTCGTGGCGCTCGTACTGGTGAGCCTGCTGACGGCGCTGGCCGCCGGCATCCCCG
TCGCCGATGTCCCGAGCGCGTTGGCGTTCGGCTTCTCGAACACCCTCGGCTCGGTGGCGCTGCTCGTCGGGTTCGGCGTC
ATGATCGGCCGGCTCCTCGAAATCACCGGCGGTGCACAGGTTCTCGCCGACACCCTGATCGGCCGGTTCGGCGAGAAGCG
GGCACCGTTCGCACTCGGTGTGGCCGCGCTGCTGTTCGGTTTCCCGATCTTCTTCGACGCCGGTCTGGTCGTCTTCCTGC
CGATCATCATGACTGTCGCCCGGCGCTTCGGCGGCTCGCTGCTGCTGTACGCGTTCCCGGCCGCCGGCGCCTTCGCGGCC
ATGCACGCGTTGGTTCCCCCGCATCCCGGCCCGGTCGCGGCCGCCGAACTACTCGGCGCCAACATCGGTCTCACCCTGAT
CATCGGGGTTCCGGTCGCGGTCGCGTCGTGGTACGTCGGTGCGTTCCTGGTATCCCAGTTCATCGGGCGGCGAGTGCACG
TCGACATTCCCACCTCGTTGTTCGGTGAGATCAACGGGGGCCGCGACGCCGACGAATCCGCCCCATCCGCGGGCGGCGCC
GTCGGCACGGCCCGTACCGCCACCCGGACACCACCCGCGTTCATGACGGTGCTCGGTGTGTTGCTGCTGCCGTTCGTGTT
GATCTCGTTCAACACCGTGCTCGACACCCTGATGACGGCCGGTGTGATCGAGGAGGGCGCCACCTGGGCCGAGTATCTCA
AGCTGCTCGGAACCACCTCGATCGCGCTGTTGATCACGGTGATCGTGGCGACCCTGGCACTGGGGTTGCGGGGCAGGTCG
ATGGCCGATGTGAGCAACATCCTCGACAACGCGCTCGGCCCCATCTGCGCGATCATCCTCATCACCGGTGCCGGCGGGAT
GTTCGGTGGCGTGCTGCGGCTCAGCGGTATCGGCGATGCGCTGAGCAGCTCACTGTCGAATCTCGGTATCTCGCTGATCC
TTCAGGCGTTCCTCATCTCCACGCTGCTTCGGGTCGCCCAGGGTTCGGCCACCGTCGCGCTGACGACCACCGCCGGACTC
CTGAGCGCGGCGGTCGCCACGGCAGATCTGAGCAATGTCCAGCTCACGGCGTTGGTGATGGCCATCGCGGCGGGTGCGAC
AGTGCTCTCACACGTCAACGACTCCGGGTTCTGGTTGGTCAGTCGATTCTTCGGGATGGACGTGAAGACGACGCTCAAGA
CGTGGACGGTCATGGAGACGACGCTCGGGCTCAGCGCCTTCGTGCTCAGCCTCGGGTTGTGGGCCGTCGCGTGA

Upstream 100 bases:

>100_bases
TTCGATCATCGAAAGTTACGTCAACACAACGCATTCGCATGGAGCCGAGAAGGAGGACCGATGATTCGGGGCACTGACAT
CACGACGGTCGGGGGGTCTC

Downstream 100 bases:

>100_bases
GATGGTGGCGCTGATCGACAGCGTCCGGCGCGAACTGGCCGCCGCAGCGGATCCGGACCGTGCACCGGCGATGCAGGCGT
ACATGAAGTCGCAGATGCCC

Product: gluconate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MEAIDPAYGTATLLLIAAGAVAVLLFLIIKVKLHAFVALVLVSLLTALAAGIPVADVPSALAFGFSNTLGSVALLVGFGV
MIGRLLEITGGAQVLADTLIGRFGEKRAPFALGVAALLFGFPIFFDAGLVVFLPIIMTVARRFGGSLLLYAFPAAGAFAA
MHALVPPHPGPVAAAELLGANIGLTLIIGVPVAVASWYVGAFLVSQFIGRRVHVDIPTSLFGEINGGRDADESAPSAGGA
VGTARTATRTPPAFMTVLGVLLLPFVLISFNTVLDTLMTAGVIEEGATWAEYLKLLGTTSIALLITVIVATLALGLRGRS
MADVSNILDNALGPICAIILITGAGGMFGGVLRLSGIGDALSSSLSNLGISLILQAFLISTLLRVAQGSATVALTTTAGL
LSAAVATADLSNVQLTALVMAIAAGATVLSHVNDSGFWLVSRFFGMDVKTTLKTWTVMETTLGLSAFVLSLGLWAVA

Sequences:

>Translated_477_residues
MEAIDPAYGTATLLLIAAGAVAVLLFLIIKVKLHAFVALVLVSLLTALAAGIPVADVPSALAFGFSNTLGSVALLVGFGV
MIGRLLEITGGAQVLADTLIGRFGEKRAPFALGVAALLFGFPIFFDAGLVVFLPIIMTVARRFGGSLLLYAFPAAGAFAA
MHALVPPHPGPVAAAELLGANIGLTLIIGVPVAVASWYVGAFLVSQFIGRRVHVDIPTSLFGEINGGRDADESAPSAGGA
VGTARTATRTPPAFMTVLGVLLLPFVLISFNTVLDTLMTAGVIEEGATWAEYLKLLGTTSIALLITVIVATLALGLRGRS
MADVSNILDNALGPICAIILITGAGGMFGGVLRLSGIGDALSSSLSNLGISLILQAFLISTLLRVAQGSATVALTTTAGL
LSAAVATADLSNVQLTALVMAIAAGATVLSHVNDSGFWLVSRFFGMDVKTTLKTWTVMETTLGLSAFVLSLGLWAVA
>Mature_477_residues
MEAIDPAYGTATLLLIAAGAVAVLLFLIIKVKLHAFVALVLVSLLTALAAGIPVADVPSALAFGFSNTLGSVALLVGFGV
MIGRLLEITGGAQVLADTLIGRFGEKRAPFALGVAALLFGFPIFFDAGLVVFLPIIMTVARRFGGSLLLYAFPAAGAFAA
MHALVPPHPGPVAAAELLGANIGLTLIIGVPVAVASWYVGAFLVSQFIGRRVHVDIPTSLFGEINGGRDADESAPSAGGA
VGTARTATRTPPAFMTVLGVLLLPFVLISFNTVLDTLMTAGVIEEGATWAEYLKLLGTTSIALLITVIVATLALGLRGRS
MADVSNILDNALGPICAIILITGAGGMFGGVLRLSGIGDALSSSLSNLGISLILQAFLISTLLRVAQGSATVALTTTAGL
LSAAVATADLSNVQLTALVMAIAAGATVLSHVNDSGFWLVSRFFGMDVKTTLKTWTVMETTLGLSAFVLSLGLWAVA

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1789097, Length=468, Percent_Identity=40.5982905982906, Blast_Score=273, Evalue=1e-74,
Organism=Escherichia coli, GI1790716, Length=449, Percent_Identity=34.5211581291759, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI48994939, Length=455, Percent_Identity=35.1648351648352, Blast_Score=233, Evalue=1e-62,
Organism=Escherichia coli, GI48994935, Length=456, Percent_Identity=33.5526315789474, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1790776, Length=443, Percent_Identity=31.6027088036117, Blast_Score=212, Evalue=3e-56,
Organism=Escherichia coli, GI2367370, Length=439, Percent_Identity=33.4851936218679, Blast_Score=211, Evalue=6e-56,
Organism=Escherichia coli, GI1788707, Length=439, Percent_Identity=29.8405466970387, Blast_Score=171, Evalue=8e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 48653; Mature: 48653

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAIDPAYGTATLLLIAAGAVAVLLFLIIKVKLHAFVALVLVSLLTALAAGIPVADVPSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LAFGFSNTLGSVALLVGFGVMIGRLLEITGGAQVLADTLIGRFGEKRAPFALGVAALLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FPIFFDAGLVVFLPIIMTVARRFGGSLLLYAFPAAGAFAAMHALVPPHPGPVAAAELLGA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHCC
NIGLTLIIGVPVAVASWYVGAFLVSQFIGRRVHVDIPTSLFGEINGGRDADESAPSAGGA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCCCCCCCCCCCCCCCC
VGTARTATRTPPAFMTVLGVLLLPFVLISFNTVLDTLMTAGVIEEGATWAEYLKLLGTTS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IALLITVIVATLALGLRGRSMADVSNILDNALGPICAIILITGAGGMFGGVLRLSGIGDA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
LSSSLSNLGISLILQAFLISTLLRVAQGSATVALTTTAGLLSAAVATADLSNVQLTALVM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHH
AIAAGATVLSHVNDSGFWLVSRFFGMDVKTTLKTWTVMETTLGLSAFVLSLGLWAVA
HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEAIDPAYGTATLLLIAAGAVAVLLFLIIKVKLHAFVALVLVSLLTALAAGIPVADVPSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LAFGFSNTLGSVALLVGFGVMIGRLLEITGGAQVLADTLIGRFGEKRAPFALGVAALLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FPIFFDAGLVVFLPIIMTVARRFGGSLLLYAFPAAGAFAAMHALVPPHPGPVAAAELLGA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHCC
NIGLTLIIGVPVAVASWYVGAFLVSQFIGRRVHVDIPTSLFGEINGGRDADESAPSAGGA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCCCCCCCCCCCCCCCC
VGTARTATRTPPAFMTVLGVLLLPFVLISFNTVLDTLMTAGVIEEGATWAEYLKLLGTTS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IALLITVIVATLALGLRGRSMADVSNILDNALGPICAIILITGAGGMFGGVLRLSGIGDA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
LSSSLSNLGISLILQAFLISTLLRVAQGSATVALTTTAGLLSAAVATADLSNVQLTALVM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHH
AIAAGATVLSHVNDSGFWLVSRFFGMDVKTTLKTWTVMETTLGLSAFVLSLGLWAVA
HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]