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The map label for this gene is yjgI [C]

Identifier: 119871116

GI number: 119871116

Start: 5324260

End: 5325030

Strand: Direct

Name: yjgI [C]

Synonym: Mkms_5089

Alternate gene names: 119871116

Gene position: 5324260-5325030 (Clockwise)

Preceding gene: 119871115

Following gene: 119871117

Centisome position: 92.8

GC content: 68.87

Gene sequence:

>771_bases
ATGGTGCTTGACGCCGTGGGGAACCCCCAGACCATCCTGTTGCTCGGCGGGACCTCCGAGATCGGGCTGGCGATCTGCGA
GCGCTACCTGCGCGACGCGCCGGCCCGCATCGTGCTCGCCGCGCTGCCCGATGATCCGGGCCGCGACGCTGCCGTCGCCC
AGATGCGCCGTGCGGGAGCGAAATCCGTCGAGGTGATCGACTTCGACGCGGTCGACACCGCCAGCCACCCGGACGTGATC
GACAAGGCGTCGGCGGGCGGATCCCGCGACATCGACGTGGCGATCGTCGCGTTCGGATTGCTCGGCGACGCCGAGGAACT
GTGGCAGAACCAGCGCAAGGCCGTGCAGATCGCCGAGATCAACTACACCGCGGCCGTTTCCGTCGGGGTGCTGCTCGGCG
AGCAGATGCGCGCACAGGGTTTCGGCCAGATCATCGCGATGAGCTCGGCGGCCGGTGAGCGGGTGCGGCGGTCGAACTTC
GTCTACGGCTCCACCAAGGCCGGGCTCGACGGGTTCTACCTCGGCCTCGGAGAAGCGCTGCGCGAGTACGGGGTTCACGT
CCTGGTCATCAGGCCCGGCCAGGTGCGCACCCGGATGAGCGCCCACGTCAAGGAAGCGCCGCTGACCGTCGACAAGGAGT
ACGTCGCCGAACTGGCGGTCACCGCGTCGGCCAAGGGCAAGGACCTGGTCTGGGCGCCGGGCGCCTTCCGCTACGTGATG
ATGGTGCTGCGCCACATCCCGCGGCCCATCTTCCGCAAGCTGCCCATCTAA

Upstream 100 bases:

>100_bases
CATGTACCCGCGCATCGACGAGTGGATCGCCGTGCGCCGCCGGGTCGATCCCGACGGGGTGTTCGCCTCCGACATGGCCC
GACGTTTGGAGCTGCTCTAA

Downstream 100 bases:

>100_bases
CCCGGTGGGCACCAACTCGCTGGCCGCCCCGATCGGGATCGCGGGCCGGATGGTGGTGGCGGCGCTGATCGCCGCTGCCG
TCGCGGTCGTCTCGCTCGCG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MVLDAVGNPQTILLLGGTSEIGLAICERYLRDAPARIVLAALPDDPGRDAAVAQMRRAGAKSVEVIDFDAVDTASHPDVI
DKASAGGSRDIDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEQMRAQGFGQIIAMSSAAGERVRRSNF
VYGSTKAGLDGFYLGLGEALREYGVHVLVIRPGQVRTRMSAHVKEAPLTVDKEYVAELAVTASAKGKDLVWAPGAFRYVM
MVLRHIPRPIFRKLPI

Sequences:

>Translated_256_residues
MVLDAVGNPQTILLLGGTSEIGLAICERYLRDAPARIVLAALPDDPGRDAAVAQMRRAGAKSVEVIDFDAVDTASHPDVI
DKASAGGSRDIDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEQMRAQGFGQIIAMSSAAGERVRRSNF
VYGSTKAGLDGFYLGLGEALREYGVHVLVIRPGQVRTRMSAHVKEAPLTVDKEYVAELAVTASAKGKDLVWAPGAFRYVM
MVLRHIPRPIFRKLPI
>Mature_256_residues
MVLDAVGNPQTILLLGGTSEIGLAICERYLRDAPARIVLAALPDDPGRDAAVAQMRRAGAKSVEVIDFDAVDTASHPDVI
DKASAGGSRDIDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEQMRAQGFGQIIAMSSAAGERVRRSNF
VYGSTKAGLDGFYLGLGEALREYGVHVLVIRPGQVRTRMSAHVKEAPLTVDKEYVAELAVTASAKGKDLVWAPGAFRYVM
MVLRHIPRPIFRKLPI

Specific function: Involved in the epimerization of decaprenylphosphoryl ribose (DPR) to decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Probably catalyzes the reduction of at C-2 of decaprenylphosphoryl 2-ket

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27480; Mature: 27480

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLDAVGNPQTILLLGGTSEIGLAICERYLRDAPARIVLAALPDDPGRDAAVAQMRRAGA
CEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCC
KSVEVIDFDAVDTASHPDVIDKASAGGSRDIDVAIVAFGLLGDAEELWQNQRKAVQIAEI
CCEEEEEECCCCCCCCCCHHHHCCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHEEEEEEC
NYTAAVSVGVLLGEQMRAQGFGQIIAMSSAAGERVRRSNFVYGSTKAGLDGFYLGLGEAL
CCHHHHHHHHHHHHHHHHCCCHHEEEECHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHH
REYGVHVLVIRPGQVRTRMSAHVKEAPLTVDKEYVAELAVTASAKGKDLVWAPGAFRYVM
HHCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHH
MVLRHIPRPIFRKLPI
HHHHHCCHHHHHHCCC
>Mature Secondary Structure
MVLDAVGNPQTILLLGGTSEIGLAICERYLRDAPARIVLAALPDDPGRDAAVAQMRRAGA
CEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCC
KSVEVIDFDAVDTASHPDVIDKASAGGSRDIDVAIVAFGLLGDAEELWQNQRKAVQIAEI
CCEEEEEECCCCCCCCCCHHHHCCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHEEEEEEC
NYTAAVSVGVLLGEQMRAQGFGQIIAMSSAAGERVRRSNFVYGSTKAGLDGFYLGLGEAL
CCHHHHHHHHHHHHHHHHCCCHHEEEECHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHH
REYGVHVLVIRPGQVRTRMSAHVKEAPLTVDKEYVAELAVTASAKGKDLVWAPGAFRYVM
HHCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHH
MVLRHIPRPIFRKLPI
HHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]