| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870588
Identifier: 119870588
GI number: 119870588
Start: 4790877
End: 4792577
Strand: Direct
Name: 119870588
Synonym: Mkms_4559
Alternate gene names: NA
Gene position: 4790877-4792577 (Clockwise)
Preceding gene: 119870586
Following gene: 119870589
Centisome position: 83.51
GC content: 71.02
Gene sequence:
>1701_bases ATGGTGGACAATCGTGGCGTGGCCGGCGGACGCGATGAGAGTGACGGGGATCCCGAGGATTTCCGACGCGACGCCCGGTA CTACCCGCCCCGGCCGCCCGCGGGCCACGACCACCCCGGCATGGCGAACTACCCCAGCGACGGCGGTACCTACCGGCGTC CACGCAGGCAGCCGACGCCGAGCGCGAACCGCTGGCTGCCGCCGCTGGACGAGCCGACGCCCTCGGGGTACCAGTACGAC CCACCGCCCGGTGTGGGTGCGGGCGCAGGGCGGGTCACCGTCACCCGCGCCGCGGCGCAGCGCAGCCGCGAGATGGGGTC GAAGATGTACGGCCTGGTGCACCGGGCCGCGACCGCCGACGGGGCGGACAAGTCCGGGCTGACGGCGCTCACCTGGCCGG TGGTGGCCAACTTCGCCGTCGACGCCGCCATGGCGGTGGCGTTGGCGAACACGTTGTTCTTCGCCGCCGCGAGCGGGGAG AGCAAGAGCAAGGTCGCGCTGTACCTGCTGATCACGATCGCGCCGTTCGCGGTGATCGCACCGCTCATCGGCCCGGCGCT CGACCGCCTGCAACATGGCCGCCGCGTCGCGTTGGCCGCCTCGTTCCTGGCGCGCACGGCGCTGGTGGTGCTGCTGATCG CGAACTACGACGGCGAGACGGGCAGCTACCAGTCGTGGGTGCTCTACCCGTGCGCGCTCGGGATGATGGTGCTGTCGAAA TCGTTCTCGGTGCTGCGCAGCGCCGTCACCCCGCGGGTGCTGCCCCCGAGCATCGACCTGGTGCGGGTGAATTCCCGGCT CACGACGTTCGGCCTGTTGGGTGGCACCGTGGTCGGTGGCGCGTTCGCCGCCGGGGCGGAGTATCTGCTCAACCTTTTCC ACCTGCCCGGTGCGCTGTACGTGATCGTCGCTGCGACCATCGCGGGCGCGGCGCTGTCGATGCACATCCCGAAATGGGTC GAGGTCACCGCGGGTGAGGTGCCGGCGACATTGAGTTATCACGGCGGCAGCGGCGGTCTGCGACGTGAGCGGCCGTCCGA GCGGTCCGGCAAGGCGCGCCAGCCGCTGGGCCGTAACACCATCACCGCGCTGTGGGGCAACTGCACGATCAAGGTGATGG TCGGGTTCCTGTTCCTCTACCCGGCGTTCGTGGCGAAGTCGCACGACGCCACCGGCTGGGAGCAGCTGCGCATCCTCGGC CTGATCGGCGCCGCGGCCGCCGTCGGCAACTTCGCCGGCAACATGACCGCCGCGCGGCTCGAACTGGGCCACCCGGCGCG GCTGGTCGTACGCGCGGCCACCGCGGTGACCGCCGTCGCGCTGCTGACCGCGGTCACCGGGAACCTGCTGGTGGCAGCGG TGGCCACGCTGATCACCTCCGGCGCCAGCGCGATCGCCAAGGCGTCGCTGGATGCGTCGCTTCAGGACGACCTGCCCGAG GAGTCCAGGGCCTCGGCGTTCGGCCGTTCGGAGTCACTGCTGCAGCTGGCGTGGGTCGCCGGCGGCGCCACCGGGGTGCT CATCTACACCGACCTGTGGATCGGCTTCACTACGATCACCGCCGTGCTGATTCTCGGTCTGGCCCAGACGGTCGTGAGCT ACCGCGGCGAATCGCTGATTCCGGGCTTGGGTGGCAACCGCCCGGTGCTGGCCGAACAGGAAGGCCGTCGCTCCGACGCC GCCGGGGTGGGTTACGAGTGA
Upstream 100 bases:
>100_bases GTCGGCGGCGGTGTCGGTCAGGCTGTCCATCGCATCCCATAGTGCCGCAGAGCGATACCGGAAAGCCACACCGGTCGGCT GTCAACCGTCAGTCGGTGCC
Downstream 100 bases:
>100_bases AACGCGTAGTGGCCGTGCTGGCGGCCGTCGCGGTGCTGGCGACTGCGGCCACGGCGTTCATGGTGTGGCGGCTGACCCGC GACCACGACCCGGACCTGCC
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MVDNRGVAGGRDESDGDPEDFRRDARYYPPRPPAGHDHPGMANYPSDGGTYRRPRRQPTPSANRWLPPLDEPTPSGYQYD PPPGVGAGAGRVTVTRAAAQRSREMGSKMYGLVHRAATADGADKSGLTALTWPVVANFAVDAAMAVALANTLFFAAASGE SKSKVALYLLITIAPFAVIAPLIGPALDRLQHGRRVALAASFLARTALVVLLIANYDGETGSYQSWVLYPCALGMMVLSK SFSVLRSAVTPRVLPPSIDLVRVNSRLTTFGLLGGTVVGGAFAAGAEYLLNLFHLPGALYVIVAATIAGAALSMHIPKWV EVTAGEVPATLSYHGGSGGLRRERPSERSGKARQPLGRNTITALWGNCTIKVMVGFLFLYPAFVAKSHDATGWEQLRILG LIGAAAAVGNFAGNMTAARLELGHPARLVVRAATAVTAVALLTAVTGNLLVAAVATLITSGASAIAKASLDASLQDDLPE ESRASAFGRSESLLQLAWVAGGATGVLIYTDLWIGFTTITAVLILGLAQTVVSYRGESLIPGLGGNRPVLAEQEGRRSDA AGVGYE
Sequences:
>Translated_566_residues MVDNRGVAGGRDESDGDPEDFRRDARYYPPRPPAGHDHPGMANYPSDGGTYRRPRRQPTPSANRWLPPLDEPTPSGYQYD PPPGVGAGAGRVTVTRAAAQRSREMGSKMYGLVHRAATADGADKSGLTALTWPVVANFAVDAAMAVALANTLFFAAASGE SKSKVALYLLITIAPFAVIAPLIGPALDRLQHGRRVALAASFLARTALVVLLIANYDGETGSYQSWVLYPCALGMMVLSK SFSVLRSAVTPRVLPPSIDLVRVNSRLTTFGLLGGTVVGGAFAAGAEYLLNLFHLPGALYVIVAATIAGAALSMHIPKWV EVTAGEVPATLSYHGGSGGLRRERPSERSGKARQPLGRNTITALWGNCTIKVMVGFLFLYPAFVAKSHDATGWEQLRILG LIGAAAAVGNFAGNMTAARLELGHPARLVVRAATAVTAVALLTAVTGNLLVAAVATLITSGASAIAKASLDASLQDDLPE ESRASAFGRSESLLQLAWVAGGATGVLIYTDLWIGFTTITAVLILGLAQTVVSYRGESLIPGLGGNRPVLAEQEGRRSDA AGVGYE >Mature_566_residues MVDNRGVAGGRDESDGDPEDFRRDARYYPPRPPAGHDHPGMANYPSDGGTYRRPRRQPTPSANRWLPPLDEPTPSGYQYD PPPGVGAGAGRVTVTRAAAQRSREMGSKMYGLVHRAATADGADKSGLTALTWPVVANFAVDAAMAVALANTLFFAAASGE SKSKVALYLLITIAPFAVIAPLIGPALDRLQHGRRVALAASFLARTALVVLLIANYDGETGSYQSWVLYPCALGMMVLSK SFSVLRSAVTPRVLPPSIDLVRVNSRLTTFGLLGGTVVGGAFAAGAEYLLNLFHLPGALYVIVAATIAGAALSMHIPKWV EVTAGEVPATLSYHGGSGGLRRERPSERSGKARQPLGRNTITALWGNCTIKVMVGFLFLYPAFVAKSHDATGWEQLRILG LIGAAAAVGNFAGNMTAARLELGHPARLVVRAATAVTAVALLTAVTGNLLVAAVATLITSGASAIAKASLDASLQDDLPE ESRASAFGRSESLLQLAWVAGGATGVLIYTDLWIGFTTITAVLILGLAQTVVSYRGESLIPGLGGNRPVLAEQEGRRSDA AGVGYE
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0876c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 59205; Mature: 59205
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDNRGVAGGRDESDGDPEDFRRDARYYPPRPPAGHDHPGMANYPSDGGTYRRPRRQPTP CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SANRWLPPLDEPTPSGYQYDPPPGVGAGAGRVTVTRAAAQRSREMGSKMYGLVHRAATAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCC GADKSGLTALTWPVVANFAVDAAMAVALANTLFFAAASGESKSKVALYLLITIAPFAVIA CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEHHHHHHHHHHHH PLIGPALDRLQHGRRVALAASFLARTALVVLLIANYDGETGSYQSWVLYPCALGMMVLSK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEHHHHHHHHHHHHH SFSVLRSAVTPRVLPPSIDLVRVNSRLTTFGLLGGTVVGGAFAAGAEYLLNLFHLPGALY HHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VIVAATIAGAALSMHIPKWVEVTAGEVPATLSYHGGSGGLRRERPSERSGKARQPLGRNT HHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC ITALWGNCTIKVMVGFLFLYPAFVAKSHDATGWEQLRILGLIGAAAAVGNFAGNMTAARL HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE ELGHPARLVVRAATAVTAVALLTAVTGNLLVAAVATLITSGASAIAKASLDASLQDDLPE ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCC ESRASAFGRSESLLQLAWVAGGATGVLIYTDLWIGFTTITAVLILGLAQTVVSYRGESLI HHHHHHCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PGLGGNRPVLAEQEGRRSDAAGVGYE CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVDNRGVAGGRDESDGDPEDFRRDARYYPPRPPAGHDHPGMANYPSDGGTYRRPRRQPTP CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SANRWLPPLDEPTPSGYQYDPPPGVGAGAGRVTVTRAAAQRSREMGSKMYGLVHRAATAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCC GADKSGLTALTWPVVANFAVDAAMAVALANTLFFAAASGESKSKVALYLLITIAPFAVIA CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEHHHHHHHHHHHH PLIGPALDRLQHGRRVALAASFLARTALVVLLIANYDGETGSYQSWVLYPCALGMMVLSK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEHHHHHHHHHHHHH SFSVLRSAVTPRVLPPSIDLVRVNSRLTTFGLLGGTVVGGAFAAGAEYLLNLFHLPGALY HHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VIVAATIAGAALSMHIPKWVEVTAGEVPATLSYHGGSGGLRRERPSERSGKARQPLGRNT HHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC ITALWGNCTIKVMVGFLFLYPAFVAKSHDATGWEQLRILGLIGAAAAVGNFAGNMTAARL HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE ELGHPARLVVRAATAVTAVALLTAVTGNLLVAAVATLITSGASAIAKASLDASLQDDLPE ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCC ESRASAFGRSESLLQLAWVAGGATGVLIYTDLWIGFTTITAVLILGLAQTVVSYRGESLI HHHHHHCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PGLGGNRPVLAEQEGRRSDAAGVGYE CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]