| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is tyrA [H]
Identifier: 119871077
GI number: 119871077
Start: 5290522
End: 5291520
Strand: Direct
Name: tyrA [H]
Synonym: Mkms_5050
Alternate gene names: 119871077
Gene position: 5290522-5291520 (Clockwise)
Preceding gene: 119871071
Following gene: 119871083
Centisome position: 92.21
GC content: 72.37
Gene sequence:
>999_bases ATGGCCTCCGGCCCCGGTGCCGTGTGCCAACCTGGAACGGTGACGAAACCACCCGTGTGCGTTTTGGGCCTGGGCCTCAT CGGCGGCTCGGTGATGCGCGCCGCCGCGGCCGCCGGGCGCGAGGTGTTCGGGTACAACCGGTCGGTCGAGGGCGTCCAGG GTGCGCGCTTCGACGGTTTCGACGCCAGCGAGCACCTCGACGAGGTGCTCGGCCGCGCCGCCGAGACCTCGGCGCTGGTC GTGCTGGCCGTGCCGGTGCCCGCCCTCGGACTCATGCTGGGCCACATCCGCGACGCGGCGCCGCAATGTCCGCTCACCGA TGTGACGAGCGTCAAAGGCGCTGTGCTGGAACATGTTCGTTCATTCGGCCTACAGGAGCGCTTCGTCGGCGGACACCCGA TGGCGGGCACCGCGCACTCGGGCTGGGCGGCCGGCGACGCGGCGCTGTTCGTCGGTGCGCCGTGGGTGATCAGCGTCGAC GACCACGTCGACCCCGACGTGTGGGCACACGTGATGACGCTCGCGCTGGACTGCCACGCGGTGGTGGTGCCGGCCCGCTC CGACGAACACGACGCCGCCGCGGCCGGCATCTCGCACCTGCCGCACCTGCTCGCCGAGGCGCTGGCCGTCACCGCGGGTG AGGTGCCGCTGGCGTTCGCGCTGGCGGCCGGATCGTTCCGGGACGGCACCCGGGTGGCCGGGACGGCGCCCGATCTGGTG CGGGCGATGTGCGAGGCGAACTCGTCACAACTCGTCCCGGCGCTGGACCGCAGCATCGAGCTGCTCACCGCCGCGCGGGA GGCGCTGGCGCGACATGGTTCGGTGGCCGACCTGGTCGAATCGGGCCACGCCGCCCGCATGCGCTACGACAGCTTCAGCC GCCCCGAGATCATCACCACCGTGATCGGCGAGGAGAACTGGCGCGACGAACTGGCCGCCGCCGGCCGGGCCGGCGGGGTG ATCAGATCCGCGCTGCCAACCCGGGATAGTCGACGATGA
Upstream 100 bases:
>100_bases ACGACGGCCACCCCGAACCCGTCGGGTGTGCCCTGCGCCGGCGCACTCTGTGCTCCCATGTCGCGTTACGGTAGTCGCCC ACCAGCGCTTTTGACCAGGC
Downstream 100 bases:
>100_bases ACCCGTCGGCATCGACGGTGATCGTGGTGTCGGCGACCGGTGACTGCACCTTGATGCCGTCGGAGTCCGGGCCGCCGCTG TAGCTGATCGACGCCTGTTC
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MASGPGAVCQPGTVTKPPVCVLGLGLIGGSVMRAAAAAGREVFGYNRSVEGVQGARFDGFDASEHLDEVLGRAAETSALV VLAVPVPALGLMLGHIRDAAPQCPLTDVTSVKGAVLEHVRSFGLQERFVGGHPMAGTAHSGWAAGDAALFVGAPWVISVD DHVDPDVWAHVMTLALDCHAVVVPARSDEHDAAAAGISHLPHLLAEALAVTAGEVPLAFALAAGSFRDGTRVAGTAPDLV RAMCEANSSQLVPALDRSIELLTAAREALARHGSVADLVESGHAARMRYDSFSRPEIITTVIGEENWRDELAAAGRAGGV IRSALPTRDSRR
Sequences:
>Translated_332_residues MASGPGAVCQPGTVTKPPVCVLGLGLIGGSVMRAAAAAGREVFGYNRSVEGVQGARFDGFDASEHLDEVLGRAAETSALV VLAVPVPALGLMLGHIRDAAPQCPLTDVTSVKGAVLEHVRSFGLQERFVGGHPMAGTAHSGWAAGDAALFVGAPWVISVD DHVDPDVWAHVMTLALDCHAVVVPARSDEHDAAAAGISHLPHLLAEALAVTAGEVPLAFALAAGSFRDGTRVAGTAPDLV RAMCEANSSQLVPALDRSIELLTAAREALARHGSVADLVESGHAARMRYDSFSRPEIITTVIGEENWRDELAAAGRAGGV IRSALPTRDSRR >Mature_331_residues ASGPGAVCQPGTVTKPPVCVLGLGLIGGSVMRAAAAAGREVFGYNRSVEGVQGARFDGFDASEHLDEVLGRAAETSALVV LAVPVPALGLMLGHIRDAAPQCPLTDVTSVKGAVLEHVRSFGLQERFVGGHPMAGTAHSGWAAGDAALFVGAPWVISVDD HVDPDVWAHVMTLALDCHAVVVPARSDEHDAAAAGISHLPHLLAEALAVTAGEVPLAFALAAGSFRDGTRVAGTAPDLVR AMCEANSSQLVPALDRSIELLTAAREALARHGSVADLVESGHAARMRYDSFSRPEIITTVIGEENWRDELAAAGRAGGVI RSALPTRDSRR
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 34323; Mature: 34192
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGPGAVCQPGTVTKPPVCVLGLGLIGGSVMRAAAAAGREVFGYNRSVEGVQGARFDGF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCC DASEHLDEVLGRAAETSALVVLAVPVPALGLMLGHIRDAAPQCPLTDVTSVKGAVLEHVR CHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH SFGLQERFVGGHPMAGTAHSGWAAGDAALFVGAPWVISVDDHVDPDVWAHVMTLALDCHA HCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCE VVVPARSDEHDAAAAGISHLPHLLAEALAVTAGEVPLAFALAAGSFRDGTRVAGTAPDLV EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHH RAMCEANSSQLVPALDRSIELLTAAREALARHGSVADLVESGHAARMRYDSFSRPEIITT HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEEECCCCCCCCEEEE VIGEENWRDELAAAGRAGGVIRSALPTRDSRR ECCCCCHHHHHHHCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure ASGPGAVCQPGTVTKPPVCVLGLGLIGGSVMRAAAAAGREVFGYNRSVEGVQGARFDGF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCC DASEHLDEVLGRAAETSALVVLAVPVPALGLMLGHIRDAAPQCPLTDVTSVKGAVLEHVR CHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH SFGLQERFVGGHPMAGTAHSGWAAGDAALFVGAPWVISVDDHVDPDVWAHVMTLALDCHA HCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCE VVVPARSDEHDAAAAGISHLPHLLAEALAVTAGEVPLAFALAAGSFRDGTRVAGTAPDLV EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHH RAMCEANSSQLVPALDRSIELLTAAREALARHGSVADLVESGHAARMRYDSFSRPEIITT HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEEECCCCCCCCEEEE VIGEENWRDELAAAGRAGGVIRSALPTRDSRR ECCCCCHHHHHHHCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA