| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871228
Identifier: 119871228
GI number: 119871228
Start: 5443327
End: 5444664
Strand: Direct
Name: 119871228
Synonym: Mkms_5201
Alternate gene names: NA
Gene position: 5443327-5444664 (Clockwise)
Preceding gene: 119871227
Following gene: 119871229
Centisome position: 94.88
GC content: 70.63
Gene sequence:
>1338_bases GTGACCCCCGCGGCGCACGTGACGGTCCTGGCGCACGGACTCGGCGGCTCCACCGATCTGCCGATCCCCTACACCTACGC ACTGCTCGGCGCCGCCTGGGCGCTCACCGCGACGTTCGCCGTGGTCGCGCTCGCCTGGCGCAAACCTCGGTTCGACGAGA CGCGGCCGGGCCGCGCGCTGCCGCAGTGGGTCACCTCCGTCGTCGACGCGTCGGTGACGCGCTGGGTGATCGCCCTGGCG GCGCTGGCGTTCACGCTGTGGGTGGCGCTGGCCGCGTTCTTCGGCCCGCAGAACGCCGAGAACCCGCTACCCGGCGTGTT CTACGTGCTCATCTGGGTCGGCCTGGTCGCACTGTCATGGGCGATCGGACCGGTTTGGCGGGTGCTCTCCCCGGTGCGTG CCCTCTTCCGGGTACTGCAGTTGCACCGGCGCGAGAACCGGCCGCCCTACCCGGTGCGGCTCGGGTACTGGCCCGCGGCG TTCGGGCTGTTCGCGTTCGTGTGGCTGGAACTGGCCAGCCCCGACCCGGGCTCGGTCACCGCCATCCGCACCTGGTTGCT CGTCTATGTCGGCGTGACGTTCGCGGGCGCCCTGTGGTTCGGCGAGCGGTGGTGCGCGCGGGCCGACCCGTTCGAGGTGT ACAGCGTGGTCGCCTCGCGGCTGTCGCTGTTCCGGCGGCAGCGCGACACCGGGCGGATCGCGATCGGCAACCCGTTCGAC CACCTGCCGACGCTGCCGGTGCGGCCGGGCACCGTCGCGGTGCTGGCGGTGTTGCTCGGGTCCACCGCCTTCGACAGTTT CTCGGCGATGCCGGTGTGGCGCGACTTCGTCGATTCGACCGCGGGCGGCGCATGGACGGCGACGCTGCTCAAGACCGCGG GGCTCGCGGTGTTCGCGCTGGTCGTGGCGGGCACGTTCAGCGCCGCCGCGATGGCGACCGCGGGTGTCGACCGGCAGCGA CGGCGCGAACTGCCCGGACTGATGGCCCACTCGCTGATCCCGATCGTCATCGGCTACGTGTTCGCCCACTACCTGACCTA CCTCGTCGAACGCGGTCAGCAGACCGTCATCCTGCTGGCCGATCCGCTGCAGCGTGGCTGGAATCCGTTCGGTCTGGCCG ACGCCGAGGTCGGTTACCTGCTGTCGATGCACCCGTCGGTGCTCGCGACGCTGAAGGTCGCGTTCGTGGTCGCCGGGCAC ATGGCCGGCGTGGTCGCCGCGCACGACCGGGCGCTCAAACTGCTCCCGTCGGCGCACCAGATCACCGGCCAACTCGGCAT GATGCTGGTGATGGTCGGCTACACGTTCACCGGTTTGTATCTGTTATTCGGTGGCTGA
Upstream 100 bases:
>100_bases CCAAGGCCGGCCAGATGTTCCAGTTCACCGTCGACGTGCCCGGCAACGTCGAGATCGAACTGCACGACCTCAACCGCGTG ATCGCCGGCGTGCAAGTGCA
Downstream 100 bases:
>100_bases GGTCACACCGCCGGGTTAGTGTGGCAGGGTGCCCCCCGAAGAAACACTGGAGCGGGCACTCGCCGGTGGGTCGCCCCAAA ATGTCGGATGGTTCCGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTPAAHVTVLAHGLGGSTDLPIPYTYALLGAAWALTATFAVVALAWRKPRFDETRPGRALPQWVTSVVDASVTRWVIALA ALAFTLWVALAAFFGPQNAENPLPGVFYVLIWVGLVALSWAIGPVWRVLSPVRALFRVLQLHRRENRPPYPVRLGYWPAA FGLFAFVWLELASPDPGSVTAIRTWLLVYVGVTFAGALWFGERWCARADPFEVYSVVASRLSLFRRQRDTGRIAIGNPFD HLPTLPVRPGTVAVLAVLLGSTAFDSFSAMPVWRDFVDSTAGGAWTATLLKTAGLAVFALVVAGTFSAAAMATAGVDRQR RRELPGLMAHSLIPIVIGYVFAHYLTYLVERGQQTVILLADPLQRGWNPFGLADAEVGYLLSMHPSVLATLKVAFVVAGH MAGVVAAHDRALKLLPSAHQITGQLGMMLVMVGYTFTGLYLLFGG
Sequences:
>Translated_445_residues MTPAAHVTVLAHGLGGSTDLPIPYTYALLGAAWALTATFAVVALAWRKPRFDETRPGRALPQWVTSVVDASVTRWVIALA ALAFTLWVALAAFFGPQNAENPLPGVFYVLIWVGLVALSWAIGPVWRVLSPVRALFRVLQLHRRENRPPYPVRLGYWPAA FGLFAFVWLELASPDPGSVTAIRTWLLVYVGVTFAGALWFGERWCARADPFEVYSVVASRLSLFRRQRDTGRIAIGNPFD HLPTLPVRPGTVAVLAVLLGSTAFDSFSAMPVWRDFVDSTAGGAWTATLLKTAGLAVFALVVAGTFSAAAMATAGVDRQR RRELPGLMAHSLIPIVIGYVFAHYLTYLVERGQQTVILLADPLQRGWNPFGLADAEVGYLLSMHPSVLATLKVAFVVAGH MAGVVAAHDRALKLLPSAHQITGQLGMMLVMVGYTFTGLYLLFGG >Mature_444_residues TPAAHVTVLAHGLGGSTDLPIPYTYALLGAAWALTATFAVVALAWRKPRFDETRPGRALPQWVTSVVDASVTRWVIALAA LAFTLWVALAAFFGPQNAENPLPGVFYVLIWVGLVALSWAIGPVWRVLSPVRALFRVLQLHRRENRPPYPVRLGYWPAAF GLFAFVWLELASPDPGSVTAIRTWLLVYVGVTFAGALWFGERWCARADPFEVYSVVASRLSLFRRQRDTGRIAIGNPFDH LPTLPVRPGTVAVLAVLLGSTAFDSFSAMPVWRDFVDSTAGGAWTATLLKTAGLAVFALVVAGTFSAAAMATAGVDRQRR RELPGLMAHSLIPIVIGYVFAHYLTYLVERGQQTVILLADPLQRGWNPFGLADAEVGYLLSMHPSVLATLKVAFVVAGHM AGVVAAHDRALKLLPSAHQITGQLGMMLVMVGYTFTGLYLLFGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48232; Mature: 48101
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAAHVTVLAHGLGGSTDLPIPYTYALLGAAWALTATFAVVALAWRKPRFDETRPGRAL CCCCCEEHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH PQWVTSVVDASVTRWVIALAALAFTLWVALAAFFGPQNAENPLPGVFYVLIWVGLVALSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH AIGPVWRVLSPVRALFRVLQLHRRENRPPYPVRLGYWPAAFGLFAFVWLELASPDPGSVT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHH AIRTWLLVYVGVTFAGALWFGERWCARADPFEVYSVVASRLSLFRRQRDTGRIAIGNPFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCHH HLPTLPVRPGTVAVLAVLLGSTAFDSFSAMPVWRDFVDSTAGGAWTATLLKTAGLAVFAL CCCCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VVAGTFSAAAMATAGVDRQRRRELPGLMAHSLIPIVIGYVFAHYLTYLVERGQQTVILLA HHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE DPLQRGWNPFGLADAEVGYLLSMHPSVLATLKVAFVVAGHMAGVVAAHDRALKLLPSAHQ CHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ITGQLGMMLVMVGYTFTGLYLLFGG HHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure TPAAHVTVLAHGLGGSTDLPIPYTYALLGAAWALTATFAVVALAWRKPRFDETRPGRAL CCCCEEHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH PQWVTSVVDASVTRWVIALAALAFTLWVALAAFFGPQNAENPLPGVFYVLIWVGLVALSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH AIGPVWRVLSPVRALFRVLQLHRRENRPPYPVRLGYWPAAFGLFAFVWLELASPDPGSVT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHH AIRTWLLVYVGVTFAGALWFGERWCARADPFEVYSVVASRLSLFRRQRDTGRIAIGNPFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCHH HLPTLPVRPGTVAVLAVLLGSTAFDSFSAMPVWRDFVDSTAGGAWTATLLKTAGLAVFAL CCCCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VVAGTFSAAAMATAGVDRQRRRELPGLMAHSLIPIVIGYVFAHYLTYLVERGQQTVILLA HHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE DPLQRGWNPFGLADAEVGYLLSMHPSVLATLKVAFVVAGHMAGVVAAHDRALKLLPSAHQ CHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ITGQLGMMLVMVGYTFTGLYLLFGG HHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA