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The map label for this gene is yejH [C]

Identifier: 119870601

GI number: 119870601

Start: 4802170

End: 4803819

Strand: Direct

Name: yejH [C]

Synonym: Mkms_4572

Alternate gene names: 119870601

Gene position: 4802170-4803819 (Clockwise)

Preceding gene: 119870600

Following gene: 119870603

Centisome position: 83.7

GC content: 67.88

Gene sequence:

>1650_bases
ATGACCGACGGCCCATTGATCGTGCAGTCCGACAAGACGGTGCTGCTCGAGGTCGACCACGAACAGGCGCAGGCCGCCCG
CGCGGCGATCGCCCCGTTCGCCGAACTGGAGCGCGCACCGGAGCACATCCACACCTACCGCATCACCCCGCTGGCGCTGT
GGAACGCCCGCGCCGCAGGTCACGACGCCGAGCAGGTGGTCGATGCGCTGGTGTCGTTCTCCCGCTACGCCGTCCCGCAA
CCCCTGTTGGTCGACATCGTCGACACCATGGCCCGCTACGGCCGGCTGCAGCTGGTGAAGAGCCCGGTGCACGGGCTGGT
GCTGGTCAGCCTCGACCGCGCGGTGCTCGAAGAGGTGCTCCGCAACAAGAAGATCGCCCCGATGCTGGGCGCCCGCATCG
ACGACGACACGGTGATCGTGCACGCCAGCGAGCGCGGCCGGGTCAAGCAGATGCTGCTCAAGATCGGCTGGCCGGCCGAG
GACCTCGCCGGCTACGTCGACGGTGAGCGGCACCCGATCGATCTGCTGCAGGACGGTTGGCAGCTGCGCGACTACCAGGA
GATGGCCGCCGATTCGTTCTGGTCGGGCGGCTCCGGTGTGGTGGTGCTGCCGTGTGGTGCGGGCAAGACGCTGGTGGGCG
CCGCGGCGATGGCCAAGGCCGGCGCGACCACGCTCATCCTCGTCACCAACACCGTCGCGGGCCGGCAGTGGAAACGCGAA
CTGGTCGCGCGCACGTCGCTGACCGAGGACGAGATCGGCGAGTACTCCGGGGAGAAGAAGGAGATCCGGCCGGTCACGAT
CGCCACGTATCAGGTGATCACCCGGCGCACCAAGGGCGAGTACCGCCACCTCGAACTGTTCGACAGCCGCGACTGGGGGC
TGATCATCTACGACGAGGTGCACCTGCTGCCCGCACCGGTCTTCCGGATGACCGCGGACCTGCAGTCGCGCCGCCGGCTG
GGGTTGACCGCCACGCTGATCCGTGAGGACGGCCGCGAGGGCGACGTGTTCAGCCTGATCGGGCCGAAGCGCTACGACGC
GCCGTGGAAGGACATCGAGGCCCAGGGCTGGATCGCGCCGGCCGAGTGCATCGAGGTGCGGGTGACGATGACCGACAACG
AGCGCATGCTCTACGCCGTCGCCGAACCCGAGGAGCGCTACAAATTGTGCTCGACGGTGCACACCAAGATCGCGGTGGTG
CGCTCGATCCTGGAGCGCCACAAGGGTGAGCAGACGCTGGTGATCGGCGCCTATCTCGATCAGCTGGAGGAGTTGGGGCA
GGAACTGGACGCCCCGGTGATCCAGGGGTCGACGAAGAACGCGGAGCGCGAGCTGCTGTTCGACCAGTTCCGCCGTGGTG
AGATCTCGACGCTGGTGGTCTCGAAGGTCGCGAACTTCTCCATCGATCTACCGGAAGCCTCTGTGGCCGTTCAGGTCTCG
GGCACCTTCGGCTCGCGGCAGGAAGAAGCGCAACGGCTGGGCCGGCTGCTGCGGCCCAAACACGACGGCGGCGGTGCGGT
GTTCTACTCGGTGGTCTCGCGCGACAGCCTCGACGCCGAATACGCCGCGCACCGGCAGCGGTTCCTCGCCGAGCAGGGCT
ACGGCTACGTCATCAAGGACGCCGACGATCTGTTGGGACCCGCGATCTAG

Upstream 100 bases:

>100_bases
TCCGGCATCCGGGCGGGTGCGCGAATTCGCGATTCACCGCGTTACCTCGGTGGTGTCGGCCGAGAACGAATAATGGAGCG
ATGAGCTCCAGGGGAGAAGC

Downstream 100 bases:

>100_bases
ACACGCGTCCTGATCAAAGGATGTCCTTCTCCGCATCGGCCAGCGCGGCGAATTCCTCGTCGGGCGAGTTGGCCACCAGG
TGGTGGCGGCTGTAGAGGCC

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: DNA Repair Helicase; Type III Restriction Res Subunit; Helicase Domain Protein; Helicase Domain-Containing Protein; ATP-Dependent DNA Helicase; DNA Repair Helicase RAD; DNA Repair Helicase Rad; Superfamily II DNA/RNA Helicase; DNA/RNA Helicase; Type III Restriction Res Subunit Family; DNA Repair Protein Rad; Helicase; DNA Helicase; DNA Repair Protein; DNA/RNA Helicase Superfamily II; DNA Repair Protein RAD; Helicase-Like Protein; Helicase Protein; ATP-Dependent Helicase; DNA Or RNA Helicase Of Superfamily II; Helicase ATP-Dependent; Helicase DNA Repair; DNA Or RNA Helicase; Helicase DNA Repair Rad; RAD25-Type DNA Repair Helicase; DNA Repair Related Protein; Restriction Endonuclease Family Protein; XPB/RAD25-Related Helicase; Helicase ATP-Dependent Intein-Containing; DEAD/DEAH Box Helicase-Like; DNA-Helicase; DNA/RNA Repair Helicase; DNA Or RNA Helicase Of Superfamily Protein II; DEAD/DEAH Box Helicase

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MTDGPLIVQSDKTVLLEVDHEQAQAARAAIAPFAELERAPEHIHTYRITPLALWNARAAGHDAEQVVDALVSFSRYAVPQ
PLLVDIVDTMARYGRLQLVKSPVHGLVLVSLDRAVLEEVLRNKKIAPMLGARIDDDTVIVHASERGRVKQMLLKIGWPAE
DLAGYVDGERHPIDLLQDGWQLRDYQEMAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LVARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPVFRMTADLQSRRRL
GLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVRVTMTDNERMLYAVAEPEERYKLCSTVHTKIAVV
RSILERHKGEQTLVIGAYLDQLEELGQELDAPVIQGSTKNAERELLFDQFRRGEISTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKDADDLLGPAI

Sequences:

>Translated_549_residues
MTDGPLIVQSDKTVLLEVDHEQAQAARAAIAPFAELERAPEHIHTYRITPLALWNARAAGHDAEQVVDALVSFSRYAVPQ
PLLVDIVDTMARYGRLQLVKSPVHGLVLVSLDRAVLEEVLRNKKIAPMLGARIDDDTVIVHASERGRVKQMLLKIGWPAE
DLAGYVDGERHPIDLLQDGWQLRDYQEMAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LVARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPVFRMTADLQSRRRL
GLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVRVTMTDNERMLYAVAEPEERYKLCSTVHTKIAVV
RSILERHKGEQTLVIGAYLDQLEELGQELDAPVIQGSTKNAERELLFDQFRRGEISTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKDADDLLGPAI
>Mature_548_residues
TDGPLIVQSDKTVLLEVDHEQAQAARAAIAPFAELERAPEHIHTYRITPLALWNARAAGHDAEQVVDALVSFSRYAVPQP
LLVDIVDTMARYGRLQLVKSPVHGLVLVSLDRAVLEEVLRNKKIAPMLGARIDDDTVIVHASERGRVKQMLLKIGWPAED
LAGYVDGERHPIDLLQDGWQLRDYQEMAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKREL
VARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPVFRMTADLQSRRRLG
LTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVRVTMTDNERMLYAVAEPEERYKLCSTVHTKIAVVR
SILERHKGEQTLVIGAYLDQLEELGQELDAPVIQGSTKNAERELLFDQFRRGEISTLVVSKVANFSIDLPEASVAVQVSG
TFGSRQEEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKDADDLLGPAI

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4557563, Length=375, Percent_Identity=36.2666666666667, Blast_Score=237, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17556358, Length=385, Percent_Identity=35.0649350649351, Blast_Score=233, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6322048, Length=605, Percent_Identity=30.0826446280992, Blast_Score=271, Evalue=2e-73,
Organism=Drosophila melanogaster, GI221331068, Length=375, Percent_Identity=35.4666666666667, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24662247, Length=375, Percent_Identity=35.4666666666667, Blast_Score=234, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60964; Mature: 60833

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDGPLIVQSDKTVLLEVDHEQAQAARAAIAPFAELERAPEHIHTYRITPLALWNARAAG
CCCCCEEEECCCEEEEEECCHHHHHHHHHHCCHHHHHCCHHHHHEEEECEEEEECCCCCC
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLVLVSLDRAVLEEVL
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEECCCCCEEEEEEHHHHHHHHHH
RNKKIAPMLGARIDDDTVIVHASERGRVKQMLLKIGWPAEDLAGYVDGERHPIDLLQDGW
HCCCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHCCC
QLRDYQEMAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
CCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHH
LVARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDEV
HHHHHCCCHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEEECCCCCCEEEEECC
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
AECIEVRVTMTDNERMLYAVAEPEERYKLCSTVHTKIAVVRSILERHKGEQTLVIGAYLD
CCEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHH
QLEELGQELDAPVIQGSTKNAERELLFDQFRRGEISTLVVSKVANFSIDLPEASVAVQVS
HHHHHHHHCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCEEEEEEE
GTFGSRQEEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKD
CCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHCCCCEEEEC
ADDLLGPAI
CHHHCCCCC
>Mature Secondary Structure 
TDGPLIVQSDKTVLLEVDHEQAQAARAAIAPFAELERAPEHIHTYRITPLALWNARAAG
CCCCEEEECCCEEEEEECCHHHHHHHHHHCCHHHHHCCHHHHHEEEECEEEEECCCCCC
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLVLVSLDRAVLEEVL
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEECCCCCEEEEEEHHHHHHHHHH
RNKKIAPMLGARIDDDTVIVHASERGRVKQMLLKIGWPAEDLAGYVDGERHPIDLLQDGW
HCCCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHCCC
QLRDYQEMAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
CCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHH
LVARTSLTEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDEV
HHHHHCCCHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEEECCCCCCEEEEECC
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
AECIEVRVTMTDNERMLYAVAEPEERYKLCSTVHTKIAVVRSILERHKGEQTLVIGAYLD
CCEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHH
QLEELGQELDAPVIQGSTKNAERELLFDQFRRGEISTLVVSKVANFSIDLPEASVAVQVS
HHHHHHHHCCCCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCEEEEEEE
GTFGSRQEEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKD
CCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHCCCCEEEEC
ADDLLGPAI
CHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA