| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119870973
Identifier: 119870973
GI number: 119870973
Start: 5181418
End: 5182614
Strand: Direct
Name: 119870973
Synonym: Mkms_4946
Alternate gene names: NA
Gene position: 5181418-5182614 (Clockwise)
Preceding gene: 119870969
Following gene: 119870974
Centisome position: 90.31
GC content: 70.09
Gene sequence:
>1197_bases ATGGTTCCCATGAGCAACGACGCCGGTGGGCCCGGCCGGGGCTATCCGCCCCCCGGGTATCAACAGGGGTACCCCCCACC GGGTTACCAACAGGGCTACCCTCCACCGGGTTACCAACAGGGCTATCCGCCGCCCGGTTACCAACACGGCTATCCCCCAC CGGGTTACCAACACGGCTATCCACCGCCCGGATATCCGCCGCAGCAGGGTTACGCGCCGCCGGACGTGATCAAACCCGGT GTCATCCCGTTGCGCCCGCTCGGGTTGTCCGACATCTTCAACGGGGCGGTCAACTACATCCGGCGTAATCCGAAGGCCAC CCTCGGCCTGACCGCCATCGTGGTCGTCGCCGCCCAGCTCATCTCGCTCGTGCTGCAGATCCTGGGCCCGCTGATCGCCA CCGGCGACCTCGACCCCACCCTGAGCGGGGAGGCCGGCGCCGGCGACGTCGCCGTACTGTCCGGATCCTCACTGGCCGGC TCCATCACCACCGCGCTGGCCTCGGTGGTGCTCAGCGGGATGCTCACCGTCATCGTGGGCCGCGCGGTGTTCGGCGCCGA CATCACCATCGGGGAGGCGTGGCAGCGGGTGAAGGGCAGGCTGCTCGCACTGCTCGGCTTCACCGCCCTCGAGGCCGTGG CCGTCCTGCTGCTGATCGTGGTCGTCGTGGTGGCGATCATCGCGGCCGAGGCGATCGGCGGCGGTGTCGCCGCCTTCCTC GTCGGCGCACCGCTGGTCATCGCCGCGTTCCTGCTGATCGTCTACGTCGCCACCTCGCTGGTGTTCACCCCCGCACTGAT CGTCCTGGAACGCCTCGGCATCGTCGAAGCGGCGGGGCGCTCGTTCACGCTGGTGAAGAGGGACTTCTGGCGAGTCCTCG GCATCTGGATCCTGGCCGCGCTCGCCGCGGCCGTGATCGCGGGCGCCGTCGGGGTCCCGTTCAGCCTCGGTGGACAACTC TTGGCCGGGTCCGGCTCCGACGGCGGGGTGCTGGTGGGTCTCATCCTCATCGCGGTCGGCGCGGCGATCGGACAGATCCT CACCGCCCCGTTCAGCGCGGGAGTCATCGTCCTGCTCTACACCGACCGCAGGATCCGGGCGGAGGCCTTCGACCTGGTGC TGCACACCGGTGCGGCGGCCGGCCCCGGCGTCCCCGCCGACTCGACCGACCATCTGTGGCTGACCCGCCGCCCGTGA
Upstream 100 bases:
>100_bases TTCCGCCATGTCATCGAAACTACGCCGGTGCCGTCTTCCGCTCGGCCCGTCGCGCGCAAACACGGGGGCCACGTTGTCAA TTGGCTTGGTGATCGACAGG
Downstream 100 bases:
>100_bases CGTGCCGACCGTAGACATCGATCGGGACGCCGCGCACGAGGCCGCCCAGAAAGAACTCGACAAGCCGATCTACCCGCGGG CGTCGCTGACCGACCGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MVPMSNDAGGPGRGYPPPGYQQGYPPPGYQQGYPPPGYQQGYPPPGYQHGYPPPGYQHGYPPPGYPPQQGYAPPDVIKPG VIPLRPLGLSDIFNGAVNYIRRNPKATLGLTAIVVVAAQLISLVLQILGPLIATGDLDPTLSGEAGAGDVAVLSGSSLAG SITTALASVVLSGMLTVIVGRAVFGADITIGEAWQRVKGRLLALLGFTALEAVAVLLLIVVVVVAIIAAEAIGGGVAAFL VGAPLVIAAFLLIVYVATSLVFTPALIVLERLGIVEAAGRSFTLVKRDFWRVLGIWILAALAAAVIAGAVGVPFSLGGQL LAGSGSDGGVLVGLILIAVGAAIGQILTAPFSAGVIVLLYTDRRIRAEAFDLVLHTGAAAGPGVPADSTDHLWLTRRP
Sequences:
>Translated_398_residues MVPMSNDAGGPGRGYPPPGYQQGYPPPGYQQGYPPPGYQQGYPPPGYQHGYPPPGYQHGYPPPGYPPQQGYAPPDVIKPG VIPLRPLGLSDIFNGAVNYIRRNPKATLGLTAIVVVAAQLISLVLQILGPLIATGDLDPTLSGEAGAGDVAVLSGSSLAG SITTALASVVLSGMLTVIVGRAVFGADITIGEAWQRVKGRLLALLGFTALEAVAVLLLIVVVVVAIIAAEAIGGGVAAFL VGAPLVIAAFLLIVYVATSLVFTPALIVLERLGIVEAAGRSFTLVKRDFWRVLGIWILAALAAAVIAGAVGVPFSLGGQL LAGSGSDGGVLVGLILIAVGAAIGQILTAPFSAGVIVLLYTDRRIRAEAFDLVLHTGAAAGPGVPADSTDHLWLTRRP >Mature_398_residues MVPMSNDAGGPGRGYPPPGYQQGYPPPGYQQGYPPPGYQQGYPPPGYQHGYPPPGYQHGYPPPGYPPQQGYAPPDVIKPG VIPLRPLGLSDIFNGAVNYIRRNPKATLGLTAIVVVAAQLISLVLQILGPLIATGDLDPTLSGEAGAGDVAVLSGSSLAG SITTALASVVLSGMLTVIVGRAVFGADITIGEAWQRVKGRLLALLGFTALEAVAVLLLIVVVVVAIIAAEAIGGGVAAFL VGAPLVIAAFLLIVYVATSLVFTPALIVLERLGIVEAAGRSFTLVKRDFWRVLGIWILAALAAAVIAGAVGVPFSLGGQL LAGSGSDGGVLVGLILIAVGAAIGQILTAPFSAGVIVLLYTDRRIRAEAFDLVLHTGAAAGPGVPADSTDHLWLTRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40625; Mature: 40625
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPMSNDAGGPGRGYPPPGYQQGYPPPGYQQGYPPPGYQQGYPPPGYQHGYPPPGYQHGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPGYPPQQGYAPPDVIKPGVIPLRPLGLSDIFNGAVNYIRRNPKATLGLTAIVVVAAQL CCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ISLVLQILGPLIATGDLDPTLSGEAGAGDVAVLSGSSLAGSITTALASVVLSGMLTVIVG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH RAVFGADITIGEAWQRVKGRLLALLGFTALEAVAVLLLIVVVVVAIIAAEAIGGGVAAFL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VGAPLVIAAFLLIVYVATSLVFTPALIVLERLGIVEAAGRSFTLVKRDFWRVLGIWILAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH LAAAVIAGAVGVPFSLGGQLLAGSGSDGGVLVGLILIAVGAAIGQILTAPFSAGVIVLLY HHHHHHHHHHCCCHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE TDRRIRAEAFDLVLHTGAAAGPGVPADSTDHLWLTRRP CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC >Mature Secondary Structure MVPMSNDAGGPGRGYPPPGYQQGYPPPGYQQGYPPPGYQQGYPPPGYQHGYPPPGYQHGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPGYPPQQGYAPPDVIKPGVIPLRPLGLSDIFNGAVNYIRRNPKATLGLTAIVVVAAQL CCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ISLVLQILGPLIATGDLDPTLSGEAGAGDVAVLSGSSLAGSITTALASVVLSGMLTVIVG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH RAVFGADITIGEAWQRVKGRLLALLGFTALEAVAVLLLIVVVVVAIIAAEAIGGGVAAFL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH VGAPLVIAAFLLIVYVATSLVFTPALIVLERLGIVEAAGRSFTLVKRDFWRVLGIWILAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH LAAAVIAGAVGVPFSLGGQLLAGSGSDGGVLVGLILIAVGAAIGQILTAPFSAGVIVLLY HHHHHHHHHHCCCHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE TDRRIRAEAFDLVLHTGAAAGPGVPADSTDHLWLTRRP CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA