| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871289
Identifier: 119871289
GI number: 119871289
Start: 5497731
End: 5498387
Strand: Direct
Name: 119871289
Synonym: Mkms_5262
Alternate gene names: NA
Gene position: 5497731-5498387 (Clockwise)
Preceding gene: 119871286
Following gene: 119871292
Centisome position: 95.83
GC content: 68.34
Gene sequence:
>657_bases ATGGCCATGAAACGTGTTCTGTGCTTCGGGGACTCGCTGACCTGGGGGTGGGTCCCGGTCGAGGACGGGGTGCCCACCGA ACGCTATCCGCGCGACGTGCGGTGGACCGGCGTCCTCGCCGACGAACTGGGCGCCGACTACACCGTCATCGAAGAAGGGC TCAGCGCACGCACCACCTCAGCCGACGACCCCAGCGATCCGCGACTGAACGGTGCGGCCTACCTACCGGCCTGTCTGGCC AGCCACCTGCCACTGGACCTCGTCGTGATCATGCTCGGCACCAACGACACCAAGGCGTACTTCCACCGCGAACCGCTGGA CATCGCCATGGGGATGGGGATCCTGGTCACCCAGGTCCTCACCGCCGCGGGCGGCGTCGGCACCGTGTATCCGGCACCCC GGACCCTGGTCGTCGCCCCGCCGCCGCTGGCGCAGATCCCCCACCCGTGGTTCGACCTGATCTTCGCGGGCGGGCACGAG AAGACCGCCGCACTGTCGAGCGCCTATTCGGCGCTGGCCTCGCACATGAAGGTCGACTTCTTCGATGCCGGCTCGGTCAT CAGCACCGACGGGGTCGACGGCATCCACTTCACCGAGCGAAACAACCGGGACCTCGGCGCGGCGCTGGCCGCGCAGGTGC GCACGCTACTTTCGTAG
Upstream 100 bases:
>100_bases CGTTCTTCCGGCCACAGGCCCGCCCCTCTCGTCGACTCCACGAGGGTAACCCGCACCGGTAATCCCCTCCGGCGCACCGT GTCGGCGCTACGGTCATCGC
Downstream 100 bases:
>100_bases CGCGCGCACCTGTCCGTCAGACGCTCGTGGGTTCGGGTGCCTTCGGCGGAAGCCCGGGCCCTGGTGAAGGCCACGGCGAC GGCACCGGCTGGTTGCGCAC
Product: GDSL family lipase
Products: NA
Alternate protein names: Arylesterase Protein; Lipolytic G-D-S-L; GDSL Family Lipase; GDSL-Family Lipase/Acylhydrolase; Hydrolase; Lipolytic Protein; Methylated-DNA-Protein-Cysteinemethyltransferase; Lipolytic G-D-S-L Family; GDSL-Like Lipase/Acylhydrolase; Lipolytic Protein G-D-S-L Family; Lysophospholipase-Like Protein
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAMKRVLCFGDSLTWGWVPVEDGVPTERYPRDVRWTGVLADELGADYTVIEEGLSARTTSADDPSDPRLNGAAYLPACLA SHLPLDLVVIMLGTNDTKAYFHREPLDIAMGMGILVTQVLTAAGGVGTVYPAPRTLVVAPPPLAQIPHPWFDLIFAGGHE KTAALSSAYSALASHMKVDFFDAGSVISTDGVDGIHFTERNNRDLGAALAAQVRTLLS
Sequences:
>Translated_218_residues MAMKRVLCFGDSLTWGWVPVEDGVPTERYPRDVRWTGVLADELGADYTVIEEGLSARTTSADDPSDPRLNGAAYLPACLA SHLPLDLVVIMLGTNDTKAYFHREPLDIAMGMGILVTQVLTAAGGVGTVYPAPRTLVVAPPPLAQIPHPWFDLIFAGGHE KTAALSSAYSALASHMKVDFFDAGSVISTDGVDGIHFTERNNRDLGAALAAQVRTLLS >Mature_217_residues AMKRVLCFGDSLTWGWVPVEDGVPTERYPRDVRWTGVLADELGADYTVIEEGLSARTTSADDPSDPRLNGAAYLPACLAS HLPLDLVVIMLGTNDTKAYFHREPLDIAMGMGILVTQVLTAAGGVGTVYPAPRTLVVAPPPLAQIPHPWFDLIFAGGHEK TAALSSAYSALASHMKVDFFDAGSVISTDGVDGIHFTERNNRDLGAALAAQVRTLLS
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23277; Mature: 23146
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKRVLCFGDSLTWGWVPVEDGVPTERYPRDVRWTGVLADELGADYTVIEEGLSARTTS CCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHCCCCCCCCC ADDPSDPRLNGAAYLPACLASHLPLDLVVIMLGTNDTKAYFHREPLDIAMGMGILVTQVL CCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHH TAAGGVGTVYPAPRTLVVAPPPLAQIPHPWFDLIFAGGHEKTAALSSAYSALASHMKVDF HHCCCCCEECCCCCEEEECCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHCEEEE FDAGSVISTDGVDGIHFTERNNRDLGAALAAQVRTLLS ECCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AMKRVLCFGDSLTWGWVPVEDGVPTERYPRDVRWTGVLADELGADYTVIEEGLSARTTS CCCEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHCCCCCCCCC ADDPSDPRLNGAAYLPACLASHLPLDLVVIMLGTNDTKAYFHREPLDIAMGMGILVTQVL CCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHH TAAGGVGTVYPAPRTLVVAPPPLAQIPHPWFDLIFAGGHEKTAALSSAYSALASHMKVDF HHCCCCCEECCCCCEEEECCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHCEEEE FDAGSVISTDGVDGIHFTERNNRDLGAALAAQVRTLLS ECCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA