| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871437
Identifier: 119871437
GI number: 119871437
Start: 5645738
End: 5646769
Strand: Direct
Name: 119871437
Synonym: Mkms_5413
Alternate gene names: NA
Gene position: 5645738-5646769 (Clockwise)
Preceding gene: 119871436
Following gene: 119871438
Centisome position: 98.41
GC content: 68.41
Gene sequence:
>1032_bases ATGACCGCAGCACCAGAAGCGTCGCCGCTCGAAGCCCGGGTCGGCCACTACTACCAGATGGACGACACCTATCTGGTCGG CCGCGAGAAGGTCCGCGAATACGCCCGTGCCGTGCAGGACTATCACCCGGCGCACTGGGACGTCGCCGCCGCCGCCGACC TGGGATATTCGGGTCTGGTGGCGCCACTGACGTTCACGTCGGCCCCGGGCATGTCCTGCAACCGCCGCATGTTCGAGCAG ATCGTCGTCGGCTACGACACCTACCTGCAGACCGAGGAGGTCTTCGAGCAGCACCGCCCGATCGTGGCCGGGGACGAACT CCGGGTCGACGTCGAGTTGACGTCGGTGCGCAGGATCGCCGGCCGGGACATGATCACGGTCACCAACACCTTCACCGACA CGGCCGGCGAACGGGTGCACACCCTGCACACCACGGTGGTCGGCGTCACCGCCGAGGACCTCAATCCCGAGGTGAAGACG GCCGTGCAGAACGCGATGATGCACGACGTGGACTTCTCCGGCGTCGGCAGCCTCGACGGCCACTACGAGAAGACCGTCCG TCCGGAGGGCGACGTGCGCATCGCCGACGGCGGCCTGACACGCACACCCGGGACGCCGTCCTTCGACGACGTGAAGGTCG GCGACGAGTTGCCGGTGCGCCACACCCGGCTGTCCCGCGGTGACCTCGTCAACTATGCCGGCGTGGCCGGTGACGCCAAC CCGATCCACTGGGACGAGGACATCGCCAAACTGGCCGGACTGCCCGACGTGATCGCCCACGGCATGCTCACCATGGGTCT GGGCGCCGGATTCGCCTCCGCATGGACGGGTGACCCCGGTGCGGTCACCCGCTACGCGGTGCGGCTGTCCGCGCCCGCGA TCGTGCCGGCCAAGGAGGGCGCCGACATCGAGTTCAGCGGGCGCATCAAATCGCTGGACCCGGCGACGCGCTCCGGCGTC ATCGTGGTCGCGGCGAAGTCGCAGGGCAAGAAGATCTTCGGCCTGGCGACGATGAACGTCCGCTTCCGCTGA
Upstream 100 bases:
>100_bases GAACTGCTGAACAAGCTCGGCGACGCCCTGGCATGACGCGCCGGTTAATGTGCTGGGGTCGCCGTCCGCGACGTGCCGAT AGAAGAGTTGAGTGAATTTC
Downstream 100 bases:
>100_bases ACACCGTCGACGCGCTCCGGCCCGTCGCCCTGTGGGCGGCGGAGTGTGCGGCGCGTGCGCTTCCCCTCTACGAGGCGGCG GCGCCGGGCGATCACCGGCC
Product: dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTAAPEASPLEARVGHYYQMDDTYLVGREKVREYARAVQDYHPAHWDVAAAADLGYSGLVAPLTFTSAPGMSCNRRMFEQ IVVGYDTYLQTEEVFEQHRPIVAGDELRVDVELTSVRRIAGRDMITVTNTFTDTAGERVHTLHTTVVGVTAEDLNPEVKT AVQNAMMHDVDFSGVGSLDGHYEKTVRPEGDVRIADGGLTRTPGTPSFDDVKVGDELPVRHTRLSRGDLVNYAGVAGDAN PIHWDEDIAKLAGLPDVIAHGMLTMGLGAGFASAWTGDPGAVTRYAVRLSAPAIVPAKEGADIEFSGRIKSLDPATRSGV IVVAAKSQGKKIFGLATMNVRFR
Sequences:
>Translated_343_residues MTAAPEASPLEARVGHYYQMDDTYLVGREKVREYARAVQDYHPAHWDVAAAADLGYSGLVAPLTFTSAPGMSCNRRMFEQ IVVGYDTYLQTEEVFEQHRPIVAGDELRVDVELTSVRRIAGRDMITVTNTFTDTAGERVHTLHTTVVGVTAEDLNPEVKT AVQNAMMHDVDFSGVGSLDGHYEKTVRPEGDVRIADGGLTRTPGTPSFDDVKVGDELPVRHTRLSRGDLVNYAGVAGDAN PIHWDEDIAKLAGLPDVIAHGMLTMGLGAGFASAWTGDPGAVTRYAVRLSAPAIVPAKEGADIEFSGRIKSLDPATRSGV IVVAAKSQGKKIFGLATMNVRFR >Mature_342_residues TAAPEASPLEARVGHYYQMDDTYLVGREKVREYARAVQDYHPAHWDVAAAADLGYSGLVAPLTFTSAPGMSCNRRMFEQI VVGYDTYLQTEEVFEQHRPIVAGDELRVDVELTSVRRIAGRDMITVTNTFTDTAGERVHTLHTTVVGVTAEDLNPEVKTA VQNAMMHDVDFSGVGSLDGHYEKTVRPEGDVRIADGGLTRTPGTPSFDDVKVGDELPVRHTRLSRGDLVNYAGVAGDANP IHWDEDIAKLAGLPDVIAHGMLTMGLGAGFASAWTGDPGAVTRYAVRLSAPAIVPAKEGADIEFSGRIKSLDPATRSGVI VVAAKSQGKKIFGLATMNVRFR
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0336 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37024; Mature: 36893
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPEASPLEARVGHYYQMDDTYLVGREKVREYARAVQDYHPAHWDVAAAADLGYSGLV CCCCCCCCCCHHHCCCEEECCCEEEECHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEE APLTFTSAPGMSCNRRMFEQIVVGYDTYLQTEEVFEQHRPIVAGDELRVDVELTSVRRIA EEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCCEEEEEEHHHHHHHH GRDMITVTNTFTDTAGERVHTLHTTVVGVTAEDLNPEVKTAVQNAMMHDVDFSGVGSLDG CCCEEEEECCCCCCCCCEEEEEEEEEEEEEHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC HYEKTVRPEGDVRIADGGLTRTPGTPSFDDVKVGDELPVRHTRLSRGDLVNYAGVAGDAN CHHHCCCCCCCEEEECCCEECCCCCCCCCCEECCCCCCCHHHCCCCCCEEEECCCCCCCC PIHWDEDIAKLAGLPDVIAHGMLTMGLGAGFASAWTGDPGAVTRYAVRLSAPAIVPAKEG CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEECCCEEEECCCC ADIEFSGRIKSLDPATRSGVIVVAAKSQGKKIFGLATMNVRFR CCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEEC >Mature Secondary Structure TAAPEASPLEARVGHYYQMDDTYLVGREKVREYARAVQDYHPAHWDVAAAADLGYSGLV CCCCCCCCCHHHCCCEEECCCEEEECHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEE APLTFTSAPGMSCNRRMFEQIVVGYDTYLQTEEVFEQHRPIVAGDELRVDVELTSVRRIA EEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCCEEEEEEHHHHHHHH GRDMITVTNTFTDTAGERVHTLHTTVVGVTAEDLNPEVKTAVQNAMMHDVDFSGVGSLDG CCCEEEEECCCCCCCCCEEEEEEEEEEEEEHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC HYEKTVRPEGDVRIADGGLTRTPGTPSFDDVKVGDELPVRHTRLSRGDLVNYAGVAGDAN CHHHCCCCCCCEEEECCCEECCCCCCCCCCEECCCCCCCHHHCCCCCCEEEECCCCCCCC PIHWDEDIAKLAGLPDVIAHGMLTMGLGAGFASAWTGDPGAVTRYAVRLSAPAIVPAKEG CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEECCCEEEECCCC ADIEFSGRIKSLDPATRSGVIVVAAKSQGKKIFGLATMNVRFR CCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA