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The map label for this gene is ygaP [C]

Identifier: 119871426

GI number: 119871426

Start: 5636817

End: 5637482

Strand: Direct

Name: ygaP [C]

Synonym: Mkms_5402

Alternate gene names: 119871426

Gene position: 5636817-5637482 (Clockwise)

Preceding gene: 119871422

Following gene: 119871427

Centisome position: 98.25

GC content: 67.27

Gene sequence:

>666_bases
ATGAGCCTCAGCATACCCCCCGCGGTATCGGTATCTCCGGGCCGCTCCGATGAAAGGACTTTTCGAATGACCGCACCCGT
CACGATCGACTCGCACGACCTCAGTCAGATGCTCGGTTCGGCGACGCCACCCCGGGTCATCGATGTGCGCACCCCCGGCG
AGTTCGAGACCGCACACATCGCCGGCGCCTACAACGTGCCGTTGGACCTGCTGCGCGAACACCGCGACGAGATCATCGAA
CATCTCGATGAGGACGTCGTCCTGGTCTGCCGGTCCGGTCAGCGCGCCACCCAGGCCGAGGAGACGCTGCGCCAGGCCGG
ACTCACCAACGTGCACATCCTCGACGGCGGCATCACCGCCTGGGAGGCAAAGGGTTTCGCGGTCAACCGCGGCGCCCAGC
GCTGGGACCTCGAGCGCCAGGTCCGCCTGGTCGCGGGCTCGATCGTGCTGACCAGCATCCTGGGCAGCATCGCCGCGCCG
AAACTCAAGTGGGTCGCCGGGGCCATCGGCGGCGGGCTGACCTTCGCCGCGGTGTCCAACACCTGCGCGATGGGCATGAT
GCTGTCCAAGCTGCCCTACAACCGTGGCGCCTCCTGCGACGCCCAGAGCATCGTGGCCCAGCTGGTGGATTCCGCGCCCG
CGAAGAAGTCGGTGGGTCGATCATGA

Upstream 100 bases:

>100_bases
CGTTCTGCTCATCAGCCTGCCTATACCCCTATGGGTATGTCAAGTACCCTAGGGGGTATGAAAATTCCCACTTGCTGTTA
CCCCCGGGGGTATGTGTAAC

Downstream 100 bases:

>100_bases
TCGGGCTCACCATCGGACTGGCCGTCTTCGTCGGCATCGCACTGGGACTGCTCGGCGGCGGAGGTTCCATCCTGACCGTC
CCGCTGTTGGCATACGTGGC

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSLSIPPAVSVSPGRSDERTFRMTAPVTIDSHDLSQMLGSATPPRVIDVRTPGEFETAHIAGAYNVPLDLLREHRDEIIE
HLDEDVVLVCRSGQRATQAEETLRQAGLTNVHILDGGITAWEAKGFAVNRGAQRWDLERQVRLVAGSIVLTSILGSIAAP
KLKWVAGAIGGGLTFAAVSNTCAMGMMLSKLPYNRGASCDAQSIVAQLVDSAPAKKSVGRS

Sequences:

>Translated_221_residues
MSLSIPPAVSVSPGRSDERTFRMTAPVTIDSHDLSQMLGSATPPRVIDVRTPGEFETAHIAGAYNVPLDLLREHRDEIIE
HLDEDVVLVCRSGQRATQAEETLRQAGLTNVHILDGGITAWEAKGFAVNRGAQRWDLERQVRLVAGSIVLTSILGSIAAP
KLKWVAGAIGGGLTFAAVSNTCAMGMMLSKLPYNRGASCDAQSIVAQLVDSAPAKKSVGRS
>Mature_220_residues
SLSIPPAVSVSPGRSDERTFRMTAPVTIDSHDLSQMLGSATPPRVIDVRTPGEFETAHIAGAYNVPLDLLREHRDEIIEH
LDEDVVLVCRSGQRATQAEETLRQAGLTNVHILDGGITAWEAKGFAVNRGAQRWDLERQVRLVAGSIVLTSILGSIAAPK
LKWVAGAIGGGLTFAAVSNTCAMGMMLSKLPYNRGASCDAQSIVAQLVDSAPAKKSVGRS

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1789022, Length=178, Percent_Identity=30.8988764044944, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021309
- InterPro:   IPR001763 [H]

Pfam domain/function: PF11127 DUF2892; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 23526; Mature: 23395

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSIPPAVSVSPGRSDERTFRMTAPVTIDSHDLSQMLGSATPPRVIDVRTPGEFETAHI
CCCCCCCCCEECCCCCCCCEEEEECCEEECHHHHHHHHCCCCCCCEEEECCCCCCCCEEE
AGAYNVPLDLLREHRDEIIEHLDEDVVLVCRSGQRATQAEETLRQAGLTNVHILDGGITA
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCEE
WEAKGFAVNRGAQRWDLERQVRLVAGSIVLTSILGSIAAPKLKWVAGAIGGGLTFAAVSN
EECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHH
TCAMGMMLSKLPYNRGASCDAQSIVAQLVDSAPAKKSVGRS
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLSIPPAVSVSPGRSDERTFRMTAPVTIDSHDLSQMLGSATPPRVIDVRTPGEFETAHI
CCCCCCCCEECCCCCCCCEEEEECCEEECHHHHHHHHCCCCCCCEEEECCCCCCCCEEE
AGAYNVPLDLLREHRDEIIEHLDEDVVLVCRSGQRATQAEETLRQAGLTNVHILDGGITA
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCEE
WEAKGFAVNRGAQRWDLERQVRLVAGSIVLTSILGSIAAPKLKWVAGAIGGGLTFAAVSN
EECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHH
TCAMGMMLSKLPYNRGASCDAQSIVAQLVDSAPAKKSVGRS
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]