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The map label for this gene is kstR [H]

Identifier: 119870954

GI number: 119870954

Start: 5162106

End: 5162777

Strand: Direct

Name: kstR [H]

Synonym: Mkms_4927

Alternate gene names: 119870954

Gene position: 5162106-5162777 (Clockwise)

Preceding gene: 119870953

Following gene: 119870955

Centisome position: 89.98

GC content: 67.26

Gene sequence:

>672_bases
ATGAGTGTCGCCAGCACTCGCGTGAGCAGCAATCCCGCACAGAATCAGGGCAGTTCAGCTGCCGACCAGGTCCACGCAGC
TGAGGTGCCGCGTTCGCGTGCCTCAGCGCGTCGCCGCGAAGCGATCATGGATGCCGCGCTGGCTGTTGCTGCCACGGGCG
GTTACGACGCGGTCCACATGCGGACAGTCGCCGAGCGAGTCGGTATCGCCGTGGGCACTCTATACCGCTATTACCCCGCC
AAAACCCACCTGCTGGTGGCAGCGCTGACCCGAGAATTTCAGCGCCTCGACGTCTCCGGCGACTGGTCAAGCGGTGCCGG
CACACCGCAACAGCGATTGGATCGACTGACCGCCCACCTACACGACCGGTGGCAGCGCGACCCGCTGCTGACCGACGCCA
TGACCCGGGCCTTCGCCGTTGCCGACACCCGCGCCGCTGCGGAGCTCGACCGCGCCGCCGCAACGATCGAAATCCTGCTG
GCCCGCACCCTCGGAGGTGGCGAGCCGACACCGGCAGATCTGTGTGTCGCCGGCGTTATCTCCGACATCTGGCTGGCCAA
CCTCGTTGCCTTCATCAGTGGGCGCGTGTCGGCAGCCGATACCCGCGACCGTATCGACCGGGCCACCCGCAGAGTCATCG
ACAGGGCGGCCCCGAGCACAACCGCACCGTAA

Upstream 100 bases:

>100_bases
TGGTCGACACCGCGCATTTCGCCGCTCACGGCGACGTCAGCGGTTTCGGTGAGATCTTCGAGCAGCTCTCGCGCCGCAGC
GGCGTCAACGGCCAAACGCC

Downstream 100 bases:

>100_bases
CGCTACTTCTGGTATCGCAGCGATACCTGTCGTACTCTTCAGGTACGGCTCAACGATGCGTCGAAGGAGAAGGCCATGTA
CACCCAATGGATTGAAGACT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSVASTRVSSNPAQNQGSSAADQVHAAEVPRSRASARRREAIMDAALAVAATGGYDAVHMRTVAERVGIAVGTLYRYYPA
KTHLLVAALTREFQRLDVSGDWSSGAGTPQQRLDRLTAHLHDRWQRDPLLTDAMTRAFAVADTRAAAELDRAAATIEILL
ARTLGGGEPTPADLCVAGVISDIWLANLVAFISGRVSAADTRDRIDRATRRVIDRAAPSTTAP

Sequences:

>Translated_223_residues
MSVASTRVSSNPAQNQGSSAADQVHAAEVPRSRASARRREAIMDAALAVAATGGYDAVHMRTVAERVGIAVGTLYRYYPA
KTHLLVAALTREFQRLDVSGDWSSGAGTPQQRLDRLTAHLHDRWQRDPLLTDAMTRAFAVADTRAAAELDRAAATIEILL
ARTLGGGEPTPADLCVAGVISDIWLANLVAFISGRVSAADTRDRIDRATRRVIDRAAPSTTAP
>Mature_222_residues
SVASTRVSSNPAQNQGSSAADQVHAAEVPRSRASARRREAIMDAALAVAATGGYDAVHMRTVAERVGIAVGTLYRYYPAK
THLLVAALTREFQRLDVSGDWSSGAGTPQQRLDRLTAHLHDRWQRDPLLTDAMTRAFAVADTRAAAELDRAAATIEILLA
RTLGGGEPTPADLCVAGVISDIWLANLVAFISGRVSAADTRDRIDRATRRVIDRAAPSTTAP

Specific function: Controls the expression of genes used for utilizing diverse lipids as energy sources [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23812; Mature: 23681

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVASTRVSSNPAQNQGSSAADQVHAAEVPRSRASARRREAIMDAALAVAATGGYDAVHM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RTVAERVGIAVGTLYRYYPAKTHLLVAALTREFQRLDVSGDWSSGAGTPQQRLDRLTAHL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
HDRWQRDPLLTDAMTRAFAVADTRAAAELDRAAATIEILLARTLGGGEPTPADLCVAGVI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SDIWLANLVAFISGRVSAADTRDRIDRATRRVIDRAAPSTTAP
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SVASTRVSSNPAQNQGSSAADQVHAAEVPRSRASARRREAIMDAALAVAATGGYDAVHM
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RTVAERVGIAVGTLYRYYPAKTHLLVAALTREFQRLDVSGDWSSGAGTPQQRLDRLTAHL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
HDRWQRDPLLTDAMTRAFAVADTRAAAELDRAAATIEILLARTLGGGEPTPADLCVAGVI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SDIWLANLVAFISGRVSAADTRDRIDRATRRVIDRAAPSTTAP
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA