Click here to switch to the map view.

The map label for this gene is 119870568

Identifier: 119870568

GI number: 119870568

Start: 4773659

End: 4775158

Strand: Direct

Name: 119870568

Synonym: Mkms_4539

Alternate gene names: NA

Gene position: 4773659-4775158 (Clockwise)

Preceding gene: 119870567

Following gene: 119870569

Centisome position: 83.2

GC content: 71.07

Gene sequence:

>1500_bases
TTGGTCGCCGCCGCCTACCTCGCGCGCGCCGGCCGCCGGGTCCAGATGCTCGAGCGGCTCGACCACGTCGGCGGGGCCGC
GGTGTCGGCGCATGCGTTCGACGGTGTGGACGCCCGCCTGTCGCGCTACTCGTACCTGGTGAGCCTGCTGCCCAGACGCA
TCGTCGACGACCTCGGCGCGCGGATCCGCCTGGTCAAACGCCGCTACTCCTCCTACACGCCCGACCCGGCCACCGGCGGG
CACACCGGCCTGCTCATCGGCCCCACGAGCACCTTCGACGCGGTCGGCGCCGCCGCCGACGAGGCCGGTTTCACCGACTT
CTACCACCGCTTCCGCACCGTCACCGAACGCCTGTGGCCGACCCTGACCGCACCGCTGATGACCCGGGAGCAGATCCGAC
GGCATGTACTGTCCGGCGCCGACGACCAGGCGTGGCGGGCGGTCACCGAGACGCCCATCGGCGCGGCGATCACCGCGGCG
GCGCACAGCGATCTGGTGCGCGGGGTGATGGCCACCGACGCGCTGATCGGCACCTTCGCGCGCACCGACGATCCGTCGTT
GGTGCAGAACATCTGCTTCCTGTACCACCTGCTCGGCGGCGGTACCGGTGACTGGGACGTGCCGGTCGGCGGAATGGGCG
CGGTGAGTGGGGCGCTGGCCGCGGCGGCGGCCGGTTTCGGTGCCGAGATCACCACCGGCGCCGAGGTCACCGCCATCACG
CCCGACGGTGAGGTGACCTACTCGGCGGGCGGACGGGAGCACCGGGTGGGCGCCCGGTTCGTGCTGGCCAACGTCACCCC
GACCGTGCTGGCCGCGCTGCTGGACGAGCCGGCGCCGCCGTCCGCACCCGGTTCGCAGGTGAAGGTCAACCTGATGCTGC
GGCGGTTGCCGAAGCTGCGGGACCCGACGGTGACGGCCGAGCAGGCGTTCGGCGGGACGTTCCACATCAACGAGACACTG
AGCCAACTCGACGCCGCCCACGACCGGGCAGCGGCCGGTGAGGTCCCCCAGCCGCTGCCGTGCGAGATCTACTGCCACTC
GCTCAACGATCCGACGATCCTGTCCGACGAGCTGCGCGCCGCGGGTGCGCAGACGCTGACCGTGTTCGGACTGCACACCC
CGCATTCGCTGCTGGCGCACGGCGACGACGACCGGATGCGTAACACGCTGACCTCCGCGGTGCTCACGTCGCTCAATTCC
GTTCTGGCCGAACCGATTCACGATGTGGTGATGGAGGATGCCGCGGGCCGGCTCTGCATCGAGACGAAGACCACCACCGA
TCTGGAACACAGCCTGAACATGACCGGCGGCAACATCTTCCACGGTGGGCTGCAGTGGCCGTTCGCCGAGGCCGACGATC
CGCTGGACACCGCCGCGCAGCGTTGGGGCGTGGCCACCCGGCACCCTCGAATCCTGCTGTGCGGGTCGGGTTCCCGTCGC
GGCGGCGGGGTGTCCGGGATCGGCGGGCACAACGCGGCCATGGCTGTACTGGACAGCTGA

Upstream 100 bases:

>100_bases
ATCCGCGTGAGGCGGAGGTACGCCCGGCCGACGAGGTCGAGGGCTACCTGAACTGAGCTCCGCCTACGACGCGCTGATCG
TCGGGGGCGGCCACAACGGG

Downstream 100 bases:

>100_bases
GCGTACGCTGGCCTGCGTGAACGCCACCTGGATGCTCGCCGGGGTCACCGCGGCCGGCCTCGTGTTCGCCGCACCCGCCA
CCGCCTCGCCGAGTTACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MVAAAYLARAGRRVQMLERLDHVGGAAVSAHAFDGVDARLSRYSYLVSLLPRRIVDDLGARIRLVKRRYSSYTPDPATGG
HTGLLIGPTSTFDAVGAAADEAGFTDFYHRFRTVTERLWPTLTAPLMTREQIRRHVLSGADDQAWRAVTETPIGAAITAA
AHSDLVRGVMATDALIGTFARTDDPSLVQNICFLYHLLGGGTGDWDVPVGGMGAVSGALAAAAAGFGAEITTGAEVTAIT
PDGEVTYSAGGREHRVGARFVLANVTPTVLAALLDEPAPPSAPGSQVKVNLMLRRLPKLRDPTVTAEQAFGGTFHINETL
SQLDAAHDRAAAGEVPQPLPCEIYCHSLNDPTILSDELRAAGAQTLTVFGLHTPHSLLAHGDDDRMRNTLTSAVLTSLNS
VLAEPIHDVVMEDAAGRLCIETKTTTDLEHSLNMTGGNIFHGGLQWPFAEADDPLDTAAQRWGVATRHPRILLCGSGSRR
GGGVSGIGGHNAAMAVLDS

Sequences:

>Translated_499_residues
MVAAAYLARAGRRVQMLERLDHVGGAAVSAHAFDGVDARLSRYSYLVSLLPRRIVDDLGARIRLVKRRYSSYTPDPATGG
HTGLLIGPTSTFDAVGAAADEAGFTDFYHRFRTVTERLWPTLTAPLMTREQIRRHVLSGADDQAWRAVTETPIGAAITAA
AHSDLVRGVMATDALIGTFARTDDPSLVQNICFLYHLLGGGTGDWDVPVGGMGAVSGALAAAAAGFGAEITTGAEVTAIT
PDGEVTYSAGGREHRVGARFVLANVTPTVLAALLDEPAPPSAPGSQVKVNLMLRRLPKLRDPTVTAEQAFGGTFHINETL
SQLDAAHDRAAAGEVPQPLPCEIYCHSLNDPTILSDELRAAGAQTLTVFGLHTPHSLLAHGDDDRMRNTLTSAVLTSLNS
VLAEPIHDVVMEDAAGRLCIETKTTTDLEHSLNMTGGNIFHGGLQWPFAEADDPLDTAAQRWGVATRHPRILLCGSGSRR
GGGVSGIGGHNAAMAVLDS
>Mature_499_residues
MVAAAYLARAGRRVQMLERLDHVGGAAVSAHAFDGVDARLSRYSYLVSLLPRRIVDDLGARIRLVKRRYSSYTPDPATGG
HTGLLIGPTSTFDAVGAAADEAGFTDFYHRFRTVTERLWPTLTAPLMTREQIRRHVLSGADDQAWRAVTETPIGAAITAA
AHSDLVRGVMATDALIGTFARTDDPSLVQNICFLYHLLGGGTGDWDVPVGGMGAVSGALAAAAAGFGAEITTGAEVTAIT
PDGEVTYSAGGREHRVGARFVLANVTPTVLAALLDEPAPPSAPGSQVKVNLMLRRLPKLRDPTVTAEQAFGGTFHINETL
SQLDAAHDRAAAGEVPQPLPCEIYCHSLNDPTILSDELRAAGAQTLTVFGLHTPHSLLAHGDDDRMRNTLTSAVLTSLNS
VLAEPIHDVVMEDAAGRLCIETKTTTDLEHSLNMTGGNIFHGGLQWPFAEADDPLDTAAQRWGVATRHPRILLCGSGSRR
GGGVSGIGGHNAAMAVLDS

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=549, Percent_Identity=27.6867030965392, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17540238, Length=545, Percent_Identity=27.5229357798165, Blast_Score=133, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52690; Mature: 52690

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAAAYLARAGRRVQMLERLDHVGGAAVSAHAFDGVDARLSRYSYLVSLLPRRIVDDLGA
CCHHHHHHHCCCHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIRLVKRRYSSYTPDPATGGHTGLLIGPTSTFDAVGAAADEAGFTDFYHRFRTVTERLWP
HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
TLTAPLMTREQIRRHVLSGADDQAWRAVTETPIGAAITAAAHSDLVRGVMATDALIGTFA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RTDDPSLVQNICFLYHLLGGGTGDWDVPVGGMGAVSGALAAAAAGFGAEITTGAEVTAIT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEC
PDGEVTYSAGGREHRVGARFVLANVTPTVLAALLDEPAPPSAPGSQVKVNLMLRRLPKLR
CCCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCEEHHHHHHHCCCCC
DPTVTAEQAFGGTFHINETLSQLDAAHDRAAAGEVPQPLPCEIYCHSLNDPTILSDELRA
CCCCCHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEHHHHHH
AGAQTLTVFGLHTPHSLLAHGDDDRMRNTLTSAVLTSLNSVLAEPIHDVVMEDAAGRLCI
CCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
ETKTTTDLEHSLNMTGGNIFHGGLQWPFAEADDPLDTAAQRWGVATRHPRILLCGSGSRR
ECCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCC
GGGVSGIGGHNAAMAVLDS
CCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MVAAAYLARAGRRVQMLERLDHVGGAAVSAHAFDGVDARLSRYSYLVSLLPRRIVDDLGA
CCHHHHHHHCCCHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIRLVKRRYSSYTPDPATGGHTGLLIGPTSTFDAVGAAADEAGFTDFYHRFRTVTERLWP
HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
TLTAPLMTREQIRRHVLSGADDQAWRAVTETPIGAAITAAAHSDLVRGVMATDALIGTFA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RTDDPSLVQNICFLYHLLGGGTGDWDVPVGGMGAVSGALAAAAAGFGAEITTGAEVTAIT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEC
PDGEVTYSAGGREHRVGARFVLANVTPTVLAALLDEPAPPSAPGSQVKVNLMLRRLPKLR
CCCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCEEHHHHHHHCCCCC
DPTVTAEQAFGGTFHINETLSQLDAAHDRAAAGEVPQPLPCEIYCHSLNDPTILSDELRA
CCCCCHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEHHHHHH
AGAQTLTVFGLHTPHSLLAHGDDDRMRNTLTSAVLTSLNSVLAEPIHDVVMEDAAGRLCI
CCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
ETKTTTDLEHSLNMTGGNIFHGGLQWPFAEADDPLDTAAQRWGVATRHPRILLCGSGSRR
ECCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCC
GGGVSGIGGHNAAMAVLDS
CCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]