| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119870894
Identifier: 119870894
GI number: 119870894
Start: 5094249
End: 5094770
Strand: Direct
Name: 119870894
Synonym: Mkms_4866
Alternate gene names: NA
Gene position: 5094249-5094770 (Clockwise)
Preceding gene: 119870893
Following gene: 119870895
Centisome position: 88.79
GC content: 66.86
Gene sequence:
>522_bases ATGCTGATGCACCAGGGCATTGGCCTCGCGGCCTACAACGCCATGCCGATCCGCCGGGCCGTCCATGCGGTGTACGAATG CTGCTGCAGCGTGTCACTGGCCGCCGATCTGGCCCGCGACCGGCCCTACGAGAACCACGACGCCCTGTTCCGCAAGGCTG ATGAGCTGCTCTTCGGCCTGTCCGAGGATTCCATCGACTCGATCCTGCAGGCCTACCCGGACGTCGGCCGCCGAGCCGGC AGCACCAAGTCGGCCGCCGAGCAGTGCGCGGTGTTCGACGAGCGGCCCGAGGTGATGGAGCGGCTGAGCGCGGCCTCGCA CCGCTATCGGGAGCACTTCGGCTTCGGCTTCGTCATGTATGTCAACGGGTACTGCGCACAGGATGTGCTGGCGGCCCTGA CCGACCGCCTGCTCAACGACTACGAGACCGAGCGCAAGGTCGTGCGCAACGAACTCGCCCGGATCAACCGGATCCGGCTC GAACGGATGCTCGGCCCCGAAGGCGGCTACCACAACTGGTGA
Upstream 100 bases:
>100_bases GAACGGTTCGAGGCCGAAGGCCACTAGCCCGGCCACCGAAATTATCGCGCCCGTAACACGGCGTAACGCGGTCGTGGCTT GAGGCTCCGATCATTGGCCC
Downstream 100 bases:
>100_bases GTTCCTCGCCTACGCTGCGCGGGTGAGCACCGCGCATTCACATTTCCTTGCACTGCCCGATCTGGCCTCCCGCGCGGCCG GCGCCGCCGTCGTGTGGGCC
Product: putative OHCU decarboxylase
Products: NA
Alternate protein names: Allantoicase; Oxo-4-Hydroxy-4-Carboxy-5-Ureidoimidazoline Decarboxylase
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MLMHQGIGLAAYNAMPIRRAVHAVYECCCSVSLAADLARDRPYENHDALFRKADELLFGLSEDSIDSILQAYPDVGRRAG STKSAAEQCAVFDERPEVMERLSAASHRYREHFGFGFVMYVNGYCAQDVLAALTDRLLNDYETERKVVRNELARINRIRL ERMLGPEGGYHNW
Sequences:
>Translated_173_residues MLMHQGIGLAAYNAMPIRRAVHAVYECCCSVSLAADLARDRPYENHDALFRKADELLFGLSEDSIDSILQAYPDVGRRAG STKSAAEQCAVFDERPEVMERLSAASHRYREHFGFGFVMYVNGYCAQDVLAALTDRLLNDYETERKVVRNELARINRIRL ERMLGPEGGYHNW >Mature_173_residues MLMHQGIGLAAYNAMPIRRAVHAVYECCCSVSLAADLARDRPYENHDALFRKADELLFGLSEDSIDSILQAYPDVGRRAG STKSAAEQCAVFDERPEVMERLSAASHRYREHFGFGFVMYVNGYCAQDVLAALTDRLLNDYETERKVVRNELARINRIRL ERMLGPEGGYHNW
Specific function: Unknown
COG id: COG3195
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19648; Mature: 19648
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMHQGIGLAAYNAMPIRRAVHAVYECCCSVSLAADLARDRPYENHDALFRKADELLFGL CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC SEDSIDSILQAYPDVGRRAGSTKSAAEQCAVFDERPEVMERLSAASHRYREHFGFGFVMY CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHH VNGYCAQDVLAALTDRLLNDYETERKVVRNELARINRIRLERMLGPEGGYHNW HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLMHQGIGLAAYNAMPIRRAVHAVYECCCSVSLAADLARDRPYENHDALFRKADELLFGL CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC SEDSIDSILQAYPDVGRRAGSTKSAAEQCAVFDERPEVMERLSAASHRYREHFGFGFVMY CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHH VNGYCAQDVLAALTDRLLNDYETERKVVRNELARINRIRLERMLGPEGGYHNW HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA